FFCP PHASE1:Hg19::chr10:95517748..95517790,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6572 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=65bp_to_uc001kje.2,uc009xui.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_LGI1_5end | |||
|id=chr10:95517748..95517790,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.40e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.70e-21;82!UBERON:0006215;2.70e-10;3!UBERON:0006241;2.84e-09;3!UBERON:0003057;2.84e-09;3!UBERON:0010122;8.26e-08;2!UBERON:0002532;1.68e-07;206!UBERON:0010316;1.68e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-74!57;UBERON:0005068!1.29e-74!57;UBERON:0006241!1.29e-74!57;UBERON:0007135!1.29e-74!57;UBERON:0002616!6.81e-68!59;UBERON:0005743!3.01e-66!86;UBERON:0001017!3.54e-65!82;UBERON:0000073!9.83e-65!94;UBERON:0001016!9.83e-65!94;UBERON:0000955!3.56e-63!69;UBERON:0006238!3.56e-63!69;UBERON:0003075!3.16e-59!86;UBERON:0007284!3.16e-59!86;UBERON:0002780!5.98e-59!41;UBERON:0001890!5.98e-59!41;UBERON:0006240!5.98e-59!41;UBERON:0003080!2.76e-57!42;UBERON:0002346!7.64e-56!90;UBERON:0001893!1.46e-50!34;UBERON:0002020!1.59e-50!34;UBERON:0003528!1.59e-50!34;UBERON:0007023!4.46e-49!115;UBERON:0002791!1.03e-48!33;UBERON:0001869!2.27e-47!32;UBERON:0003056!1.64e-44!61;UBERON:0002619!9.18e-40!22;UBERON:0000153!1.03e-39!129;UBERON:0007811!1.03e-39!129;UBERON:0000033!2.87e-39!123;UBERON:0001950!4.59e-36!20;UBERON:0004121!1.77e-34!169;UBERON:0000956!2.56e-34!25;UBERON:0000203!2.56e-34!25;UBERON:0000924!2.99e-33!173;UBERON:0006601!2.99e-33!173;UBERON:0002420!8.02e-18!9;UBERON:0007245!8.02e-18!9;UBERON:0010009!8.02e-18!9;UBERON:0010011!8.02e-18!9;UBERON:0000454!8.02e-18!9;UBERON:0002308!1.10e-17!9;UBERON:0000125!1.10e-17!9;UBERON:0003076!1.25e-17!15;UBERON:0003057!1.25e-17!15;UBERON:0009663!2.46e-14!7;UBERON:0000025!4.40e-13!194;UBERON:0000200!5.90e-13!6;UBERON:0004733!5.98e-13!12;UBERON:0002028!5.98e-13!12;UBERON:0007277!5.98e-13!12;UBERON:0001871!3.12e-12!7;UBERON:0002298!5.08e-12!8;UBERON:0004732!8.73e-12!13;UBERON:0000475!3.08e-11!365;UBERON:0002021!7.88e-11!5;UBERON:0001872!9.61e-11!5;UBERON:0000349!1.24e-10!5;UBERON:0000064!1.09e-09!219;UBERON:0001894!1.30e-09!7;UBERON:0006222!1.30e-09!7;UBERON:0000369!1.76e-09!4;UBERON:0002435!1.76e-09!4;UBERON:0000204!1.76e-09!4;UBERON:0010082!1.76e-09!4;UBERON:0004111!5.13e-09!241;UBERON:0000062!8.18e-09!511;UBERON:0000483!1.16e-08!309;UBERON:0000481!1.89e-08!347;UBERON:0000119!1.95e-08!312;UBERON:0000477!2.49e-08!286;UBERON:0000922!4.01e-08!612;UBERON:0002680!4.66e-08!9;UBERON:0001895!4.66e-08!9;UBERON:0010092!4.66e-08!9;UBERON:0005383!1.19e-07!3;UBERON:0005382!1.19e-07!3;UBERON:0002771!1.69e-07!3;UBERON:0000468!3.26e-07!659;UBERON:0001896!4.32e-07!3;UBERON:0005290!4.32e-07!3;UBERON:0010096!4.32e-07!3;UBERON:0000988!4.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.82e-66;34!UBERON:0003528;9.16e-66;34!UBERON:0002020;9.16e-66;34!UBERON:0001869;2.87e-65;32!UBERON:0002791;5.83e-65;32!UBERON:0002780;3.83e-62;41!UBERON:0001890;3.83e-62;41!UBERON:0002619;9.18e-61;22!UBERON:0000073;1.52e-60;53!UBERON:0002616;1.52e-60;53!UBERON:0001950;5.27e-55;20!UBERON:0000956;5.01e-53;25!UBERON:0000203;5.01e-53;25!UBERON:0001017;5.61e-41;75!UBERON:0000955;2.01e-38;68!UBERON:0001016;5.18e-32;83!UBERON:0002420;1.20e-26;9!UBERON:0007245;1.20