FFCP PHASE1:Hg19::chr17:48167005..48167029,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:48167005..48167029,+ | |||
|id=chr17:48167005..48167029,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-19!254;CL:0002076!3.34e-12!43;CL:0000220!1.58e-09!246;CL:0000223!1.79e-09!59;CL:0002321!2.94e-09!248;CL:0002368!2.89e-07!13;CL:0000077!3.56e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.65e-17;13!CL:0002076;1.17e-11;42!CL:0002231;3.42e-10;3!CL:0000307;7.61e-10;3!CL:0002174;9.07e-08;1!CL:0000501;9.07e-08;1!CL:0000306;1.49e-07;4!CL:0002222;1.49e-07;4!CL:0002224;1.49e-07;4!CL:0002202;4.09e-07;9!CL:0002632;4.09e-07;9!CL:0000362;5.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.34e-17,13;CL:0002076,5.35e-17,42;CL:0000223,9.40e-12,58;CL:0000066,2.70e-11,253;CL:0002231,3.36e-10,3;CL:0000068,7.15e-10,3;CL:0000069,7.15e-10,3;CL:0000307,7.15e-10,3;CL:0000377,7.15e-10,3;CL:0002174,1.18e-07,1;CL:0000501,1.18e-07,1;CL:0000306,1.31e-07,4;CL:0002222,1.31e-07,4;CL:0002224,1.31e-07,4;CL:0002321,3.91e-07,250;CL:0002202,4.90e-07,9;CL:0002632,4.90e-07,9;CL:0000362,6.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;7.61e-10;3!CL:0000223;1.42e-08;58 | |||
|ontology_enrichment_disease=DOID:193!6.12e-08!29;DOID:120!1.13e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;2.96e-09;31!UBERON:0007195;9.07e-08;1!UBERON:0010077;1.49e-07;4!UBERON:0005389;1.49e-07;4!UBERON:0000484;1.49e-07;4!UBERON:0000965;1.49e-07;4!UBERON:0001803;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.31e-07,4;UBERON:0005389,1.31e-07,4;UBERON:0000484,1.31e-07,4;UBERON:0002546,1.31e-07,4;UBERON:0000965,1.31e-07,4;UBERON:0001803,1.31e-07,4;UBERON:0003073,1.31e-07,4;UBERON:0005426,1.31e-07,4;UBERON:0007195,1.64e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,2.09340350391728,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.612002073732759,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,2.71334303258876,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,1.35282597214308,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.514703430895577,1.31700342490351,1.1240175325762,0.301586917234893,0.277765335475589,0,1.03993478527958,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.708875486211932,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0.763976851116555,1.17217447210047,0,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.718874566474748,0,0,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.713715955188647,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,3.80962293576241,4.05156351317944,0,0,0,0.451199612907412,0.308061348417659,1.56869953835371,0,0.422206515571503,1.13733384070897,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,1.30151357865721,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0.145016693914229,0,0,1.98341898433174,1.72971060628596,0.893288987462089,1.2138933702666,0,0.62962469366128,0,0,0,0.869932992075073,0.55597265731176,0,0,0,0.38126038784765,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,1.34060455107157,3.26672954583968,0.0941438007767792,1.29151611801369,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.449341755736634,0,0,0,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0,0.227884111694002,0.23056390438806,0.0897576444097721,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0.941798755221676,0,0.284609546029793,0.416024019039416,0.347119476670262,0.293977192243133,0.261177619741208,0.34945333648406,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0.49701014226173,0.707082103850386,0.407712618220842,0.523014231561666,0,0.288950589901519,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0.211200673038813,0.179287339332845,0.191915197319445,0,0,0,0,0,0.653174720218818,2.39460383124975,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0.570930667089935,0.941063278792687,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0.155262956876259,0,0,1.5652351854352,0.601030435988874,0.761610424337591,0.406870733204662,0,0.214821114084977,0,0.796191777397232,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,1.04397716786085,0.226705925512272,0,0.734210113519403,1.79088841081487,0.617602894321944,0.219284049578707,0.706756583783524,0.38582807654183,0.675769762612291,0.256241518587947,0,0,0,0,0,0,1.31043939538565,0,0.422624246717254,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.818859587550484,0.295712172434091,0,0.781078098613847,0.413373593002368,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0.236387681767936,0.333694205676207,0.078493092850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| |||
|short_description=p@chr17:48167005..48167029,+ | |||
}} |
Revision as of 16:09, 20 January 2014
Short description: | p@chr17:48167005..48167029, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr17:48167005..48167029, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.34e-17 | 13 |
endo-epithelial cell | 5.35e-17 | 42 |
endodermal cell | 9.40e-12 | 58 |
epithelial cell | 2.70e-11 | 253 |
epithelial cell of prostate | 3.36e-10 | 3 |
duct epithelial cell | 7.15e-10 | 3 |
branched duct epithelial cell | 7.15e-10 | 3 |
tracheal epithelial cell | 7.15e-10 | 3 |
tracheoblast | 7.15e-10 | 3 |
follicular cell of ovary | 1.18e-07 | 1 |
granulosa cell | 1.18e-07 | 1 |
crystallin accumulating cell | 1.31e-07 | 4 |
vertebrate lens cell | 1.31e-07 | 4 |
lens epithelial cell | 1.31e-07 | 4 |
embryonic cell | 3.91e-07 | 250 |
epithelial cell of tracheobronchial tree | 4.90e-07 | 9 |
epithelial cell of lower respiratory tract | 4.90e-07 | 9 |
epidermal cell | 6.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.31e-07 | 4 |
transparent eye structure | 1.31e-07 | 4 |
simple cuboidal epithelium | 1.31e-07 | 4 |
cranial placode | 1.31e-07 | 4 |
lens of camera-type eye | 1.31e-07 | 4 |
epithelium of lens | 1.31e-07 | 4 |
lens placode | 1.31e-07 | 4 |
lens vesicle | 1.31e-07 | 4 |
stroma of bone marrow | 1.64e-07 | 1 |