FFCP PHASE1:Hg19::chr15:89401833..89401842,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=319 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-464bp_to_ENST00000560601_5end | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_10_at_ACAN_5end | |||
|id=chr15:89401833..89401842,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.30e-49!9;CL:0000447!1.30e-49!9;CL:0000667!1.73e-38!6;CL:0000058!1.73e-38!6;CL:0000138!1.73e-38!6;CL:0000327!1.09e-31!14;CL:0000499!5.47e-21!27;CL:0000214!2.32e-13!3;CL:0002580!6.97e-13!3;CL:0000151!2.90e-12!35;CL:0002569!5.93e-07!6;CL:0002556!8.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.49e-50;9!CL:0000447;1.49e-50;9!CL:0000138;4.21e-43;6!CL:0000327;1.22e-30;15!CL:0000499;1.44e-25;28!CL:0000151;8.37e-12;36!CL:0000135;9.90e-11;3!CL:0002615;9.90e-11;3!CL:0000214;9.90e-11;3!CL:0000388;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.02e-50,9;CL:0000447,1.02e-50,9;CL:0000058,3.16e-43,6;CL:0000138,3.16e-43,6;CL:0000327,9.68e-31,15;CL:0000499,1.24e-25,28;CL:0000151,3.64e-13,36;CL:0000214,8.99e-11,3;CL:0000135,9.90e-11,3;CL:0000388,9.90e-11,3;CL:0002615,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3369!1.43e-10!1;DOID:4235!2.50e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!2.32e-13!3;UBERON:0002018!2.32e-13!3;UBERON:0002217!2.32e-13!3;UBERON:0007616!2.32e-13!3;UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0004905!2.28e-08!5;UBERON:0000982!2.28e-08!5;UBERON:0004770!2.28e-08!5;UBERON:0004457!1.63e-07!12;UBERON:0000042!1.63e-07!12;UBERON:0003422!5.93e-07!6;UBERON:0001758!8.72e-07!6;UBERON:0003672!8.72e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.58e-13;9!UBERON:0000042;1.58e-13;9!UBERON:0007846;9.90e-11;3!UBERON:0006915;9.90e-11;3!UBERON:0007616;9.90e-11;3!UBERON:0000043;9.90e-11;3!UBERON:0007845;9.90e-11;3!UBERON:0002217;9.90e-11;3!UBERON:0002018;9.90e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,8.99e-11,3;UBERON:0007616,8.99e-11,3;UBERON:0002217,8.99e-11,3;UBERON:0002018,8.99e-11,3;UBERON:0007846,9.90e-11,3;UBERON:0000043,9.90e-11,3;UBERON:0007845,9.90e-11,3;UBERON:0004457,2.24e-10,12;UBERON:0000042,2.24e-10,12 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,1.88300474649071,0.795285947051099,11.1926020169606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0.515281080091258,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@ACAN | |||
}} |
Revision as of 01:06, 12 January 2014
Short description: | p10@ACAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_ACAN_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -464bp_to_ENST00000560601_5end |
EntrezGene: | ACAN |
HGNC: | 319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.02e-50 | 9 |
carbohydrate secreting cell | 1.02e-50 | 9 |
chondroblast | 3.16e-43 | 6 |
chondrocyte | 3.16e-43 | 6 |
extracellular matrix secreting cell | 9.68e-31 | 15 |
stromal cell | 1.24e-25 | 28 |
secretory cell | 3.64e-13 | 36 |
synovial cell | 8.99e-11 | 3 |
fibrocyte | 9.90e-11 | 3 |
tendon cell | 9.90e-11 | 3 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 8.99e-11 | 3 |
layer of synovial tissue | 8.99e-11 | 3 |
synovial joint | 8.99e-11 | 3 |
synovial membrane of synovial joint | 8.99e-11 | 3 |
dense regular connective tissue | 9.90e-11 | 3 |
tendon | 9.90e-11 | 3 |
regular connective tissue | 9.90e-11 | 3 |
cavity lining | 2.24e-10 | 12 |
serous membrane | 2.24e-10 | 12 |