e-26;9!UBERON:0010009;1.20e-26;9!UBERON:0010011;1.20e-26;9!UBERON:0000454;1.20e-26;9!UBERON:0000125;1.72e-26;9!UBERON:0002308;1.72e-26;9!UBERON:0009663;2.47e-21;7!UBERON:0004733;9.47e-20;12!UBERON:0002028;9.47e-20;12!UBERON:0000200;4.24e-19;6!UBERON:0002298;2.23e-18;6!UBERON:0004732;4.35e-18;13!UBERON:0007023;4.31e-17;114!UBERON:0002021;8.27e-16;5!UBERON:0001872;1.07e-15;5!UBERON:0000349;1.72e-15;5!UBERON:0001871;3.04e-15;6!UBERON:0011216;4.53e-14;132!UBERON:0000369;9.46e-14;4!UBERON:0002435;9.46e-14;4!UBERON:0000204;9.46e-14;4!UBERON:0002680;3.98e-12;9!UBERON:0001895;3.98e-12;9!UBERON:0005383;6.20e-11;3!UBERON:0005382;6.20e-11;3!UBERON:0001870;1.17e-10;3!UBERON:0001894;2.73e-10;7!UBERON:0001896;4.16e-10;3!UBERON:0005290;4.16e-10;3!UBERON:0000988;5.48e-10;3!UBERON:0010314;2.52e-09;132!UBERON:0002240;2.84e-09;3!UBERON:0005174;2.84e-09;3!UBERON:0001137;2.84e-09;3!UBERON:0001873;8.26e-08;2!UBERON:0002702;1.22e-07;2!UBERON:0002771;1.26e-07;2!UBERON:0001954;2.47e-07;2!UBERON:0003022;2.47e-07;2!UBERON:0002421;2.47e-07;2!UBERON:0002600;2.47e-07;2!UBERON:0001876;5.26e-07;2!UBERON:0001897;5.34e-07;2!UBERON:0010225;5.34e-07;2!UBERON:0001875;5.67e-07;2!UBERON:0006514;5.67e-07;2!UBERON:0002148;7.55e-07;2!UBERON:0006331;7.55e-07;2!UBERON:0009662;7.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.93e-114,56;UBERON:0005068,1.93e-114,56;UBERON:0006241,1.93e-114,56;UBERON:0007135,1.93e-114,56;UBERON:0000073,2.26e-106,53;UBERON:0002616,2.26e-106,53;UBERON:0000955,2.67e-91,68;UBERON:0006238,2.67e-91,68;UBERON:0001017,3.57e-89,81;UBERON:0002780,6.65e-87,41;UBERON:0001890,6.65e-87,41;UBERON:0003080,6.65e-87,41;UBERON:0006240,6.65e-87,41;UBERON:0003075,1.51e-81,82;UBERON:0007284,1.51e-81,82;UBERON:0001016,3.34e-79,89;UBERON:0001893,2.36e-78,34;UBERON:0003528,2.71e-78,34;UBERON:0002020,2.71e-78,34;UBERON:0002346,3.17e-77,86;UBERON:0001869,2.13e-73,32;UBERON:0002791,6.48e-73,32;UBERON:0010371,7.62e-62,104;UBERON:0002619,7.18e-61,22;UBERON:0003056,5.56e-59,61;UBERON:0001950,3.89e-55,20;UBERON:0007023,7.87e-54,114;UBERON:0000956,4.04e-53,25;UBERON:0000203,4.04e-53,25;UBERON:0010314,1.81e-48,132;UBERON:0004121,4.20e-41,171;UBERON:0000924,4.20e-41,171;UBERON:0006601,4.20e-41,171;UBERON:0011216,4.04e-31,223;UBERON:0003076,5.43e-27,15;UBERON:0003057,5.43e-27,15;UBERON:0002420,1.25e-26,9;UBERON:0007245,1.25e-26,9;UBERON:0010009,1.25e-26,9;UBERON:0010011,1.25e-26,9;UBERON:0000454,1.25e-26,9;UBERON:0000125,2.04e-26,9;UBERON:0002308,2.04e-26,9;UBERON:0000025,3.09e-25,192;UBERON:0009663,3.06e-21,7;UBERON:0004733,1.00e-19,12;UBERON:0002028,1.00e-19,12;UBERON:0007277,1.00e-19,12;UBERON:0000200,4.11e-19,6;UBERON:0004111,7.12e-19,240;UBERON:0002298,2.23e-18,6;UBERON:0004732,4.58e-18,13;UBERON:0002021,7.79e-16,5;UBERON:0001872,1.06e-15,5;UBERON:0000349,1.57e-15,5;UBERON:0001871,2.72e-15,6;UBERON:0000483,6.61e-14,306;UBERON:0000369,9.32e-14,4;UBERON:0002435,9.32e-14,4;UBERON:0000204,9.32e-14,4;UBERON:0010082,9.32e-14,4;UBERON:0000119,1.18e-13,309;UBERON:0002680,4.07e-12,9;UBERON:0001895,4.07e-12,9;UBERON:0010092,4.07e-12,9;UBERON:0005383,6.01e-11,3;UBERON:0005382,6.01e-11,3;UBERON:0001870,1.10e-10,3;UBERON:0001894,2.93e-10,7;UBERON:0006222,2.93e-10,7;UBERON:0001896,4.36e-10,3;UBERON:0005290,4.36e-10,3;UBERON:0010096,4.36e-10,3;UBERON:0000988,5.24e-10,3;UBERON:0002240,3.