FFCP PHASE1:Hg19::chr18:2846972..2847027,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19881 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXX0 | |||
|association_with_transcript=0bp_to_ENST00000254528,ENST00000308080,NM_032048,uc002kln.2_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_EMILIN2_5end | |||
|id=chr18:2846972..2847027,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.39e-37!76;CL:0000763!1.86e-35!112;CL:0000049!1.86e-35!112;CL:0000557!2.82e-34!71;CL:0000839!1.25e-32!70;CL:0002009!1.72e-30!65;CL:0002194!3.63e-30!63;CL:0000576!3.63e-30!63;CL:0000040!3.63e-30!63;CL:0000559!3.63e-30!63;CL:0002057!2.02e-28!42;CL:0000134!1.94e-27!358;CL:0002320!4.15e-27!365;CL:0000860!3.02e-24!45;CL:0000048!2.11e-23!430;CL:0000219!4.11e-23!390;CL:0000034!4.51e-22!444;CL:0000988!6.78e-22!182;CL:0000723!2.40e-21!436;CL:0000037!5.70e-21!172;CL:0000566!5.70e-21!172;CL:0000738!1.07e-19!140;CL:0002032!1.60e-19!165;CL:0000837!1.60e-19!165;CL:0002031!1.04e-14!124;CL:0002087!3.76e-13!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.76e-23;33!CL:0002057;4.76e-23;33!CL:0000473;9.04e-23;39!CL:0000234;9.04e-23;39!CL:0000576;7.48e-22;48!CL:0000766;1.74e-19;69!CL:0000763;4.99e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.03e-46,72;CL:0000557,7.99e-43,67;CL:0000763,2.68e-42,108;CL:0000049,2.68e-42,108;CL:0000839,2.86e-40,66;CL:0002009,1.39e-38,61;CL:0002194,2.60e-38,59;CL:0000576,2.60e-38,59;CL:0000040,2.60e-38,59;CL:0000559,2.60e-38,59;CL:0000473,3.67e-35,48;CL:0000234,3.67e-35,48;CL:0000860,5.57e-31,42;CL:0002057,5.57e-31,42;CL:0000134,1.38e-27,354;CL:0002320,3.49e-27,361;CL:0000988,1.86e-25,177;CL:0000037,1.33e-24,168;CL:0000738,1.21e-23,136;CL:0000048,2.95e-23,427;CL:0002032,7.34e-23,161;CL:0000837,7.34e-23,161;CL:0000219,3.64e-22,386;CL:0000723,1.24e-21,433;CL:0000034,1.37e-21,441;CL:0002031,1.20e-17,120;CL:0002087,4.98e-16,115;CL:0002393,4.14e-07,9;CL:0002397,4.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-22;42!CL:0000049;2.85e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-32!102;UBERON:0003061!2.56e-32!102;UBERON:0002371!1.22e-28!80;UBERON:0002193!4.18e-28!112;UBERON:0002384!2.43e-26!375;UBERON:0001474!9.87e-26!86;UBERON:0004765!2.64e-21!101;UBERON:0001434!2.64e-21!101;UBERON:0002405!2.51e-18!115;UBERON:0002204!5.69e-17!167;UBERON:0003081!1.81e-15!216;UBERON:0000479!1.15e-09!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.77e-07;15!UBERON:0000179;9.77e-07;15!UBERON:0000463;9.77e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.75e-39,98;UBERON:0003061,1.75e-39,98;UBERON:0002371,6.64e-36,76;UBERON:0002193,7.88e-35,108;UBERON:0001474,1.69e-31,82;UBERON:0002405,6.25e-29,93;UBERON:0002384,8.97e-27,371;UBERON:0004765,3.18e-26,90;UBERON:0001434,1.62e-24,100;UBERON:0003081,1.16e-21,203;UBERON:0000926,2.06e-21,315;UBERON:0004120,2.06e-21,315;UBERON:0006603,2.06e-21,315;UBERON:0002204,1.14e-19,167;UBERON:0000479,5.84e-12,773 | |||
