FFCP PHASE1:Hg19::chr18:5197241..5197266,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=642597 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28285 | |||
|TSSclassifier=strong | |||
|UniProt=P0CW23 | |||
|association_with_transcript=0bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_C18orf42_5end | |||
|id=chr18:5197241..5197266,- | |||
|ontology_enrichment_celltype=CL:0000047!1.19e-08!8;CL:0000540!1.28e-07!6;CL:0000031!1.28e-07!6;CL:0000404!1.28e-07!6;CL:0000242!6.48e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.66e-20;2!CL:0000242;3.66e-20;2!CL:0000540;8.12e-15;6!CL:0000404;8.12e-15;6!CL:0002319;2.44e-12;25!CL:0002581;9.96e-11;1!CL:0000312;1.27e-08;5!CL:0000240;2.53e-07;6!CL:0000311;2.53e-07;6!CL:0000079;2.53e-07;6!CL:0000237;2.53e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.33e-20,2;CL:0000047,1.93e-19,8;CL:0000540,6.41e-15,6;CL:0000031,6.41e-15,6;CL:0000404,6.41e-15,6;CL:0002319,2.16e-12,25;CL:0002581,8.22e-11,1;CL:0000312,1.22e-08,5;CL:0000240,2.45e-07,6;CL:0000311,2.45e-07,6;CL:0000079,2.45e-07,6;CL:0000237,2.45e-07,6;CL:0000036,2.45e-07,6;CL:0000357,2.45e-07,6;CL:0000114,2.45e-07,6;CL:0000133,5.26e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.81e-30;3!CL:0000031;8.12e-15;6!UBERON:0006222;9.96e-11;1!CL:0000357;2.53e-07;6!CL:0000114;2.53e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-44!57;UBERON:0005068!2.21e-44!57;UBERON:0006241!2.21e-44!57;UBERON:0007135!2.21e-44!57;UBERON:0001017!4.06e-43!82;UBERON:0005743!8.10e-43!86;UBERON:0000073!4.85e-42!94;UBERON:0001016!4.85e-42!94;UBERON:0002616!1.03e-39!59;UBERON:0000955!2.76e-34!69;UBERON:0006238!2.76e-34!69;UBERON:0002780!1.41e-32!41;UBERON:0001890!1.41e-32!41;UBERON:0006240!1.41e-32!41;UBERON:0003075!4.29e-32!86;UBERON:0007284!4.29e-32!86;UBERON:0003080!1.19e-31!42;UBERON:0002346!3.21e-30!90;UBERON:0004121!4.99e-26!169;UBERON:0002619!2.32e-25!22;UBERON:0000924!3.91e-25!173;UBERON:0006601!3.91e-25!173;UBERON:0007023!9.06e-23!115;UBERON:0002020!5.67e-22!34;UBERON:0003528!5.67e-22!34;UBERON:0000956!6.18e-22!25;UBERON:0000203!6.18e-22!25;UBERON:0001893!6.54e-22!34;UBERON:0003056!1.51e-21!61;UBERON:0001869!3.71e-21!32;UBERON:0001950!5.60e-21!20;UBERON:0000033!2.52e-20!123;UBERON:0002791!3.61e-20!33;UBERON:0000153!6.36e-19!129;UBERON:0007811!6.36e-19!129;UBERON:0001894!7.99e-14!7;UBERON:0006222!7.99e-14!7;UBERON:0004733!9.39e-14!12;UBERON:0002028!9.39e-14!12;UBERON:0007277!9.39e-14!12;UBERON:0003076!1.45e-13!15;UBERON:0003057!1.45e-13!15;UBERON:0004732!1.42e-12!13;UBERON:0002680!1.22e-10!9;UBERON:0001895!1.22e-10!9;UBERON:0010092!1.22e-10!9;UBERON:0000025!2.17e-10!194;UBERON:0002021!3.60e-09!5;UBERON:0000349!5.93e-09!5;UBERON:0000988!2.63e-08!3;UBERON:0004111!2.70e-08!241;UBERON:0002298!3.36e-08!8;UBERON:0001871!1.15e-07!7;UBERON:0000477!1.35e-07!286;UBERON:0003296!7.10e-07!4;UBERON:0010133!7.10e-07!4;UBERON:0000200!7.69e-07!6;UBERON:0001954!9.83e-07!2;UBERON:0003022!9.83e-07!2;UBERON:0002421!9.83e-07!2;UBERON:0002600!9.