06e-09,3;UBERON:0005174,3.06e-09,3;UBERON:0001137,3.06e-09,3;UBERON:0000922,2.18e-08,592;UBERON:0001873,8.13e-08,2;UBERON:0010122,8.13e-08,2;UBERON:0002702,1.16e-07,2;UBERON:0002771,1.24e-07,2;UBERON:0001954,2.63e-07,2;UBERON:0003022,2.63e-07,2;UBERON:0002421,2.63e-07,2;UBERON:0002600,2.63e-07,2;UBERON:0000923,3.41e-07,560;UBERON:0010316,3.41e-07,560;UBERON:0005291,3.41e-07,560;UBERON:0006598,3.41e-07,560;UBERON:0010317,3.41e-07,560;UBERON:0002532,3.41e-07,560;UBERON:0001876,4.45e-07,2;UBERON:0002050,4.80e-07,564;UBERON:0005423,4.95e-07,581;UBERON:0001897,5.34e-07,2;UBERON:0010225,5.34e-07,2;UBERON:0001875,5.85e-07,2;UBERON:0005253,5.85e-07,2;UBERON:0006514,5.85e-07,2;UBERON:0002148,7.22e-07,2;UBERON:0006331,7.22e-07,2;UBERON:0009662,7.22e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.662648841607426,0.929551542956147,2.38420426535352,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72099047260006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,5.3453642549875,0,5.96488588659779,4.92342957436795,0,0,0,0,0,0,6.85200172764437,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,8.81296932537587,0,0,0,0,0,0,0,0,0,0,14.1718621730214,11.6978545466646,9.15490417902499,16.3657304698212,3.54657142744257,5.04586413454137,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,2.29163852134302,0.802577647298789,7.96499115466153,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,10.8261461084553,0,0,0,0,0,1.14536596165916,0,0,0,0,0,0,0,0,7.20504346451747,2.32739144116388,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,9.54275627771164,5.31193283835145,0,0,0,0,0,7.59369458225308,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39562051629272,3.9669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,12.4466790200002,13.019856793476,10.8947747181114,5.43552352530576,5.02980863825206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84853991371077,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0.127894371303652,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0,2.1160556621441,0,7.25790243589993,21.2544864488377,10.535834697772,9.84558548355624,1.51243017733031,5.87836645945852,7.2664040534333,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,7.15898396954983,14.0594057750493,10.7477134180616,8.18063951501398,1.64092442705466,0,0,0,0,0,0.672567444437648,1.21393120847326,1.36597314810779,0,0,0.171488009437418,20.8667080238873,5.72223129996787,0,0,0,16.4971369411802,0,0,0,0,2.43020250200632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,4.6392577253528,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,3.72986087518396,3.26751040359795,2.113278637917,0,0,0,0,0,0,0,0,0,1.00337708206016,0,4.01149792126397,1.74540276136151,0.5290268405154,0,0,0,0,0.98339014767326,4.56114603641173,0.305966489225945,1.87052183685892,0.18378979906969,3.25919801080088,0.227336094654718,0,6.63335551567024,3.62015485516633,0.852935927603924,0.476128862927481,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LGI1 | |||
}} |
Revision as of 04:14, 11 January 2014
Short description: | p3@LGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGI1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 65bp_to_uc001kje.2, uc009xui.2_5end |
EntrezGene: | LGI1 |
HGNC: | 6572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data