FFCP PHASE1:Hg19::chr12:32112328..32112331,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25559 | |||
|TSSclassifier=strong | |||
|UniProt=F5H488 | |||
|association_with_transcript=-10bp_to_ENST00000540924_5end | |||
|description=CAGE_peak_5_at_C12orf35_5end | |||
|id=chr12:32112328..32112331,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.81e-12!140;CL:0000037!1.05e-09!172;CL:0000566!1.05e-09!172;CL:0002031!8.56e-09!124;CL:0002032!2.45e-08!165;CL:0000837!2.45e-08!165;CL:0000988!3.87e-08!182;CL:0002087!1.31e-07!119;CL:0000838!5.54e-07!52;CL:0000542!6.30e-07!53;CL:0000051!6.30e-07!53;CL:0000791!8.82e-07!18;CL:0000789!8.82e-07!18;CL:0002420!8.82e-07!18;CL:0002419!8.82e-07!18;CL:0000790!8.82e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.53e-12,136;CL:0000037,1.32e-08,168;CL:0000988,2.39e-07,177;CL:0002032,3.24e-07,161;CL:0000837,3.24e-07,161;CL:0002031,5.72e-07,120;CL:0000791,5.98e-07,18;CL:0000789,5.98e-07,18;CL:0002420,5.98e-07,18;CL:0002419,5.98e-07,18;CL:0000790,5.98e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-15!115;UBERON:0001017!1.60e-10!82;UBERON:0001049!5.73e-10!57;UBERON:0005068!5.73e-10!57;UBERON:0006241!5.73e-10!57;UBERON:0007135!5.73e-10!57;UBERON:0005743!1.23e-09!86;UBERON:0000073!2.27e-09!94;UBERON:0001016!2.27e-09!94;UBERON:0003080!6.58e-09!42;UBERON:0002780!1.43e-08!41;UBERON:0001890!1.43e-08!41;UBERON:0006240!1.43e-08!41;UBERON:0000955!1.52e-08!69;UBERON:0006238!1.52e-08!69;UBERON:0002616!8.34e-08!59;UBERON:0002020!8.36e-08!34;UBERON:0003528!8.36e-08!34;UBERON:0001893!1.09e-07!34;UBERON:0002791!1.39e-07!33;UBERON:0001869!1.51e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.99e-11,114;UBERON:0001049,4.25e-09,56;UBERON:0005068,4.25e-09,56;UBERON:0006241,4.25e-09,56;UBERON:0007135,4.25e-09,56;UBERON:0001017,2.88e-08,81;UBERON:0000073,3.04e-08,53;UBERON:0002616,3.04e-08,53;UBERON:0001016,6.95e-08,89;UBERON:0002780,1.32e-07,41;UBERON:0001890,1.32e-07,41;UBERON:0003080,1.32e-07,41;UBERON:0006240,1.32e-07,41;UBERON:0002791,2.48e-07,32;UBERON:0000955,3.13e-07,68;UBERON:0006238,3.13e-07,68 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0.37129905888014,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.369363174230364,0,0,1.14494394852423,0.547497700291537,0.251085279189606,0.840547463227464,0.656804715599566,0.865818594450472,0,2.68680578668049,0.309632246632152,0.919421224478927,0,0,0.46480320348181,0.426507697462265,0.587200878669695,1.66198622559563,0.601633342410425,0.651032612147555,1.34349284543955,1.6194683300949,2.31818010870768,0.726991193897824,0.755751887377619,1.4555043671269,0,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,0.709446689665756,0.344745680736619,0,0,1.31769637679823,0,0.674170453335254,0,0.962787081228281,0.639337125799041,1.31940520074686,0.797854630486527,0,0.580418477257168,0,0,1.00499466102697,0.521482918420201,0.217188844705117,0,1.84138817993782,1.26584954976354,0.422510572623884,0.850417199860174,1.25795187305026,2.02191536063691,1.05123824989054,1.44653028027372,0,0.59675003159727,0.365328307529268,3.51992488922645,4.36910889009705,1.77901850772711,1.28019066769952,2.80277190925209,0,0.661044872784862,0.954053754535364,1.1384259382189,1.76171156811282,1.52909291250092,0,0.560508562981536,0.526768169550154,1.96709770113833,0.786021525498329,2.2616164889946,2.17342444007882,2.28145586643513,1.4203434172042,0,1.6711568532776,1.76763544484902,2.43687284041983,1.89562704635511,1.5370958367081,0.520237390239513,1.80881695064044,1.38175008892924,1.44901542867526,1.92772532110679,3.21048993707656,1.04535523804977,1.13309342697566,0.766440987203842,1.03088233644789,1.77113784413652,1.27426165729639,1.95325036156926,0.950452044448374,3.76437797694432,4.35154477925022,0,1.89421801635213,2.46338399076314,2.21767417547206,0.802320587350522,2.02754165435919,0,0.670700859703636,0.639312809217652,1.0843174571537,0,0.289693037921647,0.795285947051099,0,0.756278537312543,0.443458794925128,0.43917392846563,0.523916301990851,0,0,1.29818957461873