FFCP PHASE1:Hg19::chr10:134150835..134150852,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29346 | |||
|TSSclassifier=strong | |||
|UniProt=B4DW88 | |||
|association_with_transcript=0bp_to_ENST00000432555_5end | |||
|description=CAGE_peak_4_at_LRRC27_5end | |||
|id=chr10:134150835..134150852,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.00e-09!112;CL:0000049!4.00e-09!112;CL:0000557!6.42e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.00e-18;6!CL:0002619;1.19e-14;3!CL:0000840;4.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.25e-18,6;CL:0002619,1.24e-14,3;CL:0000763,5.38e-14,108;CL:0000049,5.38e-14,108;CL:0002032,1.19e-09,161;CL:0000837,1.19e-09,161;CL:0000037,5.00e-09,168;CL:0000988,2.68e-08,177;CL:0000557,4.65e-08,67;CL:0000840,3.47e-07,5;CL:0001029,3.47e-07,5;CL:0000839,6.60e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.18e-09;31!DOID:1240;7.45e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.08e-09,31;DOID:1240,4.90e-09,39;DOID:2531,6.22e-08,51;DOID:0060083,6.22e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.12e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.00e-08,76;UBERON:0001474,3.10e-07,82;UBERON:0002405,5.08e-07,93 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,3.00219895059391,0,0.872338524100369,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,1.22400414746552,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,10.0761963407966,6.15397965436061,9.78787157009909,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.901061357049038,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,3.24547393654683,3.83085422058388,1.99436940778298,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,2.28081631715554,0.24406205754817,0,0,0.535798369704479,0,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,6.64785916435973,1.8720341211139,3.12125440806329,0,0,0,0,0,0,0,2.0251139823042,0.207328115540772,0.576479813667846,0.25248486685276,0.253991577168676,0.763976851116555,1.17217447210047,0,0.411309970813294,0,0.285826432630578,0.336393253036082,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0.164254312027618,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0.199579371432817,1.1490322207942,3.59845090630601,0,6.45833509660955,1.59764275323235,0,0,0.169291777801603,2.08764497634809,0.403599414382095,2.98092366383228,1.71752672377882,0,0,0,0,0.556812347790485,0,0,0,0,0.935702702041099,0.586032717087576,0,1.00299045849731,0,0,0,0,0,0.422008249231538,0,0,0,0,0.828851746593443,0,1.22722419002586,0,0,0.0898683511473268,0,3.06943422136123,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,2.99181027420282,0,0,0,0,0,0,0,2.26164914294305,0,0,0.884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.253243183823515,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.273810757783986,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.393915911536118,0.906574442192831,0.606631894687664,2.36225955635397,0,0,0.544813624446302,0.321506296930038,0.275078873194468,0,0.2249738915515,0,0.242998226632099,0,0.236417121897595,0.157363764404994,0.105600336519406,0.537862017998534,0,1.42939065274673,0,0,0,0,0,0,0,0.851940108927109,0.226624183040251,0.293104467356165,1.32506888912221,0,0.26446520348538,0,0,0.533937062838473,0.471612915298998,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.310482014706917,0,0,0.758245587708239,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.654261577023377,0,0,0,0.59996218756479,0,2.75543967457305,0,0.184105950251841,0,0,0,7.116437552181,0.314531883711793,0,0,0,0,0,0,0.315446980005013,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.354809480650555,0,0,0.40781839786099,0.131545547125698,0,0,0.470958557103084,0,0,0,0,0,0.285906176706625,0,1.74362138052188,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,1.3741032706134,0.609589624911347,0,0,0,0,0,0,0,0,0,0.905777061400041,1.92935395269862,1.5299169235277,0,0.490296643507811,0,0,0.297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| |||
|short_description=p4@LRRC27 | |||
}} |
Revision as of 05:39, 11 January 2014
Short description: | p4@LRRC27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432555_5end |
EntrezGene: | LRRC27 |
HGNC: | 29346 |
UniProt: | B4DW88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.25e-18 | 6 |
adult endothelial progenitor cell | 1.24e-14 | 3 |
myeloid cell | 5.38e-14 | 108 |
common myeloid progenitor | 5.38e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.19e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-09 | 161 |
hematopoietic stem cell | 5.00e-09 | 168 |
hematopoietic cell | 2.68e-08 | 177 |
granulocyte monocyte progenitor cell | 4.65e-08 | 67 |
immature conventional dendritic cell | 3.47e-07 | 5 |
common dendritic progenitor | 3.47e-07 | 5 |
myeloid lineage restricted progenitor cell | 6.60e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.00e-08 | 76 |
bone element | 3.10e-07 | 82 |
immune system | 5.08e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.08e-09 | 31 |
leukemia | 4.90e-09 | 39 |
hematologic cancer | 6.22e-08 | 51 |
immune system cancer | 6.22e-08 | 51 |