|phase1_expression=16.7144108928912,12.846031433459,14.3773492177891,9.00659685178174,9.83314407740033,5.23403114460221,5.06599756336621,6.31719873426831,22.4619640251861,0.245733936501509,0,76.8913629898206,20.3100573235909,0,0,1.34465029290355,0,2.19093027116212,0,1.47745269692145,3.06001036866379,0,0.572471974262113,0.547497700291537,1.75759695432724,0,0.164201178899891,0,140.03768255821,53.3522863355126,109.764631431098,0,0,0,0,0,29.6536443728196,162.874650108372,127.14517969607,129.772500688079,95.6119075004477,104.293760458111,99.1665935391618,153.68593839,142.83710671437,139.97100330537,191.289097373378,176.391023961363,210.910038579566,258.923153089935,224.652939626021,216.854204807833,225.463675201749,204.618644696073,199.076935293682,173.559437058282,165.108220784997,150.115287609317,263.538231331347,233.31540268432,253.17750181642,223.96903282678,223.598760193849,182.850417978526,328.516858127557,292.203390715937,254.73429983919,237.681237332879,211.200581960182,224.13888773568,204.019632387445,242.694962115805,231.650467606727,92.7410706909425,97.3727693839899,100.426491198512,115.810818712036,99.1167492753942,122.151445889781,95.4792691533183,83.942837778016,90.9667485747877,0,1.63841583378639,0.889509253863555,4.26730222566507,1.20118796110804,1.14950487990897,0.661044872784862,0,9.10740750575117,14.6809297342735,14.5263826687587,3.96513985737078,26.3439024601322,15.5396610017295,1.180258620683,0.786021525498329,0.822405995998037,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0.34362744548263,0,1.59282707162048,0,0,7.37818083481087,4.35154477925022,1.24930726552346,5.20909954496837,0,0.201606743224732,0,0.144824403882799,2.43806866313962,9.38981203585091,10.4847300711695,1.44575660953827,4.51204119572301,2.462390822334,0,1.45990461090791,1.32348744029695,0.665188192387692,1.31752178539689,5.50112117090393,0,0,118.784346077614,93.6817986670058,99.8514283496677,13.1169843367938,4.0039643754609,7.4291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,10.5424333948851,19.3890132074163,0,4.47274756525787,1.01304409331664,0.132409180813219,9.46560848471085,5.32002573297536,14.5776176037,1.06748995729705,6.41335625884616,11.8260193451911,4.31074150623002,0.980771418680752,3.63257826347835,2.88087962239999,10.5444644325208,10.9256026890612,1.71141546463335,6.87463930538285,15.971091815552,20.5578639347527,18.679957291399,0.204154171254893,1.71968044236475,1.54988671763648,1.18800285728205,0.989067717114227,1.82032272387605,2.87447256726495,2.86171393721913,5.12985931475053,0.554128230968366,0.438977620880838,0.612975591598039,1.35214253015937,1.36118619792025,35.5191478663947,14.7354598284812,7.2056846394251,19.8060123415706,7.52283463440604,9.01741890159702,5.02515512095292,7.76371128309825,2.14361411354637,33.068824425979,15.2802831746217,1.93975268182574,30.5308249564288,15.7173273235119,12.8866050155971,0,0,0,0.853815942907168,0.397589304964456,0.929551542956147,2.38420426535352,0.504641701751257,0.72995471815166,7.8224766164908,11.5783368874719,9.66944449467364,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,4.20725321410337,13.9935163852676,2.94017422771084,0,0.982827216677626,0.590789906681404,0,0.860919069801795,2.40194934417936,0,0,0,0,2.6064664424826,1.03993478527958,2.88662684050547,3.70977295920246,2.58299127318808,0,0,0,0,0,149.946156707225,132.914422599087,114.891888449187,0,0,0,0,0,0.383382679165211,40.8910487453633,49.483219915433,211.060021620506,193.697217392396,196.433226411447,0.507983154337352,4.58386110669933,0,1.71072446022705,0.925447434329912,0,0.285826432630578,25.0052318090154,28.3374044741632,23.1748983194202,0,21.4593867511129,4.22651376278,0.531876233169741,1.04007436911366,0,0,