FFCP PHASE1:Hg19::chr1:70033553..70033581,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-499bp_to_ENST00000310961_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_LRRC7_5end | |||
|id=chr1:70033553..70033581,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.97e-13;82!UBERON:0010122;5.48e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.10e-48!86;UBERON:0000073!2.40e-47!94;UBERON:0001016!2.40e-47!94;UBERON:0001049!9.95e-47!57;UBERON:0005068!9.95e-47!57;UBERON:0006241!9.95e-47!57;UBERON:0007135!9.95e-47!57;UBERON:0001017!1.03e-46!82;UBERON:0000955!1.96e-41!69;UBERON:0006238!1.96e-41!69;UBERON:0002780!5.47e-41!41;UBERON:0001890!5.47e-41!41;UBERON:0006240!5.47e-41!41;UBERON:0003075!1.98e-40!86;UBERON:0007284!1.98e-40!86;UBERON:0003080!1.17e-39!42;UBERON:0001893!5.38e-39!34;UBERON:0002616!1.15e-38!59;UBERON:0002020!1.24e-38!34;UBERON:0003528!1.24e-38!34;UBERON:0002791!8.48e-38!33;UBERON:0002346!1.25e-37!90;UBERON:0001869!5.89e-37!32;UBERON:0003056!2.93e-31!61;UBERON:0007023!2.31e-30!115;UBERON:0002619!8.34e-29!22;UBERON:0000956!2.90e-28!25;UBERON:0000203!2.90e-28!25;UBERON:0001950!2.39e-26!20;UBERON:0000153!3.78e-26!129;UBERON:0007811!3.78e-26!129;UBERON:0004121!2.32e-25!169;UBERON:0000033!1.04e-24!123;UBERON:0000924!3.56e-24!173;UBERON:0006601!3.56e-24!173;UBERON:0002420!2.27e-12!9;UBERON:0007245!2.27e-12!9;UBERON:0010009!2.27e-12!9;UBERON:0010011!2.27e-12!9;UBERON:0000454!2.27e-12!9;UBERON:0002308!1.07e-11!9;UBERON:0000125!1.07e-11!9;UBERON:0001871!4.38e-11!7;UBERON:0000064!2.34e-10!219;UBERON:0009663!7.07e-10!7;UBERON:0000025!2.09e-09!194;UBERON:0000200!1.27e-08!6;UBERON:0003076!1.31e-08!15;UBERON:0003057!1.31e-08!15;UBERON:0000349!8.49e-08!5;UBERON:0001872!1.64e-07!5;UBERON:0002021!2.12e-07!5;UBERON:0002298!8.31e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.36e-62;32!UBERON:0001893;1.49e-62;34!UBERON:0002791;2.51e-62;32!UBERON:0003528;3.00e-62;34!UBERON:0002020;3.00e-62;34!UBERON:0002619;2.87e-59;22!UBERON:0001950;4.49e-54;20!UBERON:0002780;1.42e-52;41!UBERON:0001890;1.42e-52;41!UBERON:0000956;1.28e-51;25!UBERON:0000203;1.28e-51;25!UBERON:0000073;8.37e-37;53!UBERON:0002616;8.37e-37;53!UBERON:0000955;5.29e-26;68!UBERON:0001017;7.09e-26;75!UBERON:0002420;1.97e-24;9!UBERON:0007245;1.97e-24;9!UBERON:0010009;1.97e-24;9!UBERON:0010011;1.97e-24;9!UBERON:0000454;1.97e-24;9!UBERON:0000125;4.32e-23;9!UBERON:0002308;4.32e-23;9!UBERON:0001016;7.55e-22;83!UBERON:0009663;3.69e-19;7!UBERON:0001871;3.95e-19;6!UBERON:0000200;1.91e-16;6!UBERON:0000349;1.14e-14;5!UBERON:0001872;4.16e-14;5!UBERON:0002021;6.91e-14;5!UBERON:0000369;2.59e-12;4!