FFCP PHASE1:Hg19::chr12:6716537..6716557,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1919 | |||
|TSSclassifier=strong | |||
|UniProt=Q14839,F5H2G1,B3KY63,Q05CG6 | |||
|association_with_transcript=0bp_to_ENST00000309577,ENST00000357008,ENST00000537464,ENST00000539431,NM_001273,uc001qpo.2,uc001qpp.2_5end | |||
|description=CAGE_peak_1_at_CHD4_5end | |||
|id=chr12:6716537..6716557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.79e-17!235;DOID:14566!5.84e-15!239;DOID:0050686!5.53e-14!137;DOID:2531!1.29e-11!51;DOID:0060083!1.29e-11!51;DOID:1240!2.08e-09!39;DOID:8692!6.30e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.84e-08;31!DOID:2531;9.86e-08;51!DOID:0060083;9.86e-08;51!DOID:1240;1.38e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.79e-17,235;DOID:14566,5.84e-15,239;DOID:0050686,5.53e-14,137;DOID:2531,1.29e-11,51;DOID:0060083,1.29e-11,51;DOID:1240,2.08e-09,39;DOID:8692,6.30e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=27.4334352698541,41.3214011109597,27.3451543946184,24.0175916047513,31.2872766099101,19.1914475302081,20.2639902534648,30.9542737979147,31.3422753839806,34.1570171737097,52.3350875979321,51.989046566981,74.3822878604239,52.3531673020997,63.9596935154877,52.4413614232385,40.9832279056304,45.2792256040171,36.594959909288,38.5368911780346,49.164166589865,55.7949404230996,48.0876458380175,73.2278174139931,67.9185680207883,94.1413158814759,93.9230743307379,99.0968736739222,50.7439917135086,50.2816511507349,41.6455371720244,37.696270203636,86.1448927705795,54.3538394945178,54.691843609693,71.0846162437108,81.3273216957527,80.8833296456541,107.692368291466,70.0945112412201,47.470080538864,50.5274118989608,52.8029913650082,39.6937191868212,45.7229891863459,53.8536615836952,63.6855561121576,72.7767161798632,69.9936398222934,45.7430903792219,48.9266949470582,37.600674552285,64.4674422977477,74.8762232957238,55.5248595036801,43.1074957552565,45.8482332097181,41.3491211378956,63.9715335055186,47.8184250343379,74.1631065926888,29.6866170168045,31.3157942465962,37.5077780468771,74.8739835661747,112.909659713537,128.924205542084,40.9535324368492,42.7615993104565,38.0080478233954,88.9937268871052,75.4969153774508,78.1662096978985,21.75929449013,36.3553352940224,19.498254032279,33.9232466062415,36.9435156390106,58.6648391444342,24.5110959617474,25.4613346814835,19.5450644528158,45.7590235599439,52.9754452924268,42.6964441854506,38.4057200309856,56.0554381850417,55.1762342356304,42.967916731016,42.9324189540914,88.2280102119645,99.2430850036887,99.0087660844343,70.0508041468837,91.9234043289719,42.1414535640123,38.5551149423113,62.8817220398664,39.8866908059048,39.4560129122,23.1404809309849,17.9910166179199,37.0170783975031,33.9801893499779,22.0954430606128,26.3625334554509,28.4344056953266,38.6835785571539,36.5466766643258,38.1495938680529,32.6093020987301,31.0089301736506,22.6878441637952,26.2190011527919,25.0885257131944,34.4460401800601,36.0227263985806,20.6176467289578,31.3744418104184,34.0864993326784,20.8346705234054,25.6622052001061,27.7058219103102,37.7560502905534,36.2299107001803,38.5946920831747,24.6338399076314,45.1599104823401,96.0110302862791,59.9573032074788,60.9517165784904,50.9732653374763,25.5725123687061,30.3608888003036,38.6030191189635,40.9915648659131,62.0323038699857,62.77589826904,69.3885557984258,70