,1.74129737299267,1.72845348674525,0.953962497221368,2.85997455390064,1.11437250398869,0,0,0,0.56530794192401,0,0.550236083880135,0,1.03366703667732,0.71153252537342,2.34304428935269,0,0.760272105718513,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.662045904066094,0.860509862246441,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.490385709340376,0.454072282934794,0,0,0.624320153660641,0,0.149448680551801,0.469737994575059,0.971237666208789,0.140450806702248,0.61246251376468,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.750711119231785,0,0.877955241761676,0,0.600952235626387,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.618315175430633,0.515281080091258,0.37223371266318,0.168776332241266,0.389748020644795,0.504867548488229,1.01254888506529,0.969876340912871,0,0.302256294682921,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0.397589304964456,0.232387885739037,0.621966330092223,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.614942192715568,0,0.439001141634502,0,0.201057944823262,0.740707561268237,0,0,1.44331342025273,0.463721619900307,0.70445216541493,0.433099343283221,0,0.570762456703795,0,0.858486162094873,2.46217006087397,1.17002132569619,0.743155811443641,0,0.335964256397719,0.708875486211932,0.447792613514241,0.290633938513962,0,0.492663237895943,1.67292024625129,2.90259361757081,3.17063897517315,2.14612136824846,0.126995788584338,0,1.17217447210047,1.71072446022705,0.205654985406647,0,0.571652865261156,0.448524337381443,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0,1.42977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.399891964728228,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.896681151948218,1.57624608161542,1.07813787429759,1.28343036279748,1.01637849688985,6.50699269288109,0.773288812777695,2.01019518401218,0.637938751653163,4.49404214368309,2.99161459204025,2.90090859405225,0.12269149171914,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0,0.585707074963566,0.902838299183157,0,0,0,0,0.434418072340414,0.391602314925481,0,2.06768026122887,0.647142602455851,1.921096040462,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,4.45254199334973,0.308419387605311,0.355123450626254,0.246381468041427,1.03850885836724,0.116210378459959,0.604297247958111,0.601519410909855,0.184161977871793,0.229628896329213,0.364182336013434,0.655622074797121,0.451199612907412,0.924184045252977,0,0,0.316654886678627,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0.223874754722178,0.657779629937804,1.5686127061494,0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| |||
|short_description=p5@C12orf35 | |||
}} |
Revision as of 12:54, 11 January 2014
Short description: | p5@C12orf35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C12orf35_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000540924_5end |
EntrezGene: | C12orf35 |
HGNC: | 25559 |
UniProt: | F5H488 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.53e-12 | 136 |
hematopoietic stem cell | 1.32e-08 | 168 |
hematopoietic cell | 2.39e-07 | 177 |
hematopoietic oligopotent progenitor cell | 3.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.24e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 5.72e-07 | 120 |
mature alpha-beta T cell | 5.98e-07 | 18 |
alpha-beta T cell | 5.98e-07 | 18 |
immature T cell | 5.98e-07 | 18 |
mature T cell | 5.98e-07 | 18 |
immature alpha-beta T cell | 5.98e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.99e-11 | 114 |
neural tube | 4.25e-09 | 56 |
neural rod | 4.25e-09 | 56 |
future spinal cord | 4.25e-09 | 56 |
neural keel | 4.25e-09 | 56 |
central nervous system | 2.88e-08 | 81 |
regional part of nervous system | 3.04e-08 | 53 |
regional part of brain | 3.04e-08 | 53 |
nervous system | 6.95e-08 | 89 |
regional part of forebrain | 1.32e-07 | 41 |
forebrain | 1.32e-07 | 41 |
anterior neural tube | 1.32e-07 | 41 |
future forebrain | 1.32e-07 | 41 |
regional part of telencephalon | 2.48e-07 | 32 |
brain | 3.13e-07 | 68 |
future brain | 3.13e-07 | 68 |