FFCP PHASE1:Hg19::chr17:26694979..26695007,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942 | |||
|TSSclassifier=strong | |||
|UniProt=C9JDG5 | |||
|association_with_transcript=0bp_to_ENST00000438614_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SEBOX_5end | |||
|id=chr17:26694979..26695007,- | |||
|ontology_enrichment_celltype=CL:0000181!8.62e-21!12;CL:0000417!8.62e-21!12;CL:0000668!8.62e-21!12;CL:0000414!8.62e-21!12;CL:0000412!8.62e-21!12;CL:0000182!8.62e-21!12;CL:0002150!6.93e-12!3;CL:0000861!6.93e-12!3;CL:0000077!1.64e-09!19;CL:0002588!9.57e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.88e-13;12!CL:0002231;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.88e-13,12;CL:0000223,3.24e-07,58;CL:0002231,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.85e-07;11!CL:0000223;9.79e-07;58 | |||
|ontology_enrichment_disease=DOID:114!6.43e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.68e-20!19;UBERON:0006925!4.68e-20!19;UBERON:0008836!4.68e-20!19;UBERON:0009497!6.45e-18!25;UBERON:0000015!6.45e-18!25;UBERON:0002423!6.45e-18!25;UBERON:0006235!6.45e-18!25;UBERON:0004161!6.45e-18!25;UBERON:0008835!4.85e-17!22;UBERON:0003894!4.85e-17!22;UBERON:0005057!5.94e-17!26;UBERON:0009854!3.28e-16!23;UBERON:0007499!9.49e-15!25;UBERON:0009856!4.20e-14!26;UBERON:0003929!9.60e-14!54;UBERON:0005172!3.61e-13!55;UBERON:0005173!3.61e-13!55;UBERON:0002368!4.81e-12!35;UBERON:0002417!1.55e-11!61;UBERON:0000916!1.55e-11!61;UBERON:0002365!1.68e-11!31;UBERON:0002330!1.68e-11!31;UBERON:0005911!4.30e-09!82;UBERON:0002530!6.68e-09!59;UBERON:0000949!7.31e-09!45;UBERON:0005177!5.63e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.84e-22;19!UBERON:0006925;3.84e-22;19!UBERON:0002423;7.32e-17;25!UBERON:0002365;1.37e-13;31!UBERON:0002330;1.37e-13;31!UBERON:0002368;8.62e-12;33!UBERON:0000949;1.25e-08;43!UBERON:0002530;9.25e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.84e-22,19;UBERON:0006925,3.84e-22,19;UBERON:0008836,3.84e-22,19;UBERON:0008835,3.82e-19,22;UBERON:0003894,3.82e-19,22;UBERON:0009854,2.56e-18,23;UBERON:0007499,7.32e-17,25;UBERON:0009497,7.32e-17,25;UBERON:0000015,7.32e-17,25;UBERON:0002423,7.32e-17,25;UBERON:0006235,7.32e-17,25;UBERON:0004161,7.32e-17,25;UBERON:0009856,3.23e-16,26;UBERON:0003929,9.37e-15,54;UBERON:0002365,1.29e-13,31;UBERON:0002330,1.29e-13,31;UBERON:0002368,4.56e-12,35;UBERON:0002530,5.06e-10,59;UBERON:0005911,1.40e-09,82;UBERON:0000949,2.17e-09,45;UBERON:0005172,8.01e-08,54;UBERON:0005173,8.01e-08,54;UBERON:0002417,4.90e-07,60;UBERON:0000916,4.90e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,25.5535076336183,12.9973779469909,0,2.09080345523293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0.904318131178758,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0,0,0,0,0,0,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.315132729228895,0.329663433524666,0.741438982396034,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,19.3448948455069,15.9008266694666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,1.09642024789354,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SEBOX | |||
}} |
Revision as of 14:22, 20 January 2014
Short description: | p4@SEBOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEBOX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000438614_5end |
EntrezGene: | SEBOX |
HGNC: | 32942 |
UniProt: | C9JDG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.88e-13 | 12 |
endodermal cell | 3.24e-07 | 58 |
epithelial cell of prostate | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.84e-22 | 19 |
digestive gland | 3.84e-22 | 19 |
liver bud | 3.84e-22 | 19 |
hepatic diverticulum | 3.82e-19 | 22 |
liver primordium | 3.82e-19 | 22 |
digestive tract diverticulum | 2.56e-18 | 23 |
epithelial sac | 7.32e-17 | 25 |
epithelium of foregut-midgut junction | 7.32e-17 | 25 |
anatomical boundary | 7.32e-17 | 25 |
hepatobiliary system | 7.32e-17 | 25 |
foregut-midgut junction | 7.32e-17 | 25 |
septum transversum | 7.32e-17 | 25 |
sac | 3.23e-16 | 26 |
gut epithelium | 9.37e-15 | 54 |
exocrine gland | 1.29e-13 | 31 |
exocrine system | 1.29e-13 | 31 |
endocrine gland | 4.56e-12 | 35 |
gland | 5.06e-10 | 59 |
endo-epithelium | 1.40e-09 | 82 |
endocrine system | 2.17e-09 | 45 |
abdomen element | 8.01e-08 | 54 |
abdominal segment element | 8.01e-08 | 54 |
abdominal segment of trunk | 4.90e-07 | 60 |
abdomen | 4.90e-07 | 60 |