FFCP PHASE1:Hg19::chr17:26695936..26695947,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7448 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12724 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000539746_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_VTN_5end | |||
|id=chr17:26695936..26695947,- | |||
|ontology_enrichment_celltype=CL:0000181!4.39e-37!12;CL:0000417!4.39e-37!12;CL:0000668!4.39e-37!12;CL:0000414!4.39e-37!12;CL:0000412!4.39e-37!12;CL:0000182!4.39e-37!12;CL:0000223!9.59e-13!59;CL:0002557!3.28e-08!1;CL:0002563!4.71e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.48e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |||
|ontology_enrichment_disease=DOID:7!4.59e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.48e-36!19;UBERON:0006925!2.48e-36!19;UBERON:0008836!2.48e-36!19;UBERON:0008835!3.68e-31!22;UBERON:0003894!3.68e-31!22;UBERON:0009854!9.80e-30!23;UBERON:0007499!3.16e-27!25;UBERON:0009497!3.16e-27!25;UBERON:0000015!3.16e-27!25;UBERON:0002423!3.16e-27!25;UBERON:0006235!3.16e-27!25;UBERON:0004161!3.16e-27!25;UBERON:0005057!4.06e-26!26;UBERON:0009856!4.06e-26!26;UBERON:0003929!2.24e-23!54;UBERON:0002365!1.22e-21!31;UBERON:0002330!1.22e-21!31;UBERON:0002368!5.59e-19!35;UBERON:0005911!1.71e-14!82;UBERON:0000949!2.16e-14!45;UBERON:0005172!5.50e-14!55;UBERON:0005173!5.50e-14!55;UBERON:0002530!6.93e-13!59;UBERON:0002417!2.02e-12!61;UBERON:0000916!2.02e-12!61;UBERON:0003914!8.84e-11!118;UBERON:0004921!1.62e-09!129;UBERON:0004185!1.62e-09!129;UBERON:0000490!8.13e-09!138;UBERON:0002079!1.10e-08!1;UBERON:0001282!1.48e-08!1;UBERON:0009842!1.48e-08!1;UBERON:0003704!1.48e-08!1;UBERON:0001171!1.48e-08!1;UBERON:0001172!1.48e-08!1;UBERON:0001041!2.37e-08!98;UBERON:0000077!3.90e-08!130;UBERON:0001242!4.71e-08!4;UBERON:0001262!4.71e-08!4;UBERON:0004786!4.71e-08!4;UBERON:0004808!4.71e-08!4;UBERON:0001277!4.71e-08!4;UBERON:0000485!1.39e-07!9;UBERON:0001007!1.84e-07!155;UBERON:0001555!1.84e-07!155;UBERON:0007026!1.84e-07!155;UBERON:0002405!9.11e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.28e-23;31!UBERON:0002330;4.28e-23;31!UBERON:0002368;5.99e-20;33!UBERON:0000949;1.80e-14;43!UBERON:0005172;1.95e-10;52!UBERON:0005173;1.95e-10;52!UBERON:0002417;4.60e-08;58!UBERON:0000916;4.60e-08;58!UBERON:0002530;1.29e-07;57!UBERON:0001007;1.71e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,13.7595810334868,5.31710916013264,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,25.6466408936644,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@VTN | |||
}} |
Revision as of 14:22, 20 January 2014
Short description: | p5@VTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VTN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_ENST00000539746_5end |
EntrezGene: | VTN |
HGNC: | 12724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |