FFCP PHASE1:Hg19::chr17:37356826..37356841,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6143 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10312 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWR8 | |||
|association_with_transcript=231bp_to_uc002hrr.1_5end | |||
|description=CAGE_peak_4_at_RPL19_5end | |||
|id=chr17:37356826..37356841,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.92e-29!679;CL:0000004!6.92e-29!679;CL:0000255!6.92e-29!679;CL:0000012!2.04e-28!682;CL:0000066!1.32e-21!254;CL:0002321!3.42e-20!248;CL:0000220!5.75e-20!246;CL:0000003!3.71e-16!722;CL:0000222!9.83e-16!119;CL:0000144!2.03e-15!625;CL:0000063!2.09e-14!578;CL:0000076!6.21e-12!62;CL:0002371!5.80e-11!591;CL:0000213!1.32e-08!57;CL:0000215!1.32e-08!57;CL:0000192!1.77e-08!42;CL:0000514!1.77e-08!42;CL:0000680!3.11e-08!57;CL:0000056!3.11e-08!57;CL:0000355!3.11e-08!57;CL:0000187!6.62e-08!54;CL:0000359!8.72e-08!32;CL:0000183!1.72e-07!59;CL:0000393!1.91e-07!60;CL:0000211!1.91e-07!60;CL:0000055!3.06e-07!180;CL:0000071!3.36e-07!18;CL:0002546!3.36e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.32e-08;32!CL:0000071;3.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.71e-19,250;CL:0000066,4.48e-18,253;CL:0000222,1.81e-16,121;CL:0000076,1.48e-12,63;CL:0000213,3.76e-09,58;CL:0000215,3.76e-09,58;CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43;CL:0000359,1.36e-08,32;CL:0000680,3.46e-08,58;CL:0000056,3.46e-08,58;CL:0000355,3.46e-08,58;CL:0000187,8.06e-08,55;CL:0000393,1.65e-07,61;CL:0000211,1.65e-07,61;CL:0000071,2.14e-07,18;CL:0002546,2.14e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.86e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!6.92e-19!239;DOID:162!1.13e-17!235;DOID:0050686!3.93e-10!137;DOID:2531!8.40e-08!51;DOID:0060083!8.40e-08!51;DOID:305!1.90e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.01e-15,239;DOID:162,1.56e-14,235;DOID:0050686,9.74e-09,137;DOID:2531,3.47e-08,51;DOID:0060083,3.47e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000490!9.99e-11!138;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0002100!1.83e-10!216;UBERON:0000055!5.11e-10!69;UBERON:0001981!5.80e-10!60;UBERON:0007500!5.80e-10!60;UBERON:0004537!5.80e-10!60;UBERON:0006965!5.80e-10!60;UBERON:0001637!1.20e-09!42;UBERON:0003509!1.20e-09!42;UBERON:0004572!1.20e-09!42;UBERON:0000486!4.57e-09!82;UBERON:0002049!5.48e-09!79;UBERON:0007798!5.48e-09!79;UBERON:0004290!8.49e-09!70;UBERON:0000914!1.21e-08!83;UBERON:0002329!1.21e-08!83;UBERON:0003077!1.21e-08!83;UBERON:0003059!1.21e-08!83;UBERON:0007282!1.21e-08!83;UBERON:0009618!1.21e-08!83;UBERON:0007285!1.21e-08!83;UBERON:0004872!1.82e-08!84;UBERON:0003914!2.65e-08!118;UBERON:0001737!1.51e-07!9;UBERON:0005256!1.54e-07!143;UBERON:0001134!2.65e-07!61;UBERON:0002036!2.65e-07!61;UBERON:0003082!2.65e-07!61;UBERON:0001986!3.36e-07!18;UBERON:0004638!3.36e-07!18;UBERON:0004852!3.36e-07!18;UBERON:0008947!4.55e-07!38;UBERON:0003258!4.55e-07!38;UBERON:0004573!4.95e-07!33;UBERON:0004571!4.95e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.88e-08;42!UBERON:0003509;1.88e-08;42!UBERON:0004572;1.88e-08;42!UBERON:0001737;2.36e-08;9!UBERON:0001557;2.36e-08;9!UBERON:0004573;2.96e-07;33!UBERON:0004571;2.96e-07;33!UBERON:0004638;3.86e-07;18!UBERON:0001986;3.86e-07;18!UBERON:0004852;3.86e-07;18!UBERON:0000072;3.92e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.25e-11,148;UBERON:0001637,3.49e-11,42;UBERON:0003509,3.49e-11,42;UBERON:0004572,3.49e-11,42;UBERON:0007500,2.10e-10,59;UBERON:0001981,2.10e-10,59;UBERON:0004537,2.10e-10,59;UBERON:0006965,2.10e-10,59;UBERON:0002100,2.12e-10,199;UBERON:0000055,2.98e-10,68;UBERON:0002049,3.33e-09,78;UBERON:0007798,3.33e-09,78;UBERON:0003914