0.266422179016099,1.28680194292333,0,0,10.0978217131058,1.42156779497018,0,3.01439377059586,0,0.499864955910285,161.759628252783,169.260639812627,170.775490981256,30.432356647431,18.3779097334582,1.42636905040718,3.76431397335706,0.205476322550383,0,0,6.5020150866636,1.72502059887614,6.16046574142792,0,0,0.773288812777695,0.502548796003046,1.27587750330633,17.2271615507852,11.966458368161,34.3964876151909,1.2269149171914,1.00034104211935,0.813795071099207,0,0,0,0,0,0,3.10419213877515,0.664225598535437,0.737476674166813,12.8587749412763,13.1186775500036,7.20601190002797,35.1505644408909,45.0842679710909,36.6075523265814,87.603868147969,46.6019230629392,83.1573306656621,6.4508030032882,7.366174717827,5.3325417942284,15.3766979106841,6.65219423786715,5.46903331888265,5.93672265779964,5.39733928309294,6.92490728721196,7.2271897292152,2.59627214591811,7.66988497835731,1.57117284469109,0,0,2.87036120411517,0.182091168006717,0.655622074797121,0,0.15403067420883,0,1.46139224653261,0.316654886678627,1.13733384070897,0.340187410553031,1.29549549661284,0,0.270946437543853,0.501689773854853,0,0,0,0.877039506583738,2.3529190592241,0,0.656029291399411,0,11.3345112812494,0.6409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| |||
|short_description=p1@EMILIN2 | |||
}} |
Revision as of 18:18, 20 January 2014
Short description: | p1@EMILIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMILIN2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000254528, ENST00000308080, NM_032048, uc002kln.2_5end |
EntrezGene: | EMILIN2 |
HGNC: | 19881 |
UniProt: | Q9BXX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.03e-46 | 72 |
granulocyte monocyte progenitor cell | 7.99e-43 | 67 |
myeloid cell | 2.68e-42 | 108 |
common myeloid progenitor | 2.68e-42 | 108 |
myeloid lineage restricted progenitor cell | 2.86e-40 | 66 |
macrophage dendritic cell progenitor | 1.39e-38 | 61 |
monopoietic cell | 2.60e-38 | 59 |
monocyte | 2.60e-38 | 59 |
monoblast | 2.60e-38 | 59 |
promonocyte | 2.60e-38 | 59 |
defensive cell | 3.67e-35 | 48 |
phagocyte | 3.67e-35 | 48 |
classical monocyte | 5.57e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.57e-31 | 42 |
mesenchymal cell | 1.38e-27 | 354 |
connective tissue cell | 3.49e-27 | 361 |
hematopoietic cell | 1.86e-25 | 177 |
hematopoietic stem cell | 1.33e-24 | 168 |
leukocyte | 1.21e-23 | 136 |
multi fate stem cell | 2.95e-23 | 427 |
hematopoietic oligopotent progenitor cell | 7.34e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.34e-23 | 161 |
motile cell | 3.64e-22 | 386 |
somatic stem cell | 1.24e-21 | 433 |
stem cell | 1.37e-21 | 441 |
hematopoietic lineage restricted progenitor cell | 1.20e-17 | 120 |
nongranular leukocyte | 4.98e-16 | 115 |
intermediate monocyte | 4.14e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.75e-39 | 98 |
blood island | 1.75e-39 | 98 |
bone marrow | 6.64e-36 | 76 |
hemolymphoid system | 7.88e-35 | 108 |
bone element | 1.69e-31 | 82 |
immune system | 6.25e-29 | 93 |
connective tissue | 8.97e-27 | 371 |
skeletal element | 3.18e-26 | 90 |
skeletal system | 1.62e-24 | 100 |
lateral plate mesoderm | 1.16e-21 | 203 |
mesoderm | 2.06e-21 | 315 |
mesoderm-derived structure | 2.06e-21 | 315 |
presumptive mesoderm | 2.06e-21 | 315 |
musculoskeletal system | 1.14e-19 | 167 |
tissue | 5.84e-12 | 773 |