FFCP PHASE1:Hg19::chr17:37309281..37309308,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |||
|TSSclassifier=weak | |||
|UniProt=B3KSI0 | |||
|association_with_transcript=176bp_to_ENST00000461225,ENST00000539608,uc002hrj.1,uc002hrk.1_5end | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_4_at_PLXDC1_5end | |||
|id=chr17:37309281..37309308,- | |||
|ontology_enrichment_celltype=CL:0000791!1.36e-19!18;CL:0000789!1.36e-19!18;CL:0002420!1.36e-19!18;CL:0002419!1.36e-19!18;CL:0000790!1.36e-19!18;CL:0000084!6.96e-17!25;CL:0000827!6.96e-17!25;CL:0000625!1.07e-14!11;CL:0000624!4.59e-08!6;CL:0000838!6.56e-08!52;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.78e-48;18!CL:0000789;8.78e-48;18!CL:0002419;8.78e-48;18!CL:0000625;5.11e-41;11!CL:0000084;1.61e-38;25!CL:0000624;1.81e-12;6!CL:0000542;7.54e-12;53!CL:0000623;3.88e-07;3!CL:0000784;6.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.98e-48,18;CL:0000789,1.98e-48,18;CL:0002420,1.98e-48,18;CL:0002419,1.98e-48,18;CL:0000790,1.98e-48,18;CL:0000625,1.97e-41,11;CL:0000084,4.85e-39,25;CL:0000827,4.85e-39,25;CL:0000838,3.88e-22,52;CL:0000542,1.21e-21,53;CL:0000051,1.21e-21,53;CL:0000624,1.02e-12,6;CL:0002087,4.11e-10,115;CL:0000738,6.17e-09,136;CL:0002031,2.22e-08,120;CL:0000623,4.53e-07,3;CL:0000825,4.53e-07,3;CL:0000784,9.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.78e-48;18!CL:0000051;7.54e-12;53!UBERON:0003056;6.70e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.51e-33!115;UBERON:0001049!7.23e-13!57;UBERON:0005068!7.23e-13!57;UBERON:0006241!7.23e-13!57;UBERON:0007135!7.23e-13!57;UBERON:0002780!3.91e-12!41;UBERON:0001890!3.91e-12!41;UBERON:0006240!3.91e-12!41;UBERON:0002616!4.30e-12!59;UBERON:0003080!1.17e-11!42;UBERON:0000955!4.80e-11!69;UBERON:0006238!4.80e-11!69;UBERON:0001017!1.13e-09!82;UBERON:0005743!1.61e-09!86;UBERON:0003075!4.33e-09!86;UBERON:0007284!4.33e-09!86;UBERON:0000073!7.37e-09!94;UBERON:0001016!7.37e-09!94;UBERON:0002020!1.24e-08!34;UBERON:0003528!1.24e-08!34;UBERON:0001893!2.16e-08!34;UBERON:0002346!3.18e-08!90;UBERON:0000178!3.29e-08!15;UBERON:0000179!3.29e-08!15;UBERON:0000463!3.29e-08!15;UBERON:0002791!7.41e-08!33;UBERON:0001869!1.53e-07!32;UBERON:0003056!3.33e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.88e-11;2!UBERON:0005058;4.88e-11;2!UBERON:0009113;4.88e-11;2!UBERON:0000178;2.18e-10;15!UBERON:0000179;2.18e-10;15!UBERON:0000463;2.18e-10;15!UBERON:0001905;2.65e-10;2!UBERON:0002757;2.65e-10;2!UBERON:0010134;2.65e-10;2!UBERON:0005408;2.65e-10;2!UBERON:0001899;2.65e-10;2!UBERON:0002390;4.14e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.32e-11,4;UBERON:0005058,2.32e-11,4;UBERON:0009113,2.32e-11,4;UBERON:0003295,2.32e-11,4;UBERON:0005562,2.32e-11,4;UBERON:0000178,1.97e-10,15;UBERON:0000179,1.97e-10,15;UBERON:0000463,1.97e-10,15;UBERON:0001905,5.09e-10,2;UBERON:0002757,5.09e-10,2;UBERON:0010134,5.09e-10,2;UBERON:0005408,5.09e-10,2;UBERON:0001899,5.09e-10,2;UBERON:0003351,1.03e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,3.73748563216283,1.96505381374582,1.85041349099558,0,0.977766799900771,0.473447805734733,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,3.70716407905151,4.54819407752512,2.09071047609954,0,1.14966148080576,1.03088233644789,1.77113784413652,1.91139248594458,1.30216690771284,2.85135613334512,1.6563263098555,0.895906278080929,1.24930726552346,4.2619905367923,4.10563998460523,2.62088766192152,2.13952156626806,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0.26591592103773,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.862510299438069,2.43851768931522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,1.60091336705167,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,1.52234282769651,3.0585488285695,1.13929437434833,0.238231775457789,1.23408681925858,0,1.62009431171434,0.79312517629427,0.213648142254