FFCP PHASE1:Hg19::chr12:130618024..130618032,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr12:130618024..130618032,+ | |||
|id=chr12:130618024..130618032,+ | |||
|ontology_enrichment_celltype=CL:0000214!9.66e-09!3;CL:0002178!1.12e-08!3;CL:0002541!1.51e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.34e-23!1;DOID:1357!1.34e-23!1;DOID:3119!8.46e-15!14;DOID:3493!2.32e-12!2;DOID:4929!3.24e-12!2;DOID:5409!6.50e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.55e-98;1!DOID:1357;2.55e-98;1!DOID:5409;5.56e-26;4!DOID:0050615;7.63e-26;16!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.55e-98,1;DOID:1357,2.55e-98,1;DOID:5409,5.56e-26,4;DOID:0050615,7.63e-26,16;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.34e-23!1;UBERON:0001825!1.34e-23!1;UBERON:0006834!3.28e-23!1;UBERON:0004913!5.13e-23!1;UBERON:0003703!5.13e-23!1;UBERON:0001174!5.13e-23!1;UBERON:0004914!5.13e-23!1;UBERON:0006915!9.66e-09!3;UBERON:0002018!9.66e-09!3;UBERON:0002217!9.66e-09!3;UBERON:0007616!9.66e-09!3;UBERON:0000476!1.51e-08!3;UBERON:0000920!1.51e-08!3;UBERON:0002394!9.63e-07!4;UBERON:0003928!9.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.55e-98;1!UBERON:0001825;2.55e-98;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.55e-98,1;UBERON:0001825,2.55e-98,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.397901550322736,0,3.16249029709088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr12:130618024..130618032,+ | |||
}} |
Revision as of 16:43, 11 January 2014
Short description: | p@chr12:130618024..130618032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:130618024..130618032, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.55e-98 | 1 |
paranasal sinus | 2.55e-98 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.55e-98 | 1 |
maxillary sinus cancer | 2.55e-98 | 1 |
lung small cell carcinoma | 5.56e-26 | 4 |
respiratory system cancer | 7.63e-26 | 16 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |