FFCP PHASE1:Hg19::chr1:117910047..117910131,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6822 | |||
|TSSclassifier=strong | |||
|UniProt=O60476,A6NLR2,Q5T9E2 | |||
|association_with_transcript=0bp_to_ENST00000356554,ENST00000369450,NM_006699,uc001ehd.1,uc009whg.1_5end | |||
|description=CAGE_peak_1_at_MAN1A2_5end | |||
|id=chr1:117910047..117910131,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.23e-12!52;CL:0000542!1.45e-12!53;CL:0000051!1.45e-12!53;CL:0000791!8.94e-09!18;CL:0000789!8.94e-09!18;CL:0002420!8.94e-09!18;CL:0002419!8.94e-09!18;CL:0000790!8.94e-09!18;CL:0000084!1.09e-07!25;CL:0000827!1.09e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.99e-09;18!CL:0000789;9.99e-09;18!CL:0002419;9.99e-09;18!CL:0000084;1.29e-07;25!CL:0000542;2.05e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.23e-12,52;CL:0000542,1.45e-12,53;CL:0000051,1.45e-12,53;CL:0000791,8.94e-09,18;CL:0000789,8.94e-09,18;CL:0002420,8.94e-09,18;CL:0002419,8.94e-09,18;CL:0000790,8.94e-09,18;CL:0000084,1.09e-07,25;CL:0000827,1.09e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;9.99e-09;18!CL:0000051;2.05e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-17!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.48e-16,114 | |||
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| |||
|short_description=p1@MAN1A2 | |||
}} |
Revision as of 20:22, 10 January 2014
Short description: | p1@MAN1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAN1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356554, ENST00000369450, NM_006699, uc001ehd.1, uc009whg.1_5end |
EntrezGene: | MAN1A2 |
HGNC: | 6822 |
UniProt: | O60476A6NLR2Q5T9E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.23e-12 | 52 |
lymphocyte | 1.45e-12 | 53 |
common lymphoid progenitor | 1.45e-12 | 53 |
mature alpha-beta T cell | 8.94e-09 | 18 |
alpha-beta T cell | 8.94e-09 | 18 |
immature T cell | 8.94e-09 | 18 |
mature T cell | 8.94e-09 | 18 |
immature alpha-beta T cell | 8.94e-09 | 18 |
T cell | 1.09e-07 | 25 |
pro-T cell | 1.09e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.48e-16 | 114 |