FFCP PHASE1:Hg19::chr19:45260775..45260838,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000474300_5end | |||
|description=CAGE_peak_5_at_BCL3_5end | |||
|id=chr19:45260775..45260838,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.30e-19!180;CL:0000183!9.09e-19!59;CL:0000680!4.28e-17!57;CL:0000056!4.28e-17!57;CL:0000355!4.28e-17!57;CL:0000187!4.43e-17!54;CL:0000393!7.26e-16!60;CL:0000211!7.26e-16!60;CL:0000192!5.39e-11!42;CL:0000514!5.39e-11!42;CL:0000222!5.18e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000187;4.15e-10;55!CL:0000393;2.55e-09;61!CL:0000211;2.55e-09;61!CL:0000188;4.10e-07;9!CL:0000192;4.28e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,7.96e-17,55;CL:0000680,1.59e-16,58;CL:0000056,1.59e-16,58;CL:0000355,1.59e-16,58;CL:0000393,3.18e-14,61;CL:0000211,3.18e-14,61;CL:0000222,7.25e-12,121;CL:0000192,5.24e-10,43;CL:0000514,5.24e-10,43;CL:0000188,3.76e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;1.30e-09;58!CL:0000514;4.28e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!9.91e-21!312;UBERON:0000481!4.23e-20!347;UBERON:0000483!1.59e-19!309;UBERON:0002385!7.51e-19!63;UBERON:0001015!7.51e-19!63;UBERON:0000383!7.51e-19!63;UBERON:0001134!4.57e-18!61;UBERON:0002036!4.57e-18!61;UBERON:0003082!4.57e-18!61;UBERON:0004290!1.26e-17!70;UBERON:0000914!3.04e-17!83;UBERON:0002329!3.04e-17!83;UBERON:0003077!3.04e-17!83;UBERON:0003059!3.04e-17!83;UBERON:0007282!3.04e-17!83;UBERON:0009618!3.04e-17!83;UBERON:0007285!3.04e-17!83;UBERON:0005256!7.61e-17!143;UBERON:0000475!1.85e-16!365;UBERON:0000477!7.83e-14!286;UBERON:0000486!1.89e-13!82;UBERON:0007023!7.57e-13!115;UBERON:0003075!8.63e-13!86;UBERON:0007284!8.63e-13!86;UBERON:0000468!2.00e-12!659;UBERON:0000025!4.24e-12!194;UBERON:0002346!4.68e-12!90;UBERON:0004111!2.88e-11!241;UBERON:0004872!1.10e-10!84;UBERON:0002100!3.48e-10!216;UBERON:0000922!3.98e-10!612;UBERON:0003103!4.18e-10!69;UBERON:0000467!7.63e-10!625;UBERON:0000480!1.15e-09!626;UBERON:0002050!1.71e-09!605;UBERON:0005423!1.71e-09!605;UBERON:0000923!2.09e-09!604;UBERON:0005291!2.09e-09!604;UBERON:0006598!2.09e-09!604;UBERON:0002532!2.09e-09!604;UBERON:0000479!3.17e-09!787;UBERON:0002049!4.89e-09!79;UBERON:0007798!4.89e-09!79;UBERON:0000490!6.83e-09!138;UBERON:0000064!7.19e-09!219;UBERON:0003104!9.56e-09!238;UBERON:0009142!9.56e-09!238;UBERON:0003914!1.06e-08!118;UBERON:0001009!1.61e-07!113;UBERON:0002616!1.63e-07!59;UBERON:0003064!2.94e-07!37;UBERON:0003056!3.70e-07!61;UBERON:0004535!6.28e-07!110;UBERON:0000033!6.77e-07!123;UBERON:0002200!6.83e-07!11;UBERON:0006876!6.83e-07!11;UBERON:0004121!8.21e-07!169;UBERON:0007100!9.99e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.24e-08;11!UBERON:0001134;7.66e-07;16!UBERON:0002036;7.66e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.91e-18,160;UBERON:0009142,1.91e-18,160;UBERON:0002385,4.42e-18,64;UBERON:0001015,4.42e-18,64;UBERON:0000383,4.42e-18,64;UBERON:0000119,3.16e-17,309;UBERON:0001134,3.50e-17,62;UBERON:0002036,3.50e-17,62;UBERON:0003082,3.50e-17,62;UBERON:0007503,1.46e-16,78;UBERON:0000483,5.10e-16,306;UBERON:0002329,2.22e-15,71;UBERON:0003059,2.22e-15,71;UBERON:0007282,2.22e-15,71;UBERON:0004290,2.22e-15,71;UBERON:0009618,2.22e-15,71;UBERON:0003077,6.79e-15,72;UBERON:0007285,6.79e-15,72;UBERON:0007524