FFCP PHASE1:Hg19::chr13:94958055..94958072,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:94958055..94958072,+ | |||
|id=chr13:94958055..94958072,+ | |||
|ontology_enrichment_celltype=CL:0000188!7.69e-27!9;CL:0000594!5.73e-13!3;CL:0002504!5.89e-12!3;CL:1000279!5.89e-12!3;CL:1000280!5.89e-12!3;CL:0000680!4.27e-10!57;CL:0000056!4.27e-10!57;CL:0000355!4.27e-10!57;CL:0002554!4.53e-09!2;CL:0002570!4.29e-08!8;CL:0002583!4.87e-08!2;CL:0000187!1.00e-07!54;CL:0000183!7.34e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000594;1.04e-54;3!CL:0000188;6.89e-50;9!CL:0000680;1.84e-41;7!CL:0000511;3.25e-19;1!CL:0002625;3.25e-19;1!CL:0000216;3.25e-19;1!CL:0002554;2.72e-10;2!CL:0002570;3.68e-10;8!CL:0000187;7.74e-08;55!CL:0000515;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,1.51e-54,3;CL:0000188,9.35e-50,9;CL:0000511,2.25e-19,1;CL:0002625,2.25e-19,1;CL:0000216,2.25e-19,1;CL:0000680,5.15e-11,58;CL:0000056,5.15e-11,58;CL:0000355,5.15e-11,58;CL:0002554,2.49e-10,2;CL:0002570,3.68e-10,8;CL:0000187,2.87e-08,55;CL:0000393,1.86e-07,61;CL:0000211,1.86e-07,61;CL:0000222,6.20e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;1.68e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.43e-13!70;UBERON:0000486!9.32e-11!82;UBERON:0001134!1.10e-10!61;UBERON:0002036!1.10e-10!61;UBERON:0003082!1.10e-10!61;UBERON:0000914!1.41e-10!83;UBERON:0002329!1.41e-10!83;UBERON:0003077!1.41e-10!83;UBERON:0003059!1.41e-10!83;UBERON:0007282!1.41e-10!83;UBERON:0009618!1.41e-10!83;UBERON:0007285!1.41e-10!83;UBERON:0002385!3.09e-10!63;UBERON:0001015!3.09e-10!63;UBERON:0000383!3.09e-10!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.34e-40;16!UBERON:0002036;3.34e-40;16!UBERON:0002385;1.44e-19;31!UBERON:0001015;1.44e-19;31!UBERON:0000383;1.44e-19;31!UBERON:0001136;3.25e-19;1!UBERON:0001343;3.25e-19;1!UBERON:0004910;3.25e-19;1!UBERON:0004813;3.25e-19;1!UBERON:0004909;2.72e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.25e-19,1;UBERON:0001343,2.25e-19,1;UBERON:0004910,2.25e-19,1;UBERON:0005154,2.25e-19,1;UBERON:0005295,2.25e-19,1;UBERON:0004813,2.25e-19,1;UBERON:0005297,2.25e-19,1;UBERON:0005294,2.25e-19,1;UBERON:0010141,2.25e-19,1;UBERON:0005891,2.25e-19,1;UBERON:0004909,2.27e-10,2;UBERON:0001134,2.71e-10,62;UBERON:0002036,2.71e-10,62;UBERON:0003082,2.71e-10,62;UBERON:0002385,5.74e-10,64;UBERON:0001015,5.74e-10,64;UBERON:0000383,5.74e-10,64;UBERON:0002329,5.74e-09,71;UBERON:0003059,5.74e-09,71;UBERON:0007282,5.74e-09,71;UBERON:0004290,5.74e-09,71;UBERON:0009618,5.74e-09,71;UBERON:0003077,7.70e-09,72;UBERON:0007285,7.70e-09,72;UBERON:0007524,1.02e-08,73;UBERON:0007503,3.82e-08,78;UBERON:0000486,1.22e-07,83;UBERON:0005256,7.13e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0,0,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.917119267892,0,0,0,0,0,0.285955987316295,0,0,3.90883421152482,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.579125226670317,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,1.3864375540318,0.614014698904518,1.37836572484531,4.0819693049944,2.17525040871343,1.27839941124151,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73856760253663,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0.761610424337591,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:94958055..94958072,+ | |||
}} |
Revision as of 18:17, 11 January 2014
Short description: | p@chr13:94958055..94958072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94958055..94958072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 1.51e-54 | 3 |
cell of skeletal muscle | 9.35e-50 | 9 |
androgen binding protein secreting cell | 2.25e-19 | 1 |
seminiferous tubule epithelial cell | 2.25e-19 | 1 |
Sertoli cell | 2.25e-19 | 1 |
muscle precursor cell | 5.15e-11 | 58 |
myoblast | 5.15e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.15e-11 | 58 |
fibroblast of lymphatic vessel | 2.49e-10 | 2 |
mesenchymal stem cell of adipose | 3.68e-10 | 8 |
muscle cell | 2.87e-08 | 55 |
electrically responsive cell | 1.86e-07 | 61 |
electrically active cell | 1.86e-07 | 61 |
mesodermal cell | 6.20e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.25e-19 | 1 |
seminiferous tubule of testis | 2.25e-19 | 1 |
epithelium of male gonad | 2.25e-19 | 1 |
epithelial cord | 2.25e-19 | 1 |
sex cord | 2.25e-19 | 1 |
seminiferous tubule epithelium | 2.25e-19 | 1 |
testis sex cord | 2.25e-19 | 1 |
genital ridge | 2.25e-19 | 1 |
primitive sex cord of indifferent gonad | 2.25e-19 | 1 |
coelomic epithelium | 2.25e-19 | 1 |
epithelium of gonad | 2.27e-10 | 2 |
skeletal muscle tissue | 2.71e-10 | 62 |
striated muscle tissue | 2.71e-10 | 62 |
myotome | 2.71e-10 | 62 |
muscle tissue | 5.74e-10 | 64 |
musculature | 5.74e-10 | 64 |
musculature of body | 5.74e-10 | 64 |
somite | 5.74e-09 | 71 |
presomitic mesoderm | 5.74e-09 | 71 |
presumptive segmental plate | 5.74e-09 | 71 |
dermomyotome | 5.74e-09 | 71 |
trunk paraxial mesoderm | 5.74e-09 | 71 |
paraxial mesoderm | 7.70e-09 | 72 |
presumptive paraxial mesoderm | 7.70e-09 | 72 |
dense mesenchyme tissue | 1.02e-08 | 73 |
epithelial vesicle | 3.82e-08 | 78 |
multilaminar epithelium | 1.22e-07 | 83 |
trunk mesenchyme | 7.13e-07 | 122 |