FFCP PHASE1:Hg19::chr17:78105912..78105918,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr17:78105912..78105918,- | |||
|id=chr17:78105912..78105918,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.78e-26;1!CL:0000911;2.78e-26;1!CL:0000814;2.78e-26;1!CL:0000306;1.75e-07;4!CL:0002222;1.75e-07;4!CL:0002224;1.75e-07;4!CL:0000243;9.10e-07;15!CL:0000125;9.10e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.78e-26,1;CL:0000914,2.78e-26,1;CL:0000911,2.78e-26,1;CL:0000814,2.78e-26,1;CL:0002042,2.78e-26,1;CL:0002039,2.78e-26,1;CL:0002040,2.78e-26,1;CL:0002041,2.78e-26,1;CL:0000893,7.30e-14,2;CL:0002489,7.30e-14,2;CL:0000809,7.30e-14,2;CL:0000808,7.30e-14,2;CL:0000894,7.30e-14,2;CL:0000806,7.30e-14,2;CL:0000807,7.30e-14,2;CL:0000805,7.30e-14,2;CL:0002425,7.30e-14,2;CL:0000306,1.80e-07,4;CL:0002222,1.80e-07,4;CL:0002224,1.80e-07,4;CL:0000243,8.59e-07,15;CL:0000125,8.59e-07,15;CL:0000030,8.59e-07,15;CL:0000339,8.59e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002425;7.30e-14;2!UBERON:0006238;5.79e-10;10!UBERON:0009847;1.47e-09;3!UBERON:0003353;1.47e-09;3!CL:0000339;9.10e-07;15 | |||
|ontology_enrichment_disease=DOID:162!6.76e-25!235;DOID:14566!2.22e-24!239;DOID:0050687!9.69e-18!143;DOID:305!3.14e-15!106;DOID:0050686!5.12e-13!137;DOID:3905!2.53e-07!9;DOID:1324!6.81e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3093;3.27e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.01e-09,11 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.75e-07;4!UBERON:0005389;1.75e-07;4!UBERON:0000484;1.75e-07;4!UBERON:0000965;1.75e-07;4!UBERON:0001803;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4;UBERON:0010077,1.80e-07,4;UBERON:0005389,1.80e-07,4;UBERON:0000484,1.80e-07,4;UBERON:0002546,1.80e-07,4;UBERON:0000965,1.80e-07,4;UBERON:0001803,1.80e-07,4;UBERON:0003073,1.80e-07,4;UBERON:0005426,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0.387336002901508,0.284338464974843,0,0.553995408531877,0.401088894940283,0,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.276149695926898,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.432807638929335,0.355709216742071,0.318852545457645,0,0,0.211673582723883,0,0,0.456469358066384,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.445234820091624,0,8.86726714137573,0.19924798825107,0,0,0,1.6001024709939,0,0.539210106883961,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0,0.874813840149763,0.347249989866585,0,0,0,0,0.591095237907095,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0,0,0.948768663620925,0.476809736941136,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0.208843899010911,0,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0.391969589657511,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0,0,0,0,0.137041924646751,0,0,0,0.240476460754601,0,0,0.288180834308212,0,0.343189995723929,0.288109595976299,0.372757606696298,0.235694034616795,0.135904206073614,0.523014231561666,1.4279750469085,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.0674035438541849,0.492137407573744,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0,0.316801009558219,0.179287339332845,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,1.38348634936231,0,0,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0.127894371303652,0,0.314531883711793,0.109209638192014,0,0.212574920101683,0.495743057036009,0,0,0.630893960010027,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0,0.161475645631851,0,0.196295437002051,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0.40341013740704,0,0.785720083444267,0.327543835020193,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,1.00108261702862,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0.23248285073625,0.695433089210318,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.392600934460972,0,0,0,0,0,0,0.596852325484105,0,0.22589216407792,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0.0802413666891683,0,0,0.286679166302903,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr17:78105912..78105918,- | |||
}} |
Revision as of 17:51, 20 January 2014
Short description: | p@chr17:78105912..78105918, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:78105912..78105918, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.78e-26 | 1 |
immature NK T cell | 2.78e-26 | 1 |
effector T cell | 2.78e-26 | 1 |
mature NK T cell | 2.78e-26 | 1 |
immature NK T cell stage IV | 2.78e-26 | 1 |
immature NK T cell stage I | 2.78e-26 | 1 |
immature NK T cell stage II | 2.78e-26 | 1 |
immature NK T cell stage III | 2.78e-26 | 1 |
thymocyte | 7.30e-14 | 2 |
double negative thymocyte | 7.30e-14 | 2 |
double-positive, alpha-beta thymocyte | 7.30e-14 | 2 |
DN4 thymocyte | 7.30e-14 | 2 |
DN1 thymic pro-T cell | 7.30e-14 | 2 |
DN2 thymocyte | 7.30e-14 | 2 |
DN3 thymocyte | 7.30e-14 | 2 |
immature single positive thymocyte | 7.30e-14 | 2 |
early T lineage precursor | 7.30e-14 | 2 |
crystallin accumulating cell | 1.80e-07 | 4 |
vertebrate lens cell | 1.80e-07 | 4 |
lens epithelial cell | 1.80e-07 | 4 |
glial cell (sensu Vertebrata) | 8.59e-07 | 15 |
glial cell | 8.59e-07 | 15 |
glioblast | 8.59e-07 | 15 |
glioblast (sensu Vertebrata) | 8.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.40e-07 | 4 |
hemolymphoid system gland | 1.40e-07 | 4 |
thymic region | 1.40e-07 | 4 |
pharyngeal gland | 1.40e-07 | 4 |
thymus primordium | 1.40e-07 | 4 |
cuboidal epithelium | 1.80e-07 | 4 |
transparent eye structure | 1.80e-07 | 4 |
simple cuboidal epithelium | 1.80e-07 | 4 |
cranial placode | 1.80e-07 | 4 |
lens of camera-type eye | 1.80e-07 | 4 |
epithelium of lens | 1.80e-07 | 4 |
lens placode | 1.80e-07 | 4 |
lens vesicle | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.01e-09 | 11 |