,2.00e-14,73;UBERON:0005256,1.76e-13,122;UBERON:0000486,2.84e-12,83;UBERON:0007023,2.01e-11,114;UBERON:0003103,2.02e-11,68;UBERON:0004111,1.20e-10,240;UBERON:0010314,1.21e-10,132;UBERON:0004872,1.42e-10,83;UBERON:0000025,2.26e-10,192;UBERON:0002100,5.69e-10,199;UBERON:0002049,2.95e-09,78;UBERON:0007798,2.95e-09,78;UBERON:0001009,8.82e-09,112;UBERON:0003914,1.32e-08,117;UBERON:0000479,2.28e-08,773;UBERON:0000490,2.52e-08,148;UBERON:0003075,2.97e-08,82;UBERON:0007284,2.97e-08,82;UBERON:0004535,4.54e-08,109;UBERON:0006876,5.65e-08,11;UBERON:0002346,1.16e-07,86;UBERON:0007100,2.93e-07,27;UBERON:0005423,7.23e-07,581 | |||
|phase1_expression=0,1.07050261945492,0.422863212287913,0,0,0,2.53299878168311,2.52687949370732,2.61185628199839,4.66894479352867,4.88460817580699,1.09220686065086,0.791300934685361,5.81701858912219,3.31397375727916,0.672325146451775,0,0,0.487932798790507,11.9427426334484,5.91602004608334,16.6131002383387,2.86235987131057,4.65373045247806,4.77062030460251,0.0764134057479513,0,0,0,0.383829398097213,0,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,12.1903433156981,7.37770945674,9.84541726195184,1.44575660953827,1.00267582127178,4.63508860674636,3.1811437882044,4.86634870302636,6.99557647014102,4.21285855178871,5.00658278450818,3.40545596294053,0.728590576585084,0.741568885568859,0,0,0.132957960518865,0,0.571994910780128,0,2.78267370313387,1.72046919021225,1.04142150482278,0.56530794192401,0,2.47606237746061,2.29894463190492,0,0,0,0,0,0,0,2.43042584364528,2.50039239195423,2.46982309888787,4.50445921933289,0,3.79706263827252,0.732806975721629,0,0,0,0,2.5326102332916,0.264818361626438,1.72101972449288,5.32002573297536,3.92474320099615,0,1.48000529050296,8.09148692039392,1.48181739276657,1.47115712802113,7.11379909931178,2.88087962239999,10.0758215688533,0.624320153660641,1.1409436430889,0.597794722207204,0.939475989150119,1.13311061057692,0.280901613404497,1.83738754129404,3.4393608847295,2.27316718586684,0,0.247266929278557,13.6524204290704,22.9957805381196,2.18836948140286,3.37820003654303,2.21651292387346,3.07284334616587,0,0.300476117813194,2.1552114800404,1.07633781413317,2.56268866582281,0.211931901159562,0.600182192168805,1.03052529238439,0.257640540045629,0.744467425326359,0.337552664482532,1.26668106709558,0.757301322732344,0.736399189138395,1.13152239773168,0.710019185033229,0.604512589365842,3.73033303083073,0.193260853163297,0,0,0.487894824518382,0,1.16193942869518,0.829288440122964,1.7662459561294,0.36497735907583,0,10.935095949279,1.38134921352481,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,5.60967095213783,7.8199062152966,4.41026134156626,0,0,0.590789906681404,0,0,8.92152613552333,0.109750285408626,0,0.100528972411631,2.68506490959736,4.88712457965487,4.15973914111831,7.21656710126366,3.4779121492523,3.28744343860301,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,0,0,0,0,0,0,0.414656231081544,0.576479813667846,0.37872730027914,1.33345578013555,2.67391897890794,0,1.71072446022705,1.54241239054985,2.70308752059526,0.571652865261156,8.07343807286597,13.0788020649984,4.03360572015225,0.258543431515556,28.6125156681506,5.917119267892,1.06375246633948,0,5.14414748524284,4.25547396069835,3.72991050622539,3.71742783511184,3.25572963234866,8.23240336780769,4.88604276