FFCP PHASE1:Hg19::chr12:8803107..8803131,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr12:8803107..8803131,+ | |||
|id=chr12:8803107..8803131,+ | |||
|ontology_enrichment_celltype=CL:0002536!1.36e-12!2;CL:0002334!8.54e-12!12;CL:0000214!1.06e-08!3;CL:0002580!1.88e-08!3;CL:0000511!1.65e-07!1;CL:0002625!1.65e-07!1;CL:0000216!1.65e-07!1;CL:0002581!1.75e-07!1;CL:0000057!3.27e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0002581;2.37e-29;1!CL:0000216;2.37e-29;1!CL:0000135;9.90e-11;3!CL:0002615;9.90e-11;3!CL:0000388;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.33e-29,1;CL:0002625,1.33e-29,1;CL:0000216,1.33e-29,1;CL:0002581,1.78e-29,1;CL:0000135,9.90e-11,3;CL:0000388,9.90e-11,3;CL:0002615,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease=DOID:178!5.45e-07!1;DOID:326!5.45e-07!1;DOID:3978!5.45e-07!1;DOID:3394!5.45e-07!1;DOID:5844!5.45e-07!1;DOID:6193!6.49e-07!1;DOID:4235!6.88e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!1.06e-08!3;UBERON:0002018!1.06e-08!3;UBERON:0002217!1.06e-08!3;UBERON:0007616!1.06e-08!3;UBERON:0004923!1.84e-08!57;UBERON:0004457!4.83e-08!12;UBERON:0000042!4.83e-08!12;UBERON:0001136!1.65e-07!1;UBERON:0001343!1.65e-07!1;UBERON:0004910!1.65e-07!1;UBERON:0005154!1.65e-07!1;UBERON:0005295!1.65e-07!1;UBERON:0004813!1.65e-07!1;UBERON:0005297!1.65e-07!1;UBERON:0005294!1.65e-07!1;UBERON:0010141!1.65e-07!1;UBERON:0005891!1.65e-07!1;UBERON:0000473!1.75e-07!8;UBERON:0004871!3.47e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.42e-32;8!UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0003135;6.11e-24;11!UBERON:0004909;2.05e-15;2!UBERON:0005406;2.05e-15;2!UBERON:0000991;6.31e-13;21!UBERON:0003101;2.26e-12;22!UBERON:0000079;2.26e-12;22!UBERON:0007846;9.90e-11;3!UBERON:0000043;9.90e-11;3!UBERON:0007845;9.90e-11;3!UBERON:0005904;2.26e-08;4!UBERON:0002323;2.45e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.15e-32,8;UBERON:0001136,1.33e-29,1;UBERON:0001343,1.33e-29,1;UBERON:0004910,1.33e-29,1;UBERON:0005154,1.33e-29,1;UBERON:0005295,1.33e-29,1;UBERON:0004813,1.33e-29,1;UBERON:0005297,1.33e-29,1;UBERON:0005294,1.33e-29,1;UBERON:0010141,1.33e-29,1;UBERON:0005891,1.33e-29,1;UBERON:0003135,5.23e-24,11;UBERON:0004909,1.54e-15,2;UBERON:0005406,1.78e-15,2;UBERON:0000991,5.82e-13,21;UBERON:0009196,5.82e-13,21;UBERON:0009117,5.82e-13,21;UBERON:0005564,5.82e-13,21;UBERON:0004176,2.09e-12,22;UBERON:0003101,2.09e-12,22;UBERON:0000079,2.09e-12,22;UBERON:0007846,9.90e-11,3;UBERON:0000043,9.90e-11,3;UBERON:0007845,9.90e-11,3;UBERON:0002323,2.22e-10,46;UBERON:0004458,8.97e-10,49;UBERON:0003886,6.55e-09,54;UBERON:0005904,1.96e-08,4;UBERON:0002553,6.16e-08,61 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.482561763430822,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,2.34913964476542,4.28742608249886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:8803107..8803131,+ | |||
}} |
Revision as of 11:58, 11 January 2014
Short description: | p@chr12:8803107..8803131, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr12:8803107..8803131, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.33e-29 | 1 |
seminiferous tubule epithelial cell | 1.33e-29 | 1 |
Sertoli cell | 1.33e-29 | 1 |
perirenal preadipocyte | 1.78e-29 | 1 |
fibrocyte | 9.90e-11 | 3 |
tendon cell | 9.90e-11 | 3 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.15e-32 | 8 |
mesothelium | 1.33e-29 | 1 |
seminiferous tubule of testis | 1.33e-29 | 1 |
epithelium of male gonad | 1.33e-29 | 1 |
epithelial cord | 1.33e-29 | 1 |
sex cord | 1.33e-29 | 1 |
seminiferous tubule epithelium | 1.33e-29 | 1 |
testis sex cord | 1.33e-29 | 1 |
genital ridge | 1.33e-29 | 1 |
primitive sex cord of indifferent gonad | 1.33e-29 | 1 |
coelomic epithelium | 1.33e-29 | 1 |
male reproductive organ | 5.23e-24 | 11 |
epithelium of gonad | 1.54e-15 | 2 |
perirenal fat | 1.78e-15 | 2 |
gonad | 5.82e-13 | 21 |
indifferent external genitalia | 5.82e-13 | 21 |
indifferent gonad | 5.82e-13 | 21 |
gonad primordium | 5.82e-13 | 21 |
external genitalia | 2.09e-12 | 22 |
male organism | 2.09e-12 | 22 |
male reproductive system | 2.09e-12 | 22 |
dense regular connective tissue | 9.90e-11 | 3 |
tendon | 9.90e-11 | 3 |
regular connective tissue | 9.90e-11 | 3 |
body cavity | 2.22e-10 | 46 |
body cavity or lining | 8.97e-10 | 49 |
body cavity precursor | 6.55e-09 | 54 |
duct of male reproductive system | 1.96e-08 | 4 |
anatomical cavity | 6.16e-08 | 61 |