FFCP PHASE1:Hg19::chr10:88126265..88126278,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4575 | |||
|TSSclassifier=strong | |||
|UniProt=G3V186,A8KAN9,Q9ULK0 | |||
|association_with_transcript=-15bp_to_ENST00000464741,NM_017551,uc001kdl.1,uc009xsu.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GRID1_5end | |||
|id=chr10:88126265..88126278,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.92e-21;82!UBERON:0010122;2.04e-09;2!UBERON:0002532;4.27e-07;206!UBERON:0010316;4.27e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-50!115;UBERON:0001049!1.29e-36!57;UBERON:0005068!1.29e-36!57;UBERON:0006241!1.29e-36!57;UBERON:0007135!1.29e-36!57;UBERON:0000073!1.31e-34!94;UBERON:0001016!1.31e-34!94;UBERON:0001017!7.24e-34!82;UBERON:0005743!5.95e-33!86;UBERON:0000955!9.60e-32!69;UBERON:0006238!9.60e-32!69;UBERON:0002780!9.59e-30!41;UBERON:0001890!9.59e-30!41;UBERON:0006240!9.59e-30!41;UBERON:0002616!2.20e-29!59;UBERON:0003080!9.47e-29!42;UBERON:0001893!2.06e-26!34;UBERON:0002020!3.49e-26!34;UBERON:0003528!3.49e-26!34;UBERON:0002791!3.23e-25!33;UBERON:0003075!4.50e-25!86;UBERON:0007284!4.50e-25!86;UBERON:0002346!2.25e-24!90;UBERON:0001869!5.91e-24!32;UBERON:0004121!1.20e-19!169;UBERON:0000924!1.77e-19!173;UBERON:0006601!1.77e-19!173;UBERON:0000153!1.61e-18!129;UBERON:0007811!1.61e-18!129;UBERON:0000033!1.20e-17!123;UBERON:0003056!1.96e-17!61;UBERON:0002619!1.03e-16!22;UBERON:0000956!1.36e-15!25;UBERON:0000203!1.36e-15!25;UBERON:0001950!1.14e-14!20;UBERON:0002308!4.87e-13!9;UBERON:0000125!4.87e-13!9;UBERON:0000062!5.32e-12!511;UBERON:0000064!3.08e-11!219;UBERON:0009663!9.18e-11!7;UBERON:0002420!2.62e-10!9;UBERON:0007245!2.62e-10!9;UBERON:0010009!2.62e-10!9;UBERON:0010011!2.62e-10!9;UBERON:0000454!2.62e-10!9;UBERON:0000200!5.39e-09!6;UBERON:0003076!6.01e-09!15;UBERON:0003057!6.01e-09!15;UBERON:0000477!1.04e-08!286;UBERON:0000922!2.55e-08!612;UBERON:0002298!3.31e-08!8;UBERON:0000468!3.48e-08!659;UBERON:0002050!5.99e-08!605;UBERON:0005423!5.99e-08!605;UBERON:0001737!6.22e-08!9;UBERON:0000025!6.48e-08!194;UBERON:0000467!1.09e-07!625;UBERON:0000481!1.29e-07!347;UBERON:0000480!1.29e-07!626;UBERON:0000923!1.30e-07!604;UBERON:0005291!1.30e-07!604;UBERON:0006598!1.30e-07!604;UBERON:0002532!1.30e-07!604;UBERON:0004732!3.01e-07!13;UBERON:0000475!3.10e-07!365;UBERON:0000369!6.97e-07!4;UBERON:0002435!6.97e-07!4;UBERON:0000204!6.97e-07!4;UBERON:0010082!6.97e-07!4;UBERON:0004111!7.58e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.95e-56;34!UBERON:0003528;3.72e-54;34!UBERON:0002020;3.72e-54;34!UBERON:0002791;6.89e-52;32!UBERON:0001869;8.34e-52;32!UBERON:0002780;1.86e-47;41!UBERON:0001890;1.86e-47;41!UBERON:0000073;2.12e-43;53!UBERON:0002616;2.12e-43;53!UBERON:0002619;4.25e-40;22!UBERON:0001950;6.53e-39;20!UBERON:0000125;2.36e-35;9!UBERON:0002308;2.36e-35;9!UBERON:0000956;5.11e-35;25!UBERON:0000203;5.11e-35;25!UBERON:0001017;5.32e-31;75!UBERON:0000955;1.03e-30;68!UBERON:0009663;1.33e-28;7!UBERON:0002420;2.87e-28;9!UBERON:0007245;2.87e-28;9!UBERON:0010009;2.87e-28;9!UBERON:0010011;2.87e-28;9!UBERON:0000454;2.87e-28;9!UBERON:0000200;2.65e-23;6!UBERON:0002298;4.96e-22;6!UBERON:0001016;5.63e-22;83!UBERON:0000369;4.08e-17;4!UBERON:0002435;4.08e-17;4!UBERON:0000204;4.08e-17;4!UBERON:0007023;3.13e-15;114!UBERON:0004732;1.89e-13;13!UBERON:0005383;2.31e-13;3!UBERON:0005382;2.31e-13;3!UBERON:0001872;5.80e-13;5!UBERON:0001870;2.96e-12;3!UBERON:0000988;6.92e-12;3!UBERON:0001896;6.92e-12;3!UBERON:0005290;6.92e-12;3!UBERON:0004733;1.00e-10;12!UBERON:0002028;1.00e-10;12!UBERON:0011216;1.74e-10;132!UBERON:0001897;1.77e-09;2!UBERON:0001875;1.77e-09;2!UBERON:0006514;1.77e-09;2!UBERON:0010225;1.77e-09;2!UBERON:0001873;2.04e-09;2!UBERON:0005162;2.04e-09;2!UBERON:0000122;2.04e-09;2!UBERON:0001871;2.82e-09;6!UBERON:0002771;7.39e-09;2!UBERON:0002148;1.74e-08;2!UBERON:0002702;1.74e-08;2!UBERON:0006331;1.74e-08;2!UBERON:0009662;1.74e-08;2!UBERON:0002021;9.57e-08;5!UBERON:0000349;1.59e-07;5!UBERON:0010314;8.77e-07;132 