FFCP PHASE1:Hg19::chr14:93214962..93214979,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9472 | |||
|TSSclassifier=strong | |||
|UniProt=F5H2T8,B7Z4S8,G3V4H2,G3V2T4,G3V5B2,G3V263,G3V4P5 | |||
|association_with_transcript=0bp_to_ENST00000535855,ENST00000539531,ENST00000553371,ENST00000553802,ENST00000554080,ENST00000554189,ENST00000554397,ENST00000554919,ENST00000557034,ENST00000557315_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_1_at_LGMN_5end | |||
|id=chr14:93214962..93214979,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.15e-12!659;UBERON:0000480!1.25e-10!626;UBERON:0000467!2.67e-10!625;UBERON:0000062!1.86e-09!511;UBERON:0003914!4.63e-09!118;UBERON:0009569!4.99e-08!113;UBERON:0002417!7.78e-08!61;UBERON:0000916!7.78e-08!61;UBERON:0004872!1.06e-07!84;UBERON:0000926!2.31e-07!448;UBERON:0004120!2.31e-07!448;UBERON:0006603!2.31e-07!448;UBERON:0004457!6.73e-07!12;UBERON:0000042!6.73e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.90e-09,117;UBERON:0002417,2.40e-08,60;UBERON:0000916,2.40e-08,60;UBERON:0009569,3.93e-08,112;UBERON:0004872,1.31e-07,83;UBERON:0004457,6.72e-07,12;UBERON:0000042,6.72e-07,12 | |||
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| |||
|short_description=p1@LGMN | |||
}} |
Revision as of 21:35, 11 January 2014
Short description: | p1@LGMN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGMN_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 0bp_to_ENST00000535855, ENST00000539531, ENST00000553371, ENST00000553802, ENST00000554080, ENST00000554189, ENST00000554397, ENST00000554919, ENST00000557034, ENST00000557315_5end |
EntrezGene: | LGMN |
HGNC: | 9472 |
UniProt: | F5H2T8B7Z4S8G3V4H2G3V2T4G3V5B2G3V263G3V4P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.90e-09 | 117 |
abdominal segment of trunk | 2.40e-08 | 60 |
abdomen | 2.40e-08 | 60 |
subdivision of trunk | 3.93e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 1.31e-07 | 83 |
cavity lining | 6.72e-07 | 12 |
serous membrane | 6.72e-07 | 12 |