FFCP PHASE1:Hg19::chr1:59361566..59361570,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:59361566..59361570,- | |||
|id=chr1:59361566..59361570,- | |||
|ontology_enrichment_celltype=CL:0000144!3.60e-08!625;CL:0002541!1.82e-07!3;CL:0002371!4.83e-07!591;CL:0000048!5.01e-07!430;CL:0002057!5.87e-07!42;CL:0000548!8.50e-07!679;CL:0000004!8.50e-07!679;CL:0000255!8.50e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000056;3.35e-35;4!CL:0002536;1.00e-31;2!CL:0000515;1.59e-21;3!CL:0000680;1.90e-20;7!CL:0000228;8.85e-17;1!CL:0002372;8.85e-17;1!CL:0002321;7.00e-10;15!CL:0000349;7.45e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.36e-35,4;CL:0002536,1.17e-31,2;CL:0000228,6.47e-17,1;CL:0002372,6.47e-17,1;CL:0000349,8.00e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000515;3.35e-35;4 | |||
|ontology_enrichment_disease=DOID:2394!3.92e-11!14;DOID:120!1.71e-07!27;DOID:193!8.19e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.63e-12!14;UBERON:0000158!3.63e-12!14;UBERON:0002118!7.25e-11!5;UBERON:0004532!7.25e-11!5;UBERON:0003124!3.55e-08!7;UBERON:0000478!1.04e-07!24;UBERON:0000476!1.82e-07!3;UBERON:0000920!1.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.13e-14;10!UBERON:0000158;2.13e-14;10!UBERON:0000305;8.72e-10;7!UBERON:0001134;2.68e-09;16!UBERON:0002036;2.68e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.03e-10,14;UBERON:0000158,2.03e-10,14;UBERON:0000305,9.11e-10,7;UBERON:0004871,1.17e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.40285509343189,2.11013582582763,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0.575384784644301,0.256160706529101,0.709446689665756,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0.598390972864896,0.852449501065388,0,0,0,2.00998932205395,0.521482918420201,0.65156653411535,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0,0,0,1.20036438433761,0.206105058476878,0,0,0.337552664482532,0.194874010322397,0,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.599837947092342,0,0,0,0,0,2.85273810081437,2.02693829334611,0,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.606255142892519,0,0.907170879989041,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0.797525143673985,0,0.300515217994437,0.761610424337591,0.406870733204662,0.363697318405119,0.107410557042488,1.39210127963548,0.398095888698616,2.80019435264208,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7332336338646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:59361566..59361570,- | |||
}} |
Revision as of 18:43, 10 January 2014
Short description: | p@chr1:59361566..59361570, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:59361566..59361570, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.36e-35 | 4 |
amniotic epithelial cell | 1.17e-31 | 2 |
multinucleate cell | 6.47e-17 | 1 |
myotube | 6.47e-17 | 1 |
extraembryonic cell | 8.00e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.03e-10 | 14 |
membranous layer | 2.03e-10 | 14 |
amnion | 9.11e-10 | 7 |
somatic layer of lateral plate mesoderm | 1.17e-08 | 8 |