FFCP PHASE1:Hg19::chr13:114145441..114145461,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20329 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000474393_5end | |||
|description=CAGE_peak_3_at_TMCO3_5end | |||
|id=chr13:114145441..114145461,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.71e-27!180;CL:0000548!1.18e-24!679;CL:0000004!1.18e-24!679;CL:0000255!1.18e-24!679;CL:0000012!1.01e-23!682;CL:0000144!1.49e-21!625;CL:0002371!1.09e-20!591;CL:0000057!1.03e-18!75;CL:0000220!2.02e-18!246;CL:0000222!3.16e-18!119;CL:0002321!1.03e-17!248;CL:0000003!7.76e-12!722;CL:0000183!8.55e-12!59;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000187!4.43e-10!54;CL:0000192!6.50e-10!42;CL:0000514!6.50e-10!42;CL:0000063!5.44e-09!578;CL:0000393!4.44e-08!60;CL:0000211!4.44e-08!60;CL:0000359!7.14e-08!32;CL:0000066!7.82e-08!254;CL:0000213!2.37e-07!57;CL:0000215!2.37e-07!57;CL:0002139!8.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.06e-08;73!CL:0000192;1.57e-08;43!CL:0000359;4.03e-08;32!CL:0002320;2.22e-07;188!CL:0002139;2.62e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-21,76;CL:0000222,5.14e-20,121;CL:0002321,5.36e-15,250;CL:0000680,7.79e-12,58;CL:0000056,7.79e-12,58;CL:0000355,7.79e-12,58;CL:0000192,2.70e-11,43;CL:0000514,2.70e-11,43;CL:0000187,2.96e-11,55;CL:0000048,3.17e-09,427;CL:0000723,1.15e-08,433;CL:0000359,1.51e-08,32;CL:0000393,1.62e-08,61;CL:0000211,1.62e-08,61;CL:0000213,1.06e-07,58;CL:0000215,1.06e-07,58;CL:0000034,1.14e-07,441;CL:0002139,1.31e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.57e-08;43!CL:0000355;5.80e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.92e-17!79;UBERON:0007798!9.92e-17!79;UBERON:0002100!1.24e-15!216;UBERON:0000914!5.65e-15!83;UBERON:0002329!5.65e-15!83;UBERON:0003077!5.65e-15!83;UBERON:0003059!5.65e-15!83;UBERON:0007282!5.65e-15!83;UBERON:0009618!5.65e-15!83;UBERON:0007285!5.65e-15!83;UBERON:0005256!1.80e-14!143;UBERON:0000926!1.85e-14!448;UBERON:0004120!1.85e-14!448;UBERON:0006603!1.85e-14!448;UBERON:0000055!3.43e-14!69;UBERON:0004872!3.64e-14!84;UBERON:0003914!8.32e-14!118;UBERON:0000490!3.49e-13!138;UBERON:0001981!6.96e-13!60;UBERON:0007500!6.96e-13!60;UBERON:0004537!6.96e-13!60;UBERON:0006965!6.96e-13!60;UBERON:0000468!1.19e-12!659;UBERON:0000486!2.64e-12!82;UBERON:0004290!6.60e-12!70;UBERON:0000467!1.43e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0004535!6.10e-11!110;UBERON:0003104!8.29e-11!238;UBERON:0009142!8.29e-11!238;UBERON:0001637!2.49e-10!42;UBERON:0003509!2.49e-10!42;UBERON:0004572!2.49e-10!42;UBERON:0001134!3.84e-10!61;UBERON:0002036!3.84e-10!61;UBERON:0003082!3.84e-10!61;UBERON:0001009!4.01e-10!113;UBERON:0002385!1.26e-09!63;UBERON:0001015!1.26e-09!63;UBERON:0000383!1.26e-09!63;UBERON:0000475!4.51e-09!365;UBERON:0004573!6.29e-09!33;UBERON:0004571!6.29e-09!33;UBERON:0003102!2.58e-08!95;UBERON:0004923!8.87e-08!57;UBERON:0006914!3.86e-07!25;UBERON:0002050!6.89e-07!605;UBERON:0005423!6.89e-07!605;UBERON:0000119!7.60e-07!312;UBERON:0000923!7.71e-07!604;UBERON:0005291!7.71e-07!604;UBERON:0006598!7.71e-07!604;UBERON:0002532!7.71e-07!604;UBERON:0000481!9.64e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.03e-08;33!UBERON:0004571;1.03e-08;33!UBERON:0000055;1.62e-08;65!UBERON:0001637;1.71e-08;42!UBERON:0003509;1.71e-08;42!UBERON:0004572;1.71e-08;42!UBERON:0007500;2.55e-08;56!UBERON:0001981;2.55e-08;56!UBERON:0004537;2.55e-08;56!UBERON:0002049;8.48e-08;75!UBERON:0007798;8.48e-08;75!UBERON:0003914;1.82e-07;74!UBERON:0001434;1.86e-07;36!UBERON:0006914;1.90e-07