.2882189956328,73.7812199822259,44.8603333579666,36.7938241175468,83.797284069281,34.0774763337417,41.6170072145249,41.0840098003293,25.7569874249769,40.039643754609,37.1457501329565,53.0695627669103,58.4959524672165,52.7653562443543,70.6634927405012,53.276428398658,57.7747888074142,58.518590630307,51.1665183155271,56.2110695045002,43.8484002721718,56.7989337123897,41.0546937087997,57.8427076389162,56.6201143732638,58.3302202474867,63.1349078968444,120.347743727627,105.516957212873,52.1276567384003,42.7169546805658,61.3725842166864,279.374484964454,380.024658865359,53.6395684135317,65.600297623782,33.8103466144428,54.1553549526065,89.2061890528811,52.8455889475552,51.0216616129499,58.7119476513377,48.5935070381805,49.7937656639626,59.9462490710112,56.0674327679163,44.045011444675,56.4652405990399,28.3528932518894,53.3793731379848,51.9129357605449,41.3972845128489,73.5139961509968,59.5692435274724,59.6915928484556,38.7892925384297,56.7494545980368,56.2092249596164,46.3321114340001,66.5148039759318,25.4845181342647,30.181961956282,41.4106840327003,78.9497860392094,32.1394373961652,58.8230011980323,49.6510229194412,63.0999847407707,27.5640205078851,92.0268831083862,33.101395266878,24.3721686333496,86.1261445762235,51.9384747361732,86.5672214553314,31.0815150073755,88.101245429941,45.8928294309246,104.255148762819,35.7153606732121,54.6363672047584,82.7172350563711,49.1670239350885,32.0469519466822,42.9039094022519,47.1850788622144,68.5462982979719,90.2605425359006,87.9997661654662,82.8462812659666,103.350071850324,70.9021590960516,76.2802680468485,45.3703643756466,57.2484434991668,29.0083334840209,43.650585235006,38.259612528488,36.0835740121524,38.4373093378072,41.9359191997259,37.7205386744787,40.0898177130027,38.4378402959977,32.0898513421191,36.1047495830637,32.3187611834968,63.4813690977197,64.5112159495851,39.5111050878144,39.6923520740963,44.3642621876408,46.1928791838484,50.2171420679193,73.7243376022466,58.2965198694358,28.3086886992567,49.7168792901074,26.9764207818287,45.6401534748804,64.9045000561293,24.109814592964,48.8769349081402,44.7427160278347,47.8792572547067,58.8217558121467,43.1655678805611,39.8167540815885,50.6076044944031,76.6498266020497,54.084628211977,40.3795889983332,37.9086909525565,64.5059244333081,28.1201501960331,29.0609081784027,34.1677984354151,34.9278238541108,35.1667065601894,43.7056254248341,151.740277271951,61.1936616391921,123.5675568623,92.8132500005232,132.17582779742,45.464492313193,53.8603680037171,62.1252470213249,63.2968050284009,53.2646412203216,63.0720421472227,43.7314441924785,45.9737445815979,50.5713679846605,31.5354629030085,50.9330560085644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| |||
|short_description=p1@CHD4 | |||
}} |
Revision as of 11:42, 11 January 2014
Short description: | p1@CHD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309577, ENST00000357008, ENST00000537464, ENST00000539431, NM_001273, uc001qpo.2, uc001qpp.2_5end |
EntrezGene: | CHD4 |
HGNC: | 1919 |
UniProt: | Q14839F5H2G1B3KY63Q05CG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 4.79e-17 | 235 |
disease of cellular proliferation | 5.84e-15 | 239 |
organ system cancer | 5.53e-14 | 137 |
hematologic cancer | 1.29e-11 | 51 |
immune system cancer | 1.29e-11 | 51 |
leukemia | 2.08e-09 | 39 |
myeloid leukemia | 6.30e-08 | 31 |