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;4.50e-20;12!UBERON:0002028;4.50e-20;12!UBERON:0001905;1.05e-19;2!UBERON:0002757;1.05e-19;2!UBERON:0010134;1.05e-19;2!UBERON:0005408;1.05e-19;2!UBERON:0001899;1.05e-19;2!UBERON:0004732;1.59e-18;13!UBERON:0002037;1.84e-15;6!UBERON:0000073;1.84e-14;53!UBERON:0002616;1.84e-14;53!UBERON:0001896;1.81e-13;3!UBERON:0005290;1.81e-13;3!UBERON:0001894;1.21e-12;7!UBERON:0002680;1.73e-10;9!UBERON:0001895;1.73e-10;9!UBERON:0003296;2.48e-10;4!UBERON:0010133;2.48e-10;4!UBERON:0002784;2.48e-10;4!UBERON:0000955;6.23e-10;68!UBERON:0001016;4.43e-09;83!UBERON:0002021;1.42e-08;5!UBERON:0002780;2.01e-08;41!UBERON:0001890;2.01e-08;41!UBERON:0001017;1.51e-07;75!UBERON:0002298;3.57e-07;6!UBERON:0002619;8.81e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.01e-30,89;UBERON:0001017,2.16e-30,81;UBERON:0001049,5.82e-26,56;UBERON:0005068,5.82e-26,56;UBERON:0006241,5.82e-26,56;UBERON:0007135,5.82e-26,56;UBERON:0000073,2.13e-23,53;UBERON:0002616,2.13e-23,53;UBERON:0003076,1.41e-22,15;UBERON:0003057,1.41e-22,15;UBERON:0004733,4.88e-20,12;UBERON:0002028,4.88e-20,12;UBERON:0007277,4.88e-20,12;UBERON:0001905,2.06e-19,2;UBERON:0002757,2.06e-19,2;UBERON:0010134,2.06e-19,2;UBERON:0005408,2.06e-19,2;UBERON:0001899,2.06e-19,2;UBERON:0004121,4.76e-19,171;UBERON:0000924,4.76e-19,171;UBERON:0006601,4.76e-19,171;UBERON:0004732,1.71e-18,13;UBERON:0010371,6.34e-18,104;UBERON:0000955,1.25e-17,68;UBERON:0006238,1.25e-17,68;UBERON:0003075,3.38e-17,82;UBERON:0007284,3.38e-17,82;UBERON:0002346,2.60e-16,86;UBERON:0002037,1.84e-15,6;UBERON:0006215,1.84e-15,6;UBERON:0001896,2.06e-13,3;UBERON:0005290,2.06e-13,3;UBERON:0010096,2.06e-13,3;UBERON:0001894,1.60e-12,7;UBERON:0006222,1.60e-12,7;UBERON:0011216,8.11e-11,223;UBERON:0002680,1.73e-10,9;UBERON:0001895,1.73e-10,9;UBERON:0010092,1.73e-10,9;UBERON:0002780,2.88e-10,41;UBERON:0001890,2.88e-10,41;UBERON:0003080,2.88e-10,41;UBERON:0006240,2.88e-10,41;UBERON:0003296,3.44e-10,4;UBERON:0010133,3.44e-10,4;UBERON:0002784,3.44e-10,4;UBERON:0010314,5.97e-10,132;UBERON:0002021,1.66e-08,5;UBERON:0007023,2.42e-08,114;UBERON:0002298,3.80e-07,6;UBERON:0002619,8.15e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,2.31986643833309,1.67516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,6.10326945268333,12.6060356321596,7.97978571174578,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.40558667435203,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.953423842781029,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,1.55300672151593,1.1177352529449,0,0,0,0,0,5.1516839638757,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04630994085843,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.385375350578757,0,0.478901577171454,1.23069818544453,2.01657356977374,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0,0.317079050969534,1.64092442705466,0,0,0,0,1.07140367175657,1.3451348888753,0.606965604236632,0,0,0,0,0.611727596791485,0.263091094251396,0,0,0,0,0.280272163313789,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p2@C18orf42 | |||
}} |
Revision as of 18:25, 20 January 2014
Short description: | p2@C18orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C18orf42_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000434239, NM_001145194, uc010wzc.1_5end |
EntrezGene: | C18orf42 |
HGNC: | 28285 |
UniProt: | P0CW23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.33e-20 | 2 |
neuronal stem cell | 1.93e-19 | 8 |
neuron | 6.41e-15 | 6 |
neuroblast | 6.41e-15 | 6 |
electrically signaling cell | 6.41e-15 | 6 |
neural cell | 2.16e-12 | 25 |
perirenal preadipocyte | 8.22e-11 | 1 |
keratinocyte | 1.22e-08 | 5 |
stratified squamous epithelial cell | 2.45e-07 | 6 |
keratin accumulating cell | 2.45e-07 | 6 |
stratified epithelial cell | 2.45e-07 | 6 |
keratinizing barrier epithelial cell | 2.45e-07 | 6 |
epithelial fate stem cell | 2.45e-07 | 6 |
stratified epithelial stem cell | 2.45e-07 | 6 |
surface ectodermal cell | 2.45e-07 | 6 |
neurectodermal cell | 5.26e-07 | 59 |