;25!UBERON:0000487;8.32e-07;22!UBERON:0004765;9.99e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.07e-17,78;UBERON:0007798,4.07e-17,78;UBERON:0000490,6.29e-15,148;UBERON:0004872,1.85e-14,83;UBERON:0000055,3.23e-14,68;UBERON:0007503,9.82e-14,78;UBERON:0000486,1.75e-13,83;UBERON:0007524,2.54e-13,73;UBERON:0002329,2.58e-13,71;UBERON:0003059,2.58e-13,71;UBERON:0007282,2.58e-13,71;UBERON:0004290,2.58e-13,71;UBERON:0009618,2.58e-13,71;UBERON:0003914,2.91e-13,117;UBERON:0003077,7.99e-13,72;UBERON:0007285,7.99e-13,72;UBERON:0007500,9.58e-13,59;UBERON:0001981,9.58e-13,59;UBERON:0004537,9.58e-13,59;UBERON:0006965,9.58e-13,59;UBERON:0004535,1.34e-12,109;UBERON:0001009,1.55e-11,112;UBERON:0001637,2.31e-11,42;UBERON:0003509,2.31e-11,42;UBERON:0004572,2.31e-11,42;UBERON:0001134,2.71e-11,62;UBERON:0002036,2.71e-11,62;UBERON:0003082,2.71e-11,62;UBERON:0002385,2.31e-10,64;UBERON:0001015,2.31e-10,64;UBERON:0000383,2.31e-10,64;UBERON:0003104,4.02e-10,160;UBERON:0009142,4.02e-10,160;UBERON:0005256,5.08e-10,122;UBERON:0002100,7.07e-10,199;UBERON:0004573,9.63e-10,33;UBERON:0004571,9.63e-10,33;UBERON:0003102,1.73e-08,99;UBERON:0000926,2.05e-08,315;UBERON:0004120,2.05e-08,315;UBERON:0006603,2.05e-08,315;UBERON:0006914,5.74e-08,25;UBERON:0004923,1.61e-07,66;UBERON:0000487,2.45e-07,22;UBERON:0000119,3.38e-07,309;UBERON:0000483,8.50e-07,306 | |||
|phase1_expression=3.08853244759946,3.8538094300377,1.9733616573436,3.00219895059391,2.23480547213644,5.23403114460221,0,2.52687949370732,1.30592814099919,1.96587149201207,0.697801167972428,5.89791704751465,3.4289707169699,3.58922423584135,4.30816588446291,3.36162573225888,0.602694528023977,2.19093027116212,2.92759679274304,1.35433163884467,1.63200552995402,1.56727360739044,1.14494394852423,1.64249310087461,1.88313959392204,0,0.164201178899891,0,0.786728553697808,1.15148819429164,0.309632246632152,0.919421224478927,0,1.84877005083394,0,0,0.880801318004542,1.10799081706375,0.401088894940283,0.651032612147555,0.223915474239924,0.32389366601898,0.77272670290256,1.59938062657521,1.51150377475524,1.4555043671269,0.929716147622738,0.822335776043652,0.309706370895104,0,0,0.236482229888585,0,0,1.35426486594342,0.941211697713023,1.09162460023138,0.674170453335254,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.786300418025466,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.79007586580942,2.53007406669196,6.01605492763067,2.89693037921647,2.3858578411533,3.40644409211845,2.55244006342983,1.10864698731282,1.75669571386252,0.392937226493138,1.45718115317017,0.741568885568859,1.9472843619281,1.91542711029194,0.930705723632056,0,0.571994910780128,0,1.59009925893364,3.4409383804245,3.81854551768354,3.95715559346807,1.67799774483962,2.20094433552054,2.29894463190492,3.6178346283706,2.84613010149368,3.01248551488203,3.22263453687318,1.52054421143703,3.66093086322254,2.94130464276695,1.62028389576352,1.87529429396568,2.91888184414021,3.49095589498299,3.06633274931766,3.79706263827252,2.19842092716489,1.31780417436063,0,1.3082821564276,4.47274756525787,2.65924074495618,1.98613771219828,8.3182620017156,4.61068896857864,1.68203280042692,6.4049397437823,3.7000132262574,3.42332138939743,3.3677668017422,4.08654757783647,3.63257826347835,3.45705554687999,4.68642863667593,2.18512053781224,2.2818872861778,3.73621701379503,1.996386476944,3.0755859429945,1.68540968042698,6.73708765141148,3.93069815397658,7.33613046347935,0,2.47266929278557,2.73048408581408,2.15585442544872,3.87173062094352,2.12701483782339,4.98715407871529,3.07284334616587