FFCP PHASE1:Hg19::chr12:127545156..127545162,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr12:127545156..127545162,+ | |||
|id=chr12:127545156..127545162,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.16e-09;4!CL:0002253;4.16e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.99e-09,4;CL:0002253,4.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.22e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.59e-08;2!DOID:1036;3.48e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.05e-13,143;DOID:162,1.76e-13,235;DOID:14566,4.98e-13,239;DOID:1909,1.50e-08,2;DOID:1036,3.69e-08,8;DOID:305,5.15e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.87e-11!14;UBERON:0000158!3.87e-11!14;UBERON:0000059!1.67e-10!11;UBERON:0004907!3.89e-10!5;UBERON:0005409!6.76e-10!35;UBERON:0001052!8.01e-09!4;UBERON:0004119!1.11e-08!169;UBERON:0000925!1.11e-08!169;UBERON:0006595!1.11e-08!169;UBERON:0000160!1.39e-07!27;UBERON:0001155!1.96e-07!9;UBERON:0001007!3.36e-07!155;UBERON:0001555!3.36e-07!155;UBERON:0007026!3.36e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;7.20e-10;4!UBERON:0000160;9.24e-10;17!UBERON:0005409;1.51e-09;22!UBERON:0001242;2.16e-09;4!UBERON:0001262;2.16e-09;4!UBERON:0004786;2.16e-09;4!UBERON:0004808;2.16e-09;4!UBERON:0001277;2.16e-09;4!UBERON:0000059;8.70e-09;11!UBERON:0004907;5.68e-08;5!UBERON:0001155;4.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.76e-10,4;UBERON:0000160,7.98e-10,17;UBERON:0001242,1.99e-09,4;UBERON:0001262,1.99e-09,4;UBERON:0004786,1.99e-09,4;UBERON:0004808,1.99e-09,4;UBERON:0001277,1.99e-09,4;UBERON:0000059,7.93e-09,11;UBERON:0005409,2.46e-08,25;UBERON:0004907,6.02e-08,5;UBERON:0001155,4.20e-07,9;UBERON:0001046,5.13e-07,19 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00091096084402,0.824420233907511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.63497894292169,1.14596527667483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,3.02148623979056,0,2.76242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808729926293264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3581770625015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,4.11709188898084,0.146508179271894,0,2.11742430127209,0,3.34242278632766,0.296964680832639,3.68592842519078,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,3.07303986298317,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.683652335082007,0,0,2.39024218228418,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,8.34703944283569,7.25431376975636,6.71286347903371,1.13852239634511,0,8.22892451659305,0,2.12029607150911,21.2060866947249,0.995261931078505,1.94606641907346,2.4441205797345,0,0,0,0,0,0,0,8.21791399514777,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,4.02156551738102,0,20.6763958544337,0,0,0,0,0,0,0.0969890164884194,0,0,22.7489594913607,15.4997397128332,0,0.195551382734803,5.53095859735583,0.640358984218058,1.19885765749278,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,13.9795139432945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,3.9659232032044,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,1.09937867375164,0,0,0,0,0,0,0,0,3.03298235083296,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29326894192489,3.93236654005951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60684897942564,0,0,0,0,0,0,0,0,0,0,4.6129427695482,0,0,0,0.381382095467167,0,0,0,34.894976885709,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,6.45142130974001,0,0,15.4149689822584,0.913158720509496,0,0,0.142953088353313,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2109103423179,0,0.475680363110274,0,0,70.9525364763366,5.78806185809585,0.437119121007915,0,0,0,0,0,0,0,0.563903507879121,0.773494655682926,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,1.51399709802095,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,15.6984607612859,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,3.09509303045375,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:127545156..127545162,+ | |||
}} |
Revision as of 16:41, 11 January 2014
Short description: | p@chr12:127545156..127545162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:127545156..127545162, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.99e-09 | 4 |
epithelial cell of large intestine | 4.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 7.76e-10 | 4 |
intestine | 7.98e-10 | 17 |
intestinal mucosa | 1.99e-09 | 4 |
wall of intestine | 1.99e-09 | 4 |
gastrointestinal system mucosa | 1.99e-09 | 4 |
gastrointestinal system epithelium | 1.99e-09 | 4 |
intestinal epithelium | 1.99e-09 | 4 |
large intestine | 7.93e-09 | 11 |
gastrointestinal system | 2.46e-08 | 25 |
lower digestive tract | 6.02e-08 | 5 |
colon | 4.20e-07 | 9 |
hindgut | 5.13e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.05e-13 | 143 |
cancer | 1.76e-13 | 235 |
disease of cellular proliferation | 4.98e-13 | 239 |
melanoma | 1.50e-08 | 2 |
chronic leukemia | 3.69e-08 | 8 |
carcinoma | 5.15e-08 | 106 |