,4.03e-09,117;UBERON:0007503,5.59e-09,78;UBERON:0004872,6.79e-09,83;UBERON:0002329,2.11e-08,71;UBERON:0003059,2.11e-08,71;UBERON:0007282,2.11e-08,71;UBERON:0004290,2.11e-08,71;UBERON:0009618,2.11e-08,71;UBERON:0000486,2.59e-08,83;UBERON:0001737,2.88e-08,9;UBERON:0007524,4.82e-08,73;UBERON:0003077,4.91e-08,72;UBERON:0007285,4.91e-08,72;UBERON:0004573,5.57e-08,33;UBERON:0004571,5.57e-08,33;UBERON:0005256,1.82e-07,122;UBERON:0004638,2.14e-07,18;UBERON:0001986,2.14e-07,18;UBERON:0004852,2.14e-07,18;UBERON:0001134,5.26e-07,62;UBERON:0002036,5.26e-07,62;UBERON:0003082,5.26e-07,62;UBERON:0008947,7.98e-07,38;UBERON:0003258,7.98e-07,38;UBERON:0000487,9.84e-07,22 | |||
|phase1_expression=0.54503513781167,1.92690471501885,2.39622486963151,3.00219895059391,1.78784437770915,6.10636966870258,5.06599756336621,4.42203911398782,0.261185628199839,3.19454117451962,8.37361401566913,0.873765488520689,0.791300934685361,0.247532705920093,0.994192127183747,8.0679017574213,6.62963980826375,2.92124036154949,3.90346239032406,0.738726348460727,0.408001382488506,0,0,0.821246550437305,0.502170558379211,4.81404456212093,6.65014774544561,8.26463203793632,0.393364276848904,1.15148819429164,0.154816123316076,11.9524759182261,9.638589400904,4.43704812200145,3.79589282843478,0.995184627411951,1.46800219667424,0,0.401088894940283,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0.485168122375632,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,0,0,0,0.188242339542605,0,0.898893937780338,0.306083892370903,0.962787081228281,0,0.659702600373432,0.398927315243264,0.426224750532694,0,0,0,0,0.521482918420201,1.3031330682307,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,3.51992488922645,0,0,0.853460445133014,0,0,0.661044872784862,0,0,1.17447437874188,0,0,0.560508562981536,1.05353633910031,0.590129310341499,0.786021525498329,0.411202997999018,0.334372990781356,0.32592226663359,0,0,0.445641827540694,0,0.221533894583621,0,0.128091319725675,1.30059347559878,0.657751618414705,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.679856056185397,0.766440987203842,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,1.60464117470104,1.30341963494519,0,1.34140171940727,0.767175371061182,1.0843174571537,0.50133791063589,1.44846518960824,0.795285947051099,0.973269740605272,0.189069634328136,1.10864698731282,0.702678285545008,0.196468613246569,2.91436230634034,1.85392221392215,0,0.348259474598534,0.797747763113191,0.715471872916026,0.571994910780128,0.371457501329565,4.37277296206751,8.60234595106124,2.77712401286075,5.08777147731609,4.61449379830897,3.57653454522088,5.8518590630307,1.29208379584664,0.71153252537342,0.33472061276467,1.61131726843659,3.04108842287405,0.976248230192678,7.35326160691737,3.24056779152704,1.87529429396568,2.91888184414021,4.61707069981621,6.13266549863533,7.59412527654503,2.38162267109529,0,0,2.61656431285521,0.993943903390637,2.40597972162702,1.58891016975863,0,1.41867352879343,3.36406560085384,4.2699598291882,3.45334567784024,0.311211035399766,1.48181739276657,2.45192854670188,0.302714855289863,0,0.468642863667593,4.05808099879417,5.13424639390004,4.48346041655403,0.822041490506354,1.94247533241758,1.68540968042698,1.42907919878425,1.71968044236475,0.723280468230358,0,0.247266929278557,1.82032272387605,1.43723628363248,1.5150250255866,1.00094815897571,1.10825646193673,0.877955241761676,1.22595118319608,1.05166641234618,3.06266894532057,1.25572744982203,0.427114777637135,0.635795703478686,1.20036438433761,0.92747276314595,0.257640540045629,0.37223371266318,0,1.36411807225678,1.26216887122057,0.736399189138395,0,1.06502877754984,1.20902517873168,1.69560592310488,3.86521706326594,4.63668405004419,4.58887352622406,2.07355300