FFCP PHASE1:Hg19::chr14:39644425..39644470,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9162 | |||
|TSSclassifier=strong | |||
|UniProt=G3V5F0 | |||
|association_with_transcript=0bp_to_ENST00000556530_5end | |||
|coexpression_cluster_id=C1724 | |||
|description=CAGE_peak_1_at_PNN_5end | |||
|id=chr14:39644425..39644470,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.99e-23!172;CL:0000566!1.99e-23!172;CL:0000988!1.19e-20!182;CL:0002032!1.95e-20!165;CL:0000837!1.95e-20!165;CL:0000542!4.22e-14!53;CL:0000051!4.22e-14!53;CL:0000838!9.35e-14!52;CL:0000738!2.03e-13!140;CL:0002031!3.36e-11!124;CL:0002087!1.54e-10!119;CL:0000945!1.59e-08!24;CL:0000826!1.59e-08!24;CL:0000763!2.56e-08!112;CL:0000049!2.56e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.52e-08;24!CL:0000542;1.78e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.21e-22,168;CL:0000988,3.09e-20,177;CL:0002032,1.94e-19,161;CL:0000837,1.94e-19,161;CL:0000542,4.22e-14,53;CL:0000051,4.22e-14,53;CL:0000838,9.35e-14,52;CL:0000738,1.50e-12,136;CL:0002031,2.24e-10,120;CL:0002087,9.97e-10,115;CL:0000945,1.59e-08,24;CL:0000826,1.59e-08,24;CL:0000763,1.41e-07,108;CL:0000049,1.41e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;1.78e-08;53 | |||
|ontology_enrichment_disease=DOID:162!2.86e-30!235;DOID:14566!1.50e-28!239;DOID:0050687!6.63e-18!143;DOID:0050686!2.30e-17!137;DOID:305!2.00e-15!106;DOID:2531!5.29e-14!51;DOID:0060083!5.29e-14!51;DOID:1240!1.36e-12!39;DOID:8692!1.12e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.28e-10;31!DOID:1240;4.25e-10;39!DOID:2531;3.35e-09;51!DOID:0060083;3.35e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.86e-30,235;DOID:14566,1.50e-28,239;DOID:0050687,6.63e-18,143;DOID:0050686,2.30e-17,137;DOID:305,2.00e-15,106;DOID:2531,5.29e-14,51;DOID:0060083,5.29e-14,51;DOID:1240,1.36e-12,39;DOID:8692,1.12e-10,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=36.1539974748408,38.9662953481589,41.7225036124075,35.0256544235956,30.8403155154829,24.4254786748103,20.2639902534648,17.6881564559513,14.1040239227913,8.84642171405432,9.07141518364156,13.3249236999405,10.2869121509097,9.90130823680373,5.96515276310248,30.9269567367817,29.5320318731749,35.0548843385939,19.0293791528298,20.9305798730539,11.0160373271897,8.77673220138646,72.9901767184195,66.9315938606404,72.563645685796,120.733181081763,126.599108931816,134.910279171646,45.236891837624,108.239890263414,48.7670788445639,16.5495820406207,10.5422071572388,7.76483421350254,180.653511753263,203.728510154475,131.239396382677,115.785040383162,130.353890855592,99.607989658576,38.513461569267,52.7946675610937,49.712084553398,48.2722152748155,63.48315853972,67.4383690102129,46.7182364180426,61.264015315252,70.6130525640836,36.5369338249131,41.2418737511852,56.992217403149,51.3671064297562,92.3043097524871,74.484567626888,61.3670026908891,65.7703821639408,77.5296021335542,41.0152415777009,68.0369537401318,59.4583526993108,36.2836430205388,46.2755685682186,47.3109473091291,50.206198282745,63.5471451654077,83.458181365407,48.7422410598082,67.271296476206,85.7895936585211,48.4319602106695,85.0721339131274,75.9509729858123,68.4467127650691,64.6317071893732,59.5430553243788,67.62183595019,78.5425149561078,135.97384634573,42.7519115611873,51.3205027173652,48.5886649013926,82.7182348968217,106.497029196116,83.6138698631741,78.5183609522373,93.6926609664269,93.6846477125808,87.2579232076018,82.0486228900413,133.76504774072,130.366656040348,126.914711737576,185.039860010636,208.509185429131,121.420063081311,158.154655171522,117.510218062,83.8854115917998,79.5807718059628,97.7766799900771,89.9550830895993,101.309898772114,79.6584766728991,81.0166245555802,85.7336172038614,154.358202346059,56.7444546384741,56.575816188547,75.4769982130873,66.8767043041753,139.97489041003,113.7357939453,155.708761948213,130.669404756221,89.5143807310773,88.9071545156457,90.030390716449,191.029867474725,74.2257415375145,63.1550950240726,63.6802869780411,94.4105996617635,106.996806925094,62.4653632761729,92.1063510451226,76.3649037136573,122.375293137413,106.708638117619,116.293996317888,43.8852359365131,19.4503249314054,21.8644980752437,29.999449647