440603,0.710783897485092,11.087326221068,0,0,0.099972991182057,0,0,0,0,1.14861935834114,2.85273810081437,2.02693829334611,1.43833425785268,0.358121926479791,0,0.394061520403854,0.431255149719035,0,1.52456774533478,1.30139853857622,2.31986643833309,0.335032530668698,0,3.74503511973591,5.9832291840805,0,10.3060853044078,8.00272833695483,4.6115054028955,0.207970861530807,0.713715955188647,0,0.234282829985426,0.601892199455438,0,2.0694614258501,3.98535359121262,1.47495334833363,3.90976265106373,14.8808879671683,8.92172901908225,0,0,0.213455115606889,1.21251028578504,3.32870879020994,1.20956117331872,0.248107807818777,0.767309866440312,1.68396056659844,0.384417447767103,0,1.28683136914886,0,4.62629081407967,3.55123450626254,4.43486642474569,0.519254429183621,3.02146983995894,0,0,0.0920809889358963,12.3999604017775,3.27764102412091,8.26083814244372,5.41439535488894,2.31046011313244,30.5896409978974,7.30696123266303,1.68882606228601,0,0,1.29549549661284,3.08454505380579,9.7540717515787,16.0540727633553,2.03901018436031,4.15538004464362,5.59686886805446,0,0,5.12900250232778,0.656029291399411,0.325378394664303,2.98818933778395,0.0915694648183434,0,0,0,8.03419649220798,7.54031602678551,8.3186253241908,7.36817638685422,3.1702411671442,9.99008277274945,8.84601832876794,6.13631717395926,16.3818945589997,0,0.384380134730212,0,0,4.64845549297286,0.94443704049192,3.485186350803,0,0.532306030317022,5.21959795245044,5.74505079222152,0.286249773483982,10.7925927114304,4.11293252134344,3.0500831027812,7.16513815671735,4.70732886837312,10.8189104294818,2.35484592059769,4.31693898199955,8.5106479218177,9.66061699234629,1.41527737101321,1.58510321173008,0.842516912477962,27.7951231281066,3.1682753652067,2.11300293513511,11.6024924696788,11.5952454202044,6.78048699721457,1.65409603063837,0.66343897524122,0.876901770507525,9.260408548267,5.9030527684197,3.65238678532867,9.914351939192,11.8312153063541,5.44963138375396,2.84922218938051,3.5667105148125,5.67617702512956,7.59987487071591,1.31717957183961,14.4199806030972,21.6959526551889,0.288666338176536,0.670302275535787,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,8.60846485877811,7.17890078432281,0,0,0,5.49112314896687,0.296964680832639,5.83605333988541,1.9882952955326,1.96937182974718,0,28.6758741154562,0,7.77067154179172,3.59169090190492,0,0,0,0,0,0,0,11.935852082069,0,0,0,1.02044907978036,1.99613798001194,0,0,5.79999660347835,0,0,0,0,4.08246458736556,0,1.77148277162768,1.32656082487949,1.52581736317083,0.774054819518572,0.591095237907095,1.97446857438575,0,0,5.38651809526579,0,0.69169171316418,1.07709173291727,0,8.29403015302991,3.75550132947635,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.5113357896703,0.611030144933625,0,0,0,0.808813595768125,2.40773294189637,0.234264445725339,0,0,0,0.789168805698781,0,0.30607276163049,8.46700167021739,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,4.19344003780872,0,0.0967563312890851,0,0,5.14041787388623,17.8277375916831,2.93774963014692,0,0,1.39283751102933,0,0,4.0556069000477,0,0,0,0,22.1844388901751,0,0,0,0,0,0,0,1.09524303113594,0,0,0.262887354279314,4.74780082162832,3.43740636017525,7.17873024576814,2.39614800598789,2.57535628881943,4.24025769139558,4.97157696401774,0,0,0,0,0,0.196854963029498,0,0,0.817220436