FFCP PHASE1:Hg19::chr10:128077034..128077055,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8038 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |||
|TSSclassifier=strong | |||
|UniProt=O43184,Q5JRP2 | |||
|association_with_transcript=-10bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_ADAM12_5end | |||
|id=chr10:128077034..128077055,- | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-36!180;CL:0000057!3.33e-19!75;CL:0000680!3.53e-15!57;CL:0000056!3.53e-15!57;CL:0000355!3.53e-15!57;CL:0000183!2.50e-14!59;CL:0000187!6.73e-14!54;CL:0000393!7.94e-13!60;CL:0000211!7.94e-13!60;CL:0000192!7.11e-12!42;CL:0000514!7.11e-12!42;CL:0000048!1.68e-11!430;CL:0000723!8.39e-11!436;CL:0000359!2.04e-10!32;CL:0000034!2.06e-10!444;CL:0002620!4.66e-09!23;CL:0002334!5.74e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.51e-13;55!CL:0000723;7.50e-13;61!CL:0000048;1.44e-12;58!CL:0000359;1.16e-11;32!CL:0002620;1.04e-10;23!CL:0000192;3.33e-10;43!CL:0000034;4.84e-10;69!CL:0002320;3.42e-09;188!CL:0000187;6.36e-09;55!CL:0000393;3.45e-08;61!CL:0000211;3.45e-08;61!CL:0000057;4.91e-08;73!CL:0002334;5.23e-08;12!CL:0000499;1.25e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.32e-21,427;CL:0000723,3.29e-20,433;CL:0000057,4.75e-20,76;CL:0000034,2.38e-19,441;CL:0000680,1.34e-17,58;CL:0000056,1.34e-17,58;CL:0000355,1.34e-17,58;CL:0000187,4.52e-16,55;CL:0000393,6.27e-15,61;CL:0000211,6.27e-15,61;CL:0000192,3.00e-14,43;CL:0000514,3.00e-14,43;CL:0000359,3.43e-12,32;CL:0002620,8.64e-11,23;CL:0002320,5.30e-10,361;CL:0000219,2.37e-08,386;CL:0000134,2.64e-08,354;CL:0002334,4.67e-08,12;CL:0000499,1.05e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;3.33e-10;43!CL:0000355;2.68e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!3.02e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.16e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.28e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.83e-17!83;UBERON:0002329!5.83e-17!83;UBERON:0003077!5.83e-17!83;UBERON:0003059!5.83e-17!83;UBERON:0007282!5.83e-17!83;UBERON:0009618!5.83e-17!83;UBERON:0007285!5.83e-17!83;UBERON:0004290!2.31e-16!70;UBERON:0001134!1.34e-14!61;UBERON:0002036!1.34e-14!61;UBERON:0003082!1.34e-14!61;UBERON:0002385!3.19e-14!63;UBERON:0001015!3.19e-14!63;UBERON:0000383!3.19e-14!63;UBERON:0000486!6.16e-13!82;UBERON:0000475!2.89e-09!365;UBERON:0002199!1.84e-08!45;UBERON:0002416!1.84e-08!45;UBERON:0005256!2.95e-07!143;UBERON:0001013!3.42e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.04e-09;31!UBERON:0001015;3.04e-09;31!UBERON:0000383;3.04e-09;31!UBERON:0002384;1.61e-08;198!UBERON:0001013;3.28e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.50e-19,71;UBERON:0003059,6.50e-19,71;UBERON:0007282,6.50e-19,71;UBERON:0004290,6.50e-19,71;UBERON:0009618,6.50e-19,71;UBERON:0007524,1.10e-18,73;UBERON:0003077,2.44e-18,72;UBERON:0007285,2.44e-18,72;UBERON:0001134,8.63e-17,62;UBERON:0002036,8.63e-17,62;UBERON:0003082,8.63e-17,62;UBERON:0007503,2.52e-16,78;UBERON:0002385,1.17e-15,64;UBERON:0001015,1.17e-15,64;UBERON:0000383,1.17e-15,64;UBERON:0000486,1.19e-14,83;UBERON:0002384,3.04e-10,371;UBERON:0002199,3.63e-09,46;UBERON:0002416,3.63e-09,46;UBERON:0001013,2.52e-08,14;UBERON:0005256,5.45e-08,122;UBERON:0001637,7.54e-08,42;UBERON:0003509,7.54e-08,42;UBERON:0004572,7.54e-08,42;UBERON:0003104,1.08e-07,160;UBERON:0009142,1.08e-07,160;UBERON:0004573,3.38e-07,33;UBERON:0004571,3.38e-07,33;UBERON:0002097,5.04e-07,41 | |||