,1.83892677479412,4.6573798261045,3.97012641060074,3.40840307808838,3.84403299873421,2.96704661623387,2.70081986475962,1.44273540933814,1.8034837803194,3.53622027030021,4.72573730275545,2.24105111870757,1.26216887122057,2.57739716198438,4.20279747728911,6.03516307278244,2.72030665214629,3.05209066158878,3.09217365061275,3.00020732649918,2.29443676311203,0.121973706129595,0,0.116193942869518,0.414644220061482,1.00928340350251,0.36497735907583,6.25798129319264,1.92972281457866,1.38134921352481,3.71494342425583,5.0531563716871,0.828147600278907,0.337169380156203,0,0.441175890929576,0.653638332277218,0.237270619111097,0.134831308160164,0,0,5.16708818237254,1.40241773803446,5.7620361586396,0,0,0.982827216677626,0.590789906681404,0,1.35287282397425,1.88724591328378,0.768251997860379,1.1240175325762,0.603173834469785,1.01847289674383,7.16778271682714,2.07986957055916,4.3299402607582,0.927443239800615,3.28744343860301,1.44366447761074,3.24089858803628,2.09279567458058,0.790204397959275,0.858486162094873,0.492434012174795,0.468008530278475,1.63494278517601,3.74935335947108,1.6798212819886,1.13420077793909,1.34337784054272,1.74380363108377,1.91691339582606,0,0.088048434013226,0,0,0.25248486685276,1.0159663086747,0.763976851116555,0,0,0.514137463516618,0.300343057843917,0,3.02753927732474,2.1798003441664,1.98013371716565,3.23179289394444,0,0.845302752556,2.92531928243358,1.04007436911366,3.34369586540785,4.25547396069835,4.26275486425759,3.28849385413739,7.05408087008876,0.823240336780769,1.95441710576241,3.55391948742546,2.37585561880029,3.31583314765545,1.74306691720059,3.89894665610022,0,1.00451418286425,0,3.35474797688216,0,4.27910715122155,2.02693829334611,2.4657158706046,2.32779252211864,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,1.49801404789436,2.99161459204025,2.07207756718018,2.94459580125936,6.00204625271613,4.34024037919577,4.78332981520856,3.56857977594324,2.99634588564476,3.16281820480326,6.3198680942821,2.27407504055985,12.4167685551006,3.32112799267718,4.42486004500088,3.99664626553181,4.11182430671755,2.74514739048685,0,0.431428401637234,0.106727557803444,1.21251028578504,1.66435439510497,2.41912234663744,4.46594054073798,3.06923946576125,0.841980283299221,3.45975702990393,5.62877973973374,4.66476371316462,7.42090332224955,1.3878872442239,3.72879623157567,2.29956036838666,2.59627214591811,2.78904908303902,1.57117284469109,1.00253235151642,1.38121483403844,2.87036120411517,3.45973219212762,3.933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| |||
|short_description=p3@TMCO3 | |||
}} |
Revision as of 18:49, 11 January 2014
Short description: | p3@TMCO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMCO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000474393_5end |
EntrezGene: | TMCO3 |
HGNC: | 20329 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-21 | 76 |
mesodermal cell | 5.14e-20 | 121 |
embryonic cell | 5.36e-15 | 250 |
muscle precursor cell | 7.79e-12 | 58 |
myoblast | 7.79e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-12 | 58 |
smooth muscle cell | 2.70e-11 | 43 |
smooth muscle myoblast | 2.70e-11 | 43 |
muscle cell | 2.96e-11 | 55 |
multi fate stem cell | 3.17e-09 | 427 |
somatic stem cell | 1.15e-08 | 433 |
vascular associated smooth muscle cell | 1.51e-08 | 32 |
electrically responsive cell | 1.62e-08 | 61 |
electrically active cell | 1.62e-08 | 61 |
lining cell | 1.06e-07 | 58 |
barrier cell | 1.06e-07 | 58 |
stem cell | 1.14e-07 | 441 |
endothelial cell of vascular tree | 1.31e-07 | 24 |