FFCP PHASE1:Hg19::chr1:17380510..17380541,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10681 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000466613_5end | |||
|coexpression_cluster_id=C1752 | |||
|description=CAGE_peak_1_at_SDHB_5end | |||
|id=chr1:17380510..17380541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.70e-07!70;UBERON:0003104!6.50e-07!238;UBERON:0009142!6.50e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.49e-08,78;UBERON:0002329,4.19e-07,71;UBERON:0003059,4.19e-07,71;UBERON:0007282,4.19e-07,71;UBERON:0004290,4.19e-07,71;UBERON:0009618,4.19e-07,71;UBERON:0003077,4.66e-07,72;UBERON:0007285,4.66e-07,72;UBERON:0007524,6.14e-07,73 | |||
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|short_description=p1@SDHB | |||
}} |
Revision as of 16:38, 10 January 2014
Short description: | p1@SDHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDHB_5end |
Coexpression cluster: | C1752_left_heart_diaphragm_tongue_skeletal_nonsmall_chronic |
Association with transcript: | 0bp_to_ENST00000466613_5end |
EntrezGene: | SDHB |
HGNC: | 10681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.49e-08 | 78 |
somite | 4.19e-07 | 71 |
presomitic mesoderm | 4.19e-07 | 71 |
presumptive segmental plate | 4.19e-07 | 71 |
dermomyotome | 4.19e-07 | 71 |
trunk paraxial mesoderm | 4.19e-07 | 71 |
paraxial mesoderm | 4.66e-07 | 72 |
presumptive paraxial mesoderm | 4.66e-07 | 72 |
dense mesenchyme tissue | 6.14e-07 | 73 |