669454,0.803765742325096,0.275078873194468,0.415440338029185,0,0,1.64023802976667,0,2.20655980437755,4.98318587282482,0,0,0,5.00286728461357,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.879313402068495,0,2.32709321450791,1.85125642439766,0,0,7.90226853000941,8.33182817028229,1.24271716604159,8.93098839261511,0,0,0,0.544017803369474,1.0027595760908,2.14441903734423,0.983617892129413,0,4.43034089983493,1.58634144372552,1.1267183763585,2.86704597845036,1.66393577305278,2.98062734118641,0,0,0,0,0,0,0,5.22391810104059,3.27198633786114,2.77402930751307,1.51522404220071,1.76097531226803,2.66943366478961,0.228840068396924,1.81477108515887,2.64243240990727,0,1.59296767163702,0,2.94999618064893,0.829412415681711,0.265841714557995,1.04349012362347,0.300515217994437,0,0.813741466409323,0.909243296012797,0.859284456339908,0.464033759878494,1.59238355479446,0,5.15093557774189,4.71449284272287,0,5.20073542099719,46.7482669197338,0,0,0,0,0,10.1904477563121,1.31570429747224,0,0,2.36519416914302,0,0,0,2.21213497842769,0.584580926518165,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.218419276384028,0,0,0.495743057036009,0,1.59002175326709,0,0,0,0.3062454773532,0.642292250964595,0,1.75597244962866,0.82046545696302,1.76450187355203,1.86724581653388,0.645902582527404,0,0,0,0,0,0,0,0,23.6160431016668,0,1.56302802246618,0,0,0,1.41828927698629,3.12431239445539,1.86018116851066,1.52197944465376,0,0,4.96211178389294,2.46219742103469,0.127762427639595,1.60710550763486,0.336283722218824,7.89055285507621,4.55324382702595,2.12885688390333,0,0,1.90315252335129,1.24968269769413,0,0,6.35794052089164,0.471346769748006,0,1.82631744101899,0,0,5.57517044577919,0,9.18307260408189,0,2.40513409419076,0,0,0,1.29068207646083,1.53831600949735,0.681707238073262,1.27016115057279,0,0,0,0,0,0,0.647428837187895,5.0304775359561,4.6392577253528,0.485710993059139,0,0,0,0,1.53916723443601,0,3.39566295674957,2.62271472604749,0,5.14811475683202,0,1.57046773691956,1.48523200163543,2.113278637917,0.679708458751268,19.7366227757693,9.79759897198373,0,0,0,0,0.730336388246517,3.66983426723633,0.860037498908708,1.41994405973866,1.01987235286372,0,3.7031878836078,4.46394021800102,4.15958065768276,0.865253124247578,0.504665699340316,1.74824915141913,0,0.407955318967927,1.06886962106224,0.643264296743914,0.752122617877125,2.72803313585662,1.07185652062471,0,0.827463966895162,2.13233981900981,1.66645102024618,0.193766729508018,0.744896571550295,0,2.60953348940476,0.404234377916439,2.17716747896961,1.71116650542641,7.67813404366298,6.52672069073355,4.9899053481902,0,0,0,0,7.03922827210363,3.54500188130313,0.813792356631477,2.66302709674205,4.42802345900258,0 | |||
|short_description=p5@BCL3 | |||
}} |
Revision as of 23:47, 20 January 2014
Short description: | p5@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000474300_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.96e-17 | 55 |
muscle precursor cell | 1.59e-16 | 58 |
myoblast | 1.59e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.59e-16 | 58 |
electrically responsive cell | 3.18e-14 | 61 |
electrically active cell | 3.18e-14 | 61 |
mesodermal cell | 7.25e-12 | 121 |
smooth muscle cell | 5.24e-10 | 43 |
smooth muscle myoblast | 5.24e-10 | 43 |
cell of skeletal muscle | 3.76e-07 | 9 |