FFCP PHASE1:Hg19::chr15:74753622..74753661,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440288 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000499217,NR_038448,NR_038449,uc002aya.2_5end | |||
|description=CAGE_peak_1_at_LOC440288_5end | |||
|id=chr15:74753622..74753661,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.03e-24!53;CL:0000051!6.03e-24!53;CL:0000838!2.29e-23!52;CL:0000037!8.07e-22!172;CL:0000566!8.07e-22!172;CL:0000988!1.18e-20!182;CL:0002032!4.25e-20!165;CL:0000837!4.25e-20!165;CL:0000945!4.58e-13!24;CL:0000826!4.58e-13!24;CL:0000738!5.67e-12!140;CL:0000084!1.88e-11!25;CL:0000827!1.88e-11!25;CL:0002031!1.39e-10!124;CL:0002087!1.79e-10!119;CL:0000791!2.50e-08!18;CL:0000789!2.50e-08!18;CL:0002420!2.50e-08!18;CL:0002419!2.50e-08!18;CL:0000790!2.50e-08!18;CL:0000236!1.64e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.37e-14;53!CL:0000945;2.69e-13;24!CL:0000084;7.53e-12;25!CL:0000791;1.43e-08;18!CL:0000789;1.43e-08;18!CL:0002419;1.43e-08;18!CL:0000236;3.50e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.73e-24,53;CL:0000051,5.73e-24,53;CL:0000838,2.18e-23,52;CL:0000037,8.60e-23,168;CL:0000988,4.32e-22,177;CL:0002032,4.83e-21,161;CL:0000837,4.83e-21,161;CL:0000945,4.47e-13,24;CL:0000826,4.47e-13,24;CL:0000738,1.08e-12,136;CL:0000084,1.84e-11,25;CL:0000827,1.84e-11,25;CL:0002031,2.89e-11,120;CL:0002087,3.61e-11,115;CL:0000791,2.46e-08,18;CL:0000789,2.46e-08,18;CL:0002420,2.46e-08,18;CL:0002419,2.46e-08,18;CL:0000790,2.46e-08,18;CL:0000236,1.62e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.37e-14;53!CL:0000790;1.43e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!5.54e-20!51;DOID:0060083!5.54e-20!51;DOID:1240!1.34e-16!39;DOID:8692!5.53e-12!31;DOID:0050686!7.96e-10!137;DOID:162!4.15e-09!235;DOID:14566!3.89e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.82e-13;39!DOID:2531;9.27e-13;51!DOID:0060083;9.27e-13;51!DOID:8692;1.33e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.32e-20,51;DOID:0060083,5.32e-20,51;DOID:1240,1.30e-16,39;DOID:8692,5.40e-12,31;DOID:0050686,8.16e-10,137;DOID:162,4.20e-09,235;DOID:14566,4.04e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@LOC440288 | |||
}} |
Revision as of 00:31, 12 January 2014
Short description: | p1@LOC440288 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC440288_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000499217, NR_038448, NR_038449, uc002aya.2_5end |
EntrezGene: | LOC440288 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.73e-24 | 53 |
common lymphoid progenitor | 5.73e-24 | 53 |
lymphoid lineage restricted progenitor cell | 2.18e-23 | 52 |
hematopoietic stem cell | 8.60e-23 | 168 |
hematopoietic cell | 4.32e-22 | 177 |
hematopoietic oligopotent progenitor cell | 4.83e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.83e-21 | 161 |
lymphocyte of B lineage | 4.47e-13 | 24 |
pro-B cell | 4.47e-13 | 24 |
leukocyte | 1.08e-12 | 136 |
T cell | 1.84e-11 | 25 |
pro-T cell | 1.84e-11 | 25 |
hematopoietic lineage restricted progenitor cell | 2.89e-11 | 120 |
nongranular leukocyte | 3.61e-11 | 115 |
mature alpha-beta T cell | 2.46e-08 | 18 |
alpha-beta T cell | 2.46e-08 | 18 |
immature T cell | 2.46e-08 | 18 |
mature T cell | 2.46e-08 | 18 |
immature alpha-beta T cell | 2.46e-08 | 18 |
B cell | 1.62e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.32e-20 | 51 |
immune system cancer | 5.32e-20 | 51 |
leukemia | 1.30e-16 | 39 |
myeloid leukemia | 5.40e-12 | 31 |
organ system cancer | 8.16e-10 | 137 |
cancer | 4.20e-09 | 235 |
disease of cellular proliferation | 4.04e-08 | 239 |