420312,1.45782745153634,2.09149097165133,2.07322110030741,1.7662459561294,1.09493207722749,1.56449532329816,1.92972281457866,4.14404764057442,1.85747171212792,1.44375896333917,10.6476120035859,11.4637589253109,10.1224632551062,11.2499852187042,12.6370077573596,11.6262603364437,15.1011065139384,14.1279454890249,15.0051391209092,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,1.7658523976586,0.860919069801795,2.40194934417936,3.07300799144152,5.62008766288098,2.6137532827024,1.01847289674383,0.651616610620649,0,2.88662684050547,0.231860809950154,1.40890433082986,1.73239737313289,2.77791307545966,2.66355813128438,2.37061319387782,0.858486162094873,0.738651018262192,0.702012795417713,0.891786973732369,6.56136837907439,2.51973192298289,4.96212840348353,0.626909658919938,1.74380363108377,4.98397482914775,0.492663237895943,0,0.207328115540772,0.144119953416961,0.12624243342638,1.71444314588856,2.29193055334967,2.34434894420094,1.71072446022705,2.36503233217644,4.50514586765876,1.71495859578347,0.897048674762886,0.87192013766656,1.1734125731352,4.52451005152222,3.57656445851882,4.22651376278,1.59562869950922,5.2003718455683,1.02882949704857,1.41849132023278,1.3321108950805,1.28680194292333,1.08524321078289,0,4.23457039581856,1.42156779497018,3.95975936466715,2.71295439353627,11.3299349618038,1.69954085009497,0,1.00451418286425,0,3.35474797688216,0,2.85273810081437,3.04040744001916,1.64381058040307,1.61154866915906,3.13838403181876,0.591092280605782,0.646882724578552,1.15508732651774,0.254094624222463,0,0,0.837581326671744,0,0,0,0,0.12269149171914,0.500170521059677,1.08506009479894,1.03985430765404,2.14114786556594,2.20783381047509,1.28855556491985,2.70851489754947,0,2.0694614258501,1.32845119707087,2.21243002250044,1.56390506042549,0.587403472388222,0.343143423810856,0.413536052245775,0,0.426910231213777,2.72814814301633,1.66435439510497,0.907170879989041,2.97729369382532,1.2276957863045,3.08726103876381,2.94720043288112,1.53512174720011,5.95159508231348,2.96836132889982,2.7757744884478,3.01854933032316,3.20295908453856,1.03850885836724,3.25389059687886,2.53804844142407,7.01772646061497,0.368323955743585,1.49258782613989,2.91345868810747,0.655622074797121,0.902399225814824,0.847168708148562,2.35304930753057,2.92278449306521,0.633309773357254,0,3.2317804002538,2.80690690932781,1.54227252690289,1.62567862526312,1.00337954770971,2.03901018436031,1.66215201785745,1.79099803777743,0.219259876645935,0,0.512900250232778,1.96808787419823,0.976135183992909,0.103041011647722,0.732555718546747,0.82509499920588,0.574265537996172,1.30012049207304,1.6068392984416,1.16004861950546,2.61882649094895,1.68854042198743,2.61889487720608,0.859361958946189,1.30515024522806,2.04543905798642,1.06838442776085,2.64455864577565,1.72971060628596,0.638063562472921,0.910420027699949,7.90237433805386,0.31481234683064,0.6970372701606,1.23213432070436,6.38767236380426,1.73986598415015,3.7064843820784,9.01686786474545,1.48863347743867,1.58189712359363,4.00323407240032,1.79128453917934,0.42793898803392,2.54562598340749,0,2.33834194858309,2.47083326762449,3.18093486333353,7.48075181821269,9.5106192703805,5.05510147486777,1.95053495635836,5.36169677188826,4.22600587027022,1.77449884830381,1.27264888758341,0,0.551365343546124,6.6343897524122,8.76901770507525,3.47265320560013,0.655894752046633,9.53678771724709,6.50629346009475,5.91560765317707,2.00775893085672,1.96498082026242,7.49009208110625,1.41904425628239,1.05553817648832,0.658589785919804,3.79473173765715,1.04980416073495,2.21310859268678,10.0545341330368,7.62236894029258,0.0941438007767792,0.86101074534246,3.36942951335251,1.33029046061003,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,3.31154