|phase1_expression=12.1724514111273,25.692062866918,29.177561647866,5.00366491765652,18.7723659659461,13.9574163856059,12.6649939084155,46.1155507601587,6.52964070499596,0.245733936501509,0.697801167972428,0,0,12.9954670608049,23.529213676682,12.101852636132,16.2727522566474,9.49403117503585,19.0293791528298,47.1553652434098,37.7401278801868,60.810215966749,16.3154512664702,32.8498620174922,10.5455817259634,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,2.43687284041983,0,0.768547918354051,0,0,0,0,0,0,0,0.566546713487831,0.766440987203842,0,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.76791966692651,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0.670700859703636,0.255725123687061,24.5778623621505,10.0267582127178,33.3146993609895,73.9615930757522,30.6579968290661,16.6381278208759,19.7339163741682,4.30390449896318,0.785874452986276,0,0,1.9472843619281,0.696518949197069,1.86141144726411,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0.71153252537342,0,0,0.760272105718513,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,45.7214195559693,11.6500070731413,15.4918741551466,141.123617408416,25.5361235182817,4.48542080113846,16.0123493594557,21.4600767122929,3.11211035399766,1.34710672069688,0.490385709340376,177.996334910439,170.54807364608,0.468642863667593,4.68240115245481,2.85235910772225,1.64393548606981,4.22764195117554,4.69431538667581,3.79217178096071,0.816616685019573,0.859840221182376,2.58314452939414,7.12801714369232,4.45080472701402,32.765809029769,9.3420358436111,0.673344455816265,2.37725187756732,0.554128230968366,25.0217243902078,3.98434134538726,5.55880817954408,1.92834711372036,56.1489559706138,30.9658213786923,68.665935975698,79.5241404623666,46.0644805695822,33.2356296658862,18.4255687768274,76.7932311697761,68.1084666076778,36.8553310396407,29.5480174641781,16.4878977955188,55.7365060251085,24.1805035746337,15.9386956771858,0.386521706326594,0,0,0.121973706129595,0.132529768321485,1.2781333715647,3.31715376049185,0.756962552626885,0.36497735907583,7.8224766164908,19.2972281457866,2.76269842704961,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,5.7620361586396,11.7606969108434,0,0,0,0,0,18.5293235122408,0,0,0,0,0.325808305310325,0,7.21656710126366,5.33279862885353,13.0323650601762,0.433099343283221,0,0,0,0,0,0,0.148631162288728,0,0.503946384596579,0.141775097242386,0,0.290633938513962,0,172.43213326358,39.8859406079914,6.01251535068239,3.02651902175619,7.5745460055828,1.46045156871989,0,0,0,1.23392991243988,6.30720421472227,0.285826432630578,26.3508048211598,34.8768055066624,44.00297149257,247.038248813113,3.57656445851882,24.513779824124,74.1967345271789,42.6430491336601,3.34369586540785,5.67396528093113,3.19706614819319,0.857867961948885,2.17048642156577,2.46972101034231,11.4007664502807,0,3.95975936466715,4.52159065589379,16.5591357134056,1.19967589418468,0,0,0,89.3800710983603,64.3226840671038,1.42636905040718,13.0303176000821,50.3416990248439,23.8151081109061,0,1.37921532141349,1.94064817373566,0,25.6635570464688,5.20559415430487,3.86644406388848,3.68535783735567,3.18969375826582,0,0,0.414415513436035,13.127989613948,15.50528615285,3.25518028439683,26.6202702759433,78.8656130483455,23.0245525949545,33.2681618579305,7.52365249319297,20.4666753650386,8.27784570340039,77.7143950286461,62.6855173041791,6.77692192851046,93.59295326719,44.6086450954113,0.620304078368662,0,0.533637789017222,0,0,1.5119514666484,12.4053903909388,28.0835411117154,46.3089155814571,41.2608060603357,23.0268262080017,69.1671