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,0.532685175939381,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,1.40669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,2.50473865036998,1.99613798001194,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0.520874984799877,3.54296554325536,2.77371808838438,0,0.442317039724898,0.886642856860642,1.09692698576986,0,0,1.23120413606075,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,1.22206028986725,0,0,0,3.84186457989859,0,1.87411556580271,0,0.19566461893209,0.485560759068186,1.18375320854817,0,0.61214552326098,0.63186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.698906672968121,0,0,0.0730893170861856,0.0821154570532092,0.387956065953678,0,0.677942222341597,0,0,2.91229661397042,0,0.240476460754601,0.85381197895741,0,0,0.229073192331831,0,0,0,0,0.815425236441684,1.569042694685,0,0,4.80336230967832,2.73810757783986,0,0,0,0.558564802544508,0.687481272035051,0,0.599037001496973,0,0.223171457441873,0.739018197353989,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,1.36203406111576,0,0,0,0,0,2.36923270966296,0,0,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.80996138906171,1.19009341568421,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.3184990331373,1.6274820991845,1.14681839138014,1.10929051536852,1.67660287941735,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0.512483037175893,0.345430341731199,0,1.52084279766904,0,0,0.163565394255844,0,0,0,0,1.38699248602383,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0.764467467344097,0,0.425149840203366,0,0,0.318004350653419,0,0,0,0,2.82608590424422,0,1.91560630868582,2.2562800066483,0,2.97376185596137,1.61475645631851,2.85538840518309,0,0.11796972334774,0,0,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0,0,2.16120270778863,1.56215619722769,1.86018116851066,2.28296916698065,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,1.2914249265598,3.7490480930824,0,0,0.156986185701028,3.45654297815204,0,0.913158720509496,0,0,0.929195074296532,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,1.94284397223656,0.701818390386317,0,0.118920090777569,0,0.109940516745429,0,0.385870790539723,0,0,0,0.942706188406504,2.35570160537934,0.891139200981258,0.4226557275834,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,2.00675416412032,0,3.60354898011848,0.436350690340377,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,0.682008283964155,0.267964130156178,4.97501663675268,2.58582489654738,0.852935927603924,0.714193294391221,0.0645889098360061,0,0,0.763765899337979,1.21270313374932,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0.808426818959282,0,1.58913877437726,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p4@GRID1 | |||
}} |
Revision as of 03:54, 11 January 2014
Short description: | p4@GRID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRID1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -15bp_to_ENST00000464741, NM_017551, uc001kdl.1, uc009xsu.1_5end |
EntrezGene: | GRID1 |
HGNC: | 4575 |
UniProt: | G3V186A8KAN9Q9ULK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data