946,0.962479855263359,0,0,0,1.42283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.606802608747567,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.361789315876224,0,1.10579259931225,0.295547618953547,0.438770794307945,0,0.278847488557207,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.530745387020035,0,0,0,0.104421949505455,0.134802265961354,0,0.468528891450678,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0.581934098930517,0.0882561266915003,1.80784592624426,0,0,0.379864775735272,0,0,0.213452994739353,0,0.432271251462318,0.687219576995494,0,0.14405479798815,0.124252535565433,0,0.271808412147228,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0.275078873194468,0,0,0,0.607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.66116300871345,0.171086837884329,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0.887432412294818,0.496771223531068,0,0,0,0.856396000634902,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.779441235357554,0.265729680626726,0.817826971279221,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.385375350578757,0,1.11743701340006,0.205116364240755,0,0.484100767249525,0.161475645631851,1.42769420259154,0.294443155503077,0,0.366857197043358,0,0,0,0.198916222116275,0.376051641746286,0.20170506870352,0,0,0,0,0.270150338473579,0,0.826747186004736,0.507326481551255,0,0,0.496211178389294,0,0,2.14280734351315,1.00885116665647,0,0.455324382702595,0,0.230467975111559,0,0.339848664884159,0.460409414939944,0,0,0.313972371402056,0.314231179832004,0,0,0.431855182437243,0,1.00067161847319,0.316027223465453,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0.397901550322736,1.18920090777569,0,0.219881033490858,0,0.385870790539723,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0,0,0.320965466756673,0,0,0.143339583151451,0.157771562193185,0.475940431336403,0,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,0.26721740526556,0.18378979906969,0,0,0,0.829169439458779,0.20686599172379,0,0.23806443146374,3.61697895081634,10.3044025731124,0,0.381882949668989,0,0.217716747896961,0,0.5388164241167,0.358611026963382,0.332660356546013,0.0814032686109745,0,0,0,2.34640942403454,0.366724332548599,0,0,1.40891655513718,0 | |||
|short_description=p4@PLXDC1 | |||
}} |
Revision as of 14:58, 20 January 2014
Short description: | p4@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLXDC1_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | 176bp_to_ENST00000461225, ENST00000539608, uc002hrj.1, uc002hrk.1_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | B3KSI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.98e-48 | 18 |
alpha-beta T cell | 1.98e-48 | 18 |
immature T cell | 1.98e-48 | 18 |
mature T cell | 1.98e-48 | 18 |
immature alpha-beta T cell | 1.98e-48 | 18 |
CD8-positive, alpha-beta T cell | 1.97e-41 | 11 |
T cell | 4.85e-39 | 25 |
pro-T cell | 4.85e-39 | 25 |
lymphoid lineage restricted progenitor cell | 3.88e-22 | 52 |
lymphocyte | 1.21e-21 | 53 |
common lymphoid progenitor | 1.21e-21 | 53 |
CD4-positive, alpha-beta T cell | 1.02e-12 | 6 |
nongranular leukocyte | 4.11e-10 | 115 |
leukocyte | 6.17e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 2.22e-08 | 120 |
natural killer cell | 4.53e-07 | 3 |
pro-NK cell | 4.53e-07 | 3 |
plasmacytoid dendritic cell | 9.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.32e-11 | 4 |
hemolymphoid system gland | 2.32e-11 | 4 |
thymic region | 2.32e-11 | 4 |
pharyngeal gland | 2.32e-11 | 4 |
thymus primordium | 2.32e-11 | 4 |
blood | 1.97e-10 | 15 |
haemolymphatic fluid | 1.97e-10 | 15 |
organism substance | 1.97e-10 | 15 |
pineal body | 5.09e-10 | 2 |
regional part of epithalamus | 5.09e-10 | 2 |
secretory circumventricular organ | 5.09e-10 | 2 |
circumventricular organ | 5.09e-10 | 2 |
epithalamus | 5.09e-10 | 2 |
pharyngeal epithelium | 1.03e-07 | 6 |