860917512,2.96836132889982,46.4171178345993,68.1837025202408,28.415995980778,14.5391240171414,34.282061645688,0,0,0,42.7109747172337,62.6393617943107,7.47409165268718,0.451199612907412,0.539107359730903,1.56869953835371,1.46139224653261,2.21658420675039,0,0,0.863663664408557,0,1.62567862526312,1.00337954770971,0.254876273045038,0,0.671624264166535,0,0,0,0,0.650756789328606,885.740536123821,2.1060976908219,0.82509499920588,2.87132768998086,1.30012049207304,0,11.7938276316389,31.4259178913875,36.3803709100927,4.27293374702045,13.2126901187977,9.1360517165964,32.5565716729505,83.5120494366396,0,0.384380134730212,0.765676274967505,0,8.83206543664843,52.8884742675475,5.5762981612848,7.70083950440222,9.04920251538937,3.47973196830029,8.71023829788424,13.8831140139731,27.5397193326154,13.6043152629052,6.29079639948622,1.27948895655667,2.56763392820352,6.0458617105928,6.27958912159384,8.81375042158242,62.3199057500844,29.3352881840759,9.70475911551917,7.92551605865041,22.326698180666,0,17.0599442741899,12.6780176108107,6.14249601335936,7.63589332550049,7.910568163417,1.65409603063837,1.32687795048244,4.38450885253763,2.89387767133344,5.24715801637306,21.7114103350093,13.632233916389,21.1271701899181,2.43799298746888,2.06322986127554,21.400263088875,3.19284957663538,8.86652068250189,17.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| |||
|short_description=p1@ADAM12 | |||
}} |
Revision as of 05:32, 11 January 2014
Short description: | p1@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAM12_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -10bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.32e-21 | 427 |
somatic stem cell | 3.29e-20 | 433 |
fibroblast | 4.75e-20 | 76 |
stem cell | 2.38e-19 | 441 |
muscle precursor cell | 1.34e-17 | 58 |
myoblast | 1.34e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.34e-17 | 58 |
muscle cell | 4.52e-16 | 55 |
electrically responsive cell | 6.27e-15 | 61 |
electrically active cell | 6.27e-15 | 61 |
smooth muscle cell | 3.00e-14 | 43 |
smooth muscle myoblast | 3.00e-14 | 43 |
vascular associated smooth muscle cell | 3.43e-12 | 32 |
skin fibroblast | 8.64e-11 | 23 |
connective tissue cell | 5.30e-10 | 361 |
motile cell | 2.37e-08 | 386 |
mesenchymal cell | 2.64e-08 | 354 |
preadipocyte | 4.67e-08 | 12 |
stromal cell | 1.05e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
somite | 6.50e-19 | 71 |
presomitic mesoderm | 6.50e-19 | 71 |
presumptive segmental plate | 6.50e-19 | 71 |
dermomyotome | 6.50e-19 | 71 |
trunk paraxial mesoderm | 6.50e-19 | 71 |
dense mesenchyme tissue | 1.10e-18 | 73 |
paraxial mesoderm | 2.44e-18 | 72 |
presumptive paraxial mesoderm | 2.44e-18 | 72 |
skeletal muscle tissue | 8.63e-17 | 62 |
striated muscle tissue | 8.63e-17 | 62 |
myotome | 8.63e-17 | 62 |
epithelial vesicle | 2.52e-16 | 78 |
muscle tissue | 1.17e-15 | 64 |
musculature | 1.17e-15 | 64 |
musculature of body | 1.17e-15 | 64 |
multilaminar epithelium | 1.19e-14 | 83 |
connective tissue | 3.04e-10 | 371 |
integument | 3.63e-09 | 46 |
integumental system | 3.63e-09 | 46 |
adipose tissue | 2.52e-08 | 14 |
trunk mesenchyme | 5.45e-08 | 122 |
artery | 7.54e-08 | 42 |
arterial blood vessel | 7.54e-08 | 42 |
arterial system | 7.54e-08 | 42 |
mesenchyme | 1.08e-07 | 160 |
entire embryonic mesenchyme | 1.08e-07 | 160 |
systemic artery | 3.38e-07 | 33 |
systemic arterial system | 3.38e-07 | 33 |
skin of body | 5.04e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.28e-10 | 14 |