620495167,0,1.96032172784825,9.66176510653737,4.03953796334046,0.284567373393656,1.75368900001705,1.39705560002972,0.383010740264733,2.96343015813436,1.29848776109822,0.280797178113459,3.42352018549788,5.79715614360186,2.50634477090067,0.677167111206413,3.21176150207399,2.21979677910152,1.70338495076131,1.03051603426729,2.15068535015921,2.68411329470899,2.16903884225481,3.12620952643264,2.78406173895242,0,1.35227839237992,1.99843180798692,5.63948020351398,0.18714054040822,0.146508179271894,1.69904730449319,1.78309414843965,1.13654458722565,0.47748896947538,0,0.307160702099232,0.994147647766298,0,0.667852230137435,13.1843099381408,0.63337622438398,0,0.828851746593443,1.76352923497993,1.02268682502155,1.72318727645497,3.11039587661807,4.04407580162971,3.22238114416096,1.53471711068062,0,0,0,0,0.556608588971108,0,0,0.437299999980979,0,1.593108275997,0.508507300585533,4.72775363535873,0.689486746482929,2.04123229368278,0.868124974666461,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,1.30726156222788,0.557694977114413,0,0.341826167541004,1.84451123510448,0.807818799687949,1.08647371922008,0,0.915975934018623,0,17.3728606932752,1.56980256395025,1.82832850090172,3.38393490925771,4.50943828930801,6.20939871810618,2.84630599086278,1.74830236878417,0.843992258112108,9.95720129770801,4.24059214301822,0.216388639742091,0,0.176915129006678,0,2.6686901581256,2.84197059576957,4.49014382873458,0.067401132980677,0.802577647298789,0.468528891450678,2.91927662745066,2.54364004611717,1.94224303627274,1.97292201424695,0,0,0.189559738885464,6.31358361540869,1.45163467956146,6.64653872707185,4.30289542638149,7.53439004177341,1.19472429772959,2.56148591426813,0.554698692052555,3.47119476670262,1.7638631534588,2.52471699083167,0.17472666824203,0.51595809741485,4.16052224543066,1.90032224424082,2.54557916864949,0.387956065953678,0.617792886840502,0,3.56309004081552,13.3138789841003,0.50648636764703,0.586654148204409,0.480952921509202,0.640358984218058,1.59847687665704,1.87317542300338,3.09248809647972,1.37275998289572,4.75380833360894,0.745515213392595,1.88555227693436,1.08723364858891,0.523014231561666,1.32597682927218,0.866851769704557,1.80126086612937,0.136905378891993,0,1.28929632425987,2.10309883423452,0.279282401272254,0,0.717873024576814,0.599037001496973,0,0,0.0671834724867263,2.52209918479682,2.32991899054908,9.13884914763794,9.14816028030948,8.021021718648,3.54338933453096,7.02788656146011,0,0,2.89355667237035,3.71356478812531,3.32352270423348,0.449947783103001,0,0.668245123238271,2.0126081255956,0.315222829196793,0.104909176269996,1.79520572082991,4.48218348332112,2.68681276247223,0,0,2.79695391420225,3.25799761052228,10.3706578944152,3.5924609612035,1.19730191562487,2.9553307469762,1.5334921960688,0.679872549120754,1.75862680413699,1.32506888912221,0.904980694530854,0.39669780522807,3.25064991980226,1.40963004463334,0.320362237703084,0,0.414239055347196,2.48083010905975,2.37133958277533,3.0448149595224,0,0,0.5013797880454,0.306345576763462,0.655745261419609,0.314108192500469,0.886068179966986,0.366078794705889,0.3755727921195,0,0.221858103073705,0.434674820589684,2.49027542885215,1.62474530350739,2.72968411574966,4.28198000317451,5.64637967275612,0.468334905806882,0.144921028610825,2.38807684618998,2.33713309847224,3.88364103051829,1.89403005275089,1.50940741051545,4.44905610798268,3.66144109435078,2.41969478021182,1.70980920641059,3.69637874974085,3.18593534327405,5.39763734596325,2.01841843939137,3.7323558705677,2.65841714557995,3.65221543268214,0.450772826991655,5.33127297036314,5.69619026486526,2.00033525122815,1.28892668450986,0,3.18476710958893,1.20008329398946,1.03018711554838,1.6837474438296,0,0.385239660814607,2