919,12.5334477658972,24.62390822334,38.9690114055039,21.8985691636186,80.9218034924421,48.7804674417641,53.4913844871138,21.5460579193737,6.55731518926576,11.8651021691017,30.5074550035402,37.9602827312403,35.2338595374993,152.395508931114,149.290671713613,158.612353067724,21.0688151808707,9.46258054616737,14.579901067519,14.6980064900242,29.7844599709033,32.463928948928,18.1825620887025,57.8853540539297,56.9226020298736,70.6260492933454,17.3216606356933,15.2054421143703,27.5790125029432,54.4141358911886,24.3042584364528,76.8870660525927,60.1738718638135,76.4631952481758,19.9311628705648,14.2389848935219,22.5338145034401,86.9750755078017,100.822868678565,6.54141078213801,26.8364853915472,53.3114454107881,175.044937035075,110.145262367544,47.5255632145798,20.1843936051231,16.0123493594557,25.9000925838018,71.5785381419463,39.739648260558,42.3366329063858,18.9196784556164,29.3849721484799,11.7160715916898,25.9092863769166,13.6913237170668,21.9689560411148,44.1553714900556,49.0475021435439,49.8600363792982,48.3845385874097,49.6250641939543,43.7068054373488,27.3240657174872,27.9411630084769,8.19145225744224,4.31170885089743,51.5108508699443,67.5640007308607,80.3485934904131,28.5335453572545,23.2930724807255,21.4840424236433,30.1729607205656,114.809366840872,43.1385925413506,45.1414949469867,95.7290596509243,56.6788910811414,86.3095809152858,29.034229587728,165.907134593165,45.4056444051186,75.4776984989902,37.6484085447004,51.0801539547446,112.18303123525,43.5249064343406,26.790573585057,24.9306500580653,38.7299491238985,47.0359536437966,131.853576326093,143.397209323847,93.4199300670928,82.0995555721734,83.0135599380817,95.9890454369433,20.3384392028761,40.5241791061518,12.4321429217232,45.5080569471339,12.271951188383,63.649058421436,76.7060339855363,75.4364523535299,62.6469765119998,66.6711098922763,67.3848558275514,59.9999321312732,70.0510630497485,70.023982564243,6.64339909162183,9.81692416624121,7.4083322039652,7.3504355692771,83.6583229824084,63.8837690840457,65.5776796416359,190.712058947129,91.011444521904,35.5145367317948,34.5713399037171,8.99214026060957,42.4232263577082,38.6093816311068,11.077482380551,10.3993478527958,41.8560891873293,40.691572146252,24.5384170952867,16.1690421492403,12.9635943521451,28.9186311396589,31.608175918371,28.3300433491308,38.1636359435466,26.2084776955946,33.5906426772526,18.7467667973554,50.3946384596579,52.0314606879558,34.211355672488,36.6198762527592,10.7347150166259,724.214959707037,68.7658269643295,93.9196363399697,106.504645575135,70.0645505516409,49.210868076431,9.54971063895694,9.37739577680376,13.6857956818164,41.4394795594394,22.8260723961377,37.7290891072363,23.6596587968711,22.2339635104973,50.5300789306346,46.7963611043156,14.30625783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| |||
|short_description=p1@PNN | |||
}} |
Revision as of 19:52, 11 January 2014
Short description: | p1@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNN_5end |
Coexpression cluster: | C1724_Mast_medulloblastoma_small_non_cerebellum_hepatoblastoma_merkel |
Association with transcript: | 0bp_to_ENST00000556530_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | G3V5F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.21e-22 | 168 |
hematopoietic cell | 3.09e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.94e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-19 | 161 |
lymphocyte | 4.22e-14 | 53 |
common lymphoid progenitor | 4.22e-14 | 53 |
lymphoid lineage restricted progenitor cell | 9.35e-14 | 52 |
leukocyte | 1.50e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.24e-10 | 120 |
nongranular leukocyte | 9.97e-10 | 115 |
lymphocyte of B lineage | 1.59e-08 | 24 |
pro-B cell | 1.59e-08 | 24 |
myeloid cell | 1.41e-07 | 108 |
common myeloid progenitor | 1.41e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.86e-30 | 235 |
disease of cellular proliferation | 1.50e-28 | 239 |
cell type cancer | 6.63e-18 | 143 |
organ system cancer | 2.30e-17 | 137 |
carcinoma | 2.00e-15 | 106 |
hematologic cancer | 5.29e-14 | 51 |
immune system cancer | 5.29e-14 | 51 |
leukemia | 1.36e-12 | 39 |
myeloid leukemia | 1.12e-10 | 31 |