FFCP PHASE1:Hg19::chr14:52118818..52118871,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |||
|TSSclassifier=strong | |||
|UniProt=G3V517 | |||
|association_with_transcript=120bp_to_ENST00000554778_5end | |||
|description=CAGE_peak_4_at_FRMD6_5end | |||
|id=chr14:52118818..52118871,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.72e-26!180;CL:0000057!3.18e-16!75;CL:0000222!7.70e-13!119;CL:0000220!9.14e-11!246;CL:0002620!1.03e-10!23;CL:0002321!2.36e-10!248;CL:0000680!1.35e-08!57;CL:0000056!1.35e-08!57;CL:0000355!1.35e-08!57;CL:0000187!8.81e-08!54;CL:0000183!8.92e-08!59;CL:0000192!1.37e-07!42;CL:0000514!1.37e-07!42;CL:0000359!2.16e-07!32;CL:0002139!5.36e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.95e-11;23!CL:0000057;1.68e-07;73!CL:0000359;1.77e-07;32!CL:0002139;7.60e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.13e-18,76;CL:0000222,5.88e-14,121;CL:0002620,2.36e-11,23;CL:0000680,4.10e-09,58;CL:0000056,4.10e-09,58;CL:0000355,4.10e-09,58;CL:0002321,2.65e-08,250;CL:0000187,3.03e-08,55;CL:0000359,5.84e-08,32;CL:0000192,6.91e-08,43;CL:0000514,6.91e-08,43;CL:0002139,4.26e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.02e-15!365;UBERON:0002049!8.81e-15!79;UBERON:0007798!8.81e-15!79;UBERON:0000490!1.33e-12!138;UBERON:0000914!2.19e-12!83;UBERON:0002329!2.19e-12!83;UBERON:0003077!2.19e-12!83;UBERON:0003059!2.19e-12!83;UBERON:0007282!2.19e-12!83;UBERON:0009618!2.19e-12!83;UBERON:0007285!2.19e-12!83;UBERON:0000055!9.33e-12!69;UBERON:0005256!1.03e-11!143;UBERON:0002100!1.30e-11!216;UBERON:0003102!1.76e-11!95;UBERON:0004290!6.81e-11!70;UBERON:0000477!8.07e-11!286;UBERON:0000468!2.09e-10!659;UBERON:0001981!2.32e-10!60;UBERON:0007500!2.32e-10!60;UBERON:0004537!2.32e-10!60;UBERON:0006965!2.32e-10!60;UBERON:0000119!3.12e-10!312;UBERON:0000486!8.52e-10!82;UBERON:0002097!2.37e-09!40;UBERON:0000483!2.38e-09!309;UBERON:0002199!2.84e-09!45;UBERON:0002416!2.84e-09!45;UBERON:0004872!4.36e-09!84;UBERON:0001637!8.79e-09!42;UBERON:0003509!8.79e-09!42;UBERON:0004572!8.79e-09!42;UBERON:0000467!1.09e-08!625;UBERON:0000480!1.19e-08!626;UBERON:0001134!3.38e-08!61;UBERON:0002036!3.38e-08!61;UBERON:0003082!3.38e-08!61;UBERON:0004573!3.68e-08!33;UBERON:0004571!3.68e-08!33;UBERON:0002385!4.21e-08!63;UBERON:0001015!4.21e-08!63;UBERON:0000383!4.21e-08!63;UBERON:0003104!4.56e-08!238;UBERON:0009142!4.56e-08!238;UBERON:0000481!4.97e-08!347;UBERON:0004535!6.28e-08!110;UBERON:0003914!9.60e-08!118;UBERON:0001009!1.54e-07!113;UBERON:0004923!2.04e-07!57;UBERON:0004111!3.30e-07!241;UBERON:0000947!4.62e-07!21;UBERON:0010191!4.62e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.42e-08;33!UBERON:0004571;4.42e-08;33!UBERON:0002049;2.60e-07;75!UBERON:0007798;2.60e-07;75!UBERON:0000947;2.94e-07;21!UBERON:0010191;2.94e-07;21!UBERON:0002097;3.11e-07;41!UBERON:0001637;5.05e-07;42!UBERON:0003509;5.05e-07;42!UBERON:0004572;5.05e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.96e-15,78;UBERON:0007798,4.96e-15,78;UBERON:0000490,2.36e-14,148;UBERON:0000055,1.16e-11,68;UBERON:0002329,1.56e-11,71;UBERON:0003059,1.56e-11,71;UBERON:0007282,1.56e-11,71;UBERON:0004290,1.56e-11,71;UBERON:0009618,1.56e-11,71;UBERON:0007524,2.09e-11,73;UBERON:0003077,2.41e-11,72;UBERON:0007285,2.41e-11,72;UBERON:0005256,3.32e-11,122;UBERON:0007503,2.01e-10,78;UBERON:0007500,2.56e-10,59;UBERON:0001981,2.56e-10,59;UBERON:0004537,2.56e-10,59;UBERON:0006965,2.56e-10,59;UBERON:0003102,3.72e-10,99;UBERON:0003104,4.18e-10,160;UBERON:0009142,4.18e-10,160;UBERON:0000486,6.93e-10,83;UBERON:0001637,1.92e-09,42;UBERON:0003509,1.92e-09,42;UBERON:0004572,1.92e-09,42;UBERON:0002097,1.98e-09,41;UBERON:0004872,2.44e-09,83;UBERON:0002199,3.44e-09,46;UBERON:0002416,3.44e-09,46;UBERON:0004573,8.67e-09,33;UBERON:0004571,8.67e-09,33;UBERON:0001134,1.17e-08,62;UBERON:0002036,1.17e-08,62;UBERON:0003082,1.17e-08,62;UBERON:0002100,1.17e-08,199;UBERON:0004535,1.66e-08,109;UBERON:0002385,1.77e-08,64;UBERON:0001015,1.77e-08,64;UBERON:0000383,1.77e-08,64;UBERON:0001009,7.02e-08,112;UBERON:0003914,9.80e-08,117;UBERON:0000119,1.57e-07,309;UBERON:0000947,1.90e-07,21;UBERON:0010191,1.90e-07,21;UBERON:0004923,2.35e-07,66;UBERON:0000483,9.16e-07,306 | |||
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| |||
|short_description=p4@FRMD6 | |||
}} |
Revision as of 20:04, 11 January 2014
Short description: | p4@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FRMD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 120bp_to_ENST00000554778_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | G3V517 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.13e-18 | 76 |
mesodermal cell | 5.88e-14 | 121 |
skin fibroblast | 2.36e-11 | 23 |
muscle precursor cell | 4.10e-09 | 58 |
myoblast | 4.10e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.10e-09 | 58 |
embryonic cell | 2.65e-08 | 250 |
muscle cell | 3.03e-08 | 55 |
vascular associated smooth muscle cell | 5.84e-08 | 32 |
smooth muscle cell | 6.91e-08 | 43 |
smooth muscle myoblast | 6.91e-08 | 43 |
endothelial cell of vascular tree | 4.26e-07 | 24 |