.35885750512418,8.61281163485198,1.13352962756136,2.77826969188601,3.91578727210348,4.47722102703719,2.47041157728778,2.63140859494449,2.65033718918822,16.3976932530278,2.70307905044916,3.8436227788192,12.7809226440543,6.07719912354764,0.276516872303462,0.194860308839388,0,0,0.655219697692825,4.42391235756695,3.59230609709666,1.79988656269437,1.06691729694141,1.03328987796489,3.40509572140102,1.10463570151104,0.419638523158333,0.622077260032973,0.383683113910955,0.970423302570136,0.629063767423586,0.764467467344097,0.848662649770126,0.637724760305049,0.371807292777007,0.558644917973244,3.81605220784102,0.47317047000752,1.60114149657094,1.41070377476274,1.531227386766,0.128458450192919,1.41696576325585,0,0.82046545696302,0,1.38314504928436,0.645902582527404,0,3.33702242903487,1.06172751012966,3.11828617486854,2.19498765685643,1.1441462864015,2.0710797781803,1.19349733269765,0,2.82387096184928,0.781514011233092,1.83334686136996,1.47394725759087,2.51355346568977,0.87798860003913,0.781078098613847,0.206686796501184,0.951237152908602,0,0,0,0.527613733078862,3.44958554626907,0,0,0,0,0.0887023701626388,3.80272158934072,0.342976018874837,0.883606528698812,1.05236437700559,2.2456829767954,1.00108261702862,0,0.471346769748006,1.68163297988273,0,0.647782773655864,0,0,0.316027223465453,0.929931402945002,0.173858272302579,0,1.86494547746733,0.85359238546975,0.691259661814092,0,1.53831600949735,1.70426809518315,3.81048345171836,0.68732060563215,1.24082554265728,0,0.447421727191169,1.27595303699816,4.02329152441489,1.29485767437579,0.821302454849976,0,0,0.467878926924211,1.39265542612958,0.83244063544298,2.71070596893504,0.329821550236287,0.452888530700021,0.0771741581079447,0.437119121007915,0.940634592723046,0.490296643507811,1.41405928260976,0.785233868459781,0,0.4226557275834,3.0586880643807,0.751871343838829,0.0644578879735772,2.29864658627337,2.85686301769052,4.94052820401969,2.40724100067505,0,0,0,1.26217249754548,0.611923411718232,0,0,1.11598505450025,0.462175628631418,0.865253124247578,0.252332849670158,2.84090487105608,0.380095503034311,1.93778776509765,2.13773924212448,1.01084389488329,1.25353769646188,0.303114792872958,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.516711278688049,0.248298857183432,1.34558235096736,0,0.202117188958219,1.08858373948481,0,0.336760265072938,0.860666464712116,0.332660356546013,1.79087190944144,0.533636729388577,0,0.808426818959282,0,0.122241444182866,0,0,0.805095174364105,3.52625341533556 | |||
|short_description=p4@RPL19 | |||
}} |
Revision as of 14:58, 20 January 2014
Short description: | p4@RPL19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPL19_5end |
Coexpression cluster: | NA |
Association with transcript: | 231bp_to_uc002hrr.1_5end |
EntrezGene: | RPL19 |
HGNC: | 10312 |
UniProt: | Q8IWR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.71e-19 | 250 |
epithelial cell | 4.48e-18 | 253 |
mesodermal cell | 1.81e-16 | 121 |
squamous epithelial cell | 1.48e-12 | 63 |
lining cell | 3.76e-09 | 58 |
barrier cell | 3.76e-09 | 58 |
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |
vascular associated smooth muscle cell | 1.36e-08 | 32 |
muscle precursor cell | 3.46e-08 | 58 |
myoblast | 3.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.46e-08 | 58 |
muscle cell | 8.06e-08 | 55 |
electrically responsive cell | 1.65e-07 | 61 |
electrically active cell | 1.65e-07 | 61 |
blood vessel endothelial cell | 2.14e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.14e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.01e-15 | 239 |
cancer | 1.56e-14 | 235 |
organ system cancer | 9.74e-09 | 137 |
hematologic cancer | 3.47e-08 | 51 |
immune system cancer | 3.47e-08 | 51 |