UBERON:0002435;2.59e-12;4!UBERON:0000204;2.59e-12;4!UBERON:0011216;1.03e-09;132!UBERON:0005383;1.07e-09;3!UBERON:0005382;1.07e-09;3!UBERON:0001870;3.45e-09;3!UBERON:0007023;8.68e-09;114!UBERON:0000988;1.20e-07;3!UBERON:0001873;5.48e-07;2!UBERON:0001876;5.79e-07;2!UBERON:0002771;9.45e-07;2!UBERON:0001954;9.45e-07;2!UBERON:0003022;9.45e-07;2!UBERON:0002421;9.45e-07;2!UBERON:0002600;9.45e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,3.71e-74,34;UBERON:0003528,2.04e-73,34;UBERON:0002020,2.04e-73,34;UBERON:0002780,6.29e-73,41;UBERON:0001890,6.29e-73,41;UBERON:0003080,6.29e-73,41;UBERON:0006240,6.29e-73,41;UBERON:0001049,2.24e-70,56;UBERON:0005068,2.24e-70,56;UBERON:0006241,2.24e-70,56;UBERON:0007135,2.24e-70,56;UBERON:0001869,7.97e-70,32;UBERON:0002791,2.54e-69,32;UBERON:0000073,1.19e-67,53;UBERON:0002616,1.19e-67,53;UBERON:0001017,5.60e-67,81;UBERON:0001016,1.17e-61,89;UBERON:0002619,3.37e-59,22;UBERON:0000955,7.81e-59,68;UBERON:0006238,7.81e-59,68;UBERON:0001950,5.63e-54,20;UBERON:0000956,1.48e-51,25;UBERON:0000203,1.48e-51,25;UBERON:0003056,1.03e-48,61;UBERON:0003075,6.09e-47,82;UBERON:0007284,6.09e-47,82;UBERON:0002346,3.11e-44,86;UBERON:0010371,1.61e-36,104;UBERON:0004121,3.34e-30,171;UBERON:0000924,3.34e-30,171;UBERON:0006601,3.34e-30,171;UBERON:0010314,2.15e-29,132;UBERON:0007023,6.56e-26,114;UBERON:0011216,1.22e-24,223;UBERON:0002420,2.49e-24,9;UBERON:0007245,2.49e-24,9;UBERON:0010009,2.49e-24,9;UBERON:0010011,2.49e-24,9;UBERON:0000454,2.49e-24,9;UBERON:0000125,6.52e-23,9;UBERON:0002308,6.52e-23,9;UBERON:0001871,4.53e-19,6;UBERON:0009663,4.53e-19,7;UBERON:0000200,1.97e-16,6;UBERON:0000349,1.07e-14,5;UBERON:0000025,1.30e-14,192;UBERON:0001872,4.28e-14,5;UBERON:0002021,7.31e-14,5;UBERON:0000369,2.56e-12,4;UBERON:0002435,2.56e-12,4;UBERON:0000204,2.56e-12,4;UBERON:0010082,2.56e-12,4;UBERON:0004111,3.28e-10,240;UBERON:0005383,1.08e-09,3;UBERON:0005382,1.08e-09,3;UBERON:0001870,3.55e-09,3;UBERON:0000988,1.30e-07,3;UBERON:0000483,2.26e-07,306;UBERON:0000119,3.38e-07,309;UBERON:0001873,5.48e-07,2;UBERON:0010122,5.48e-07,2;UBERON:0001876,5.97e-07,2;UBERON:0001954,8.83e-07,2;UBERON:0003022,8.83e-07,2;UBERON:0002421,8.83e-07,2;UBERON:0002600,8.83e-07,2;UBERON:0002771,9.86e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,1.7703879310245,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.802622484269139,4.18142095219907,0,0,0,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,1.15859523106239,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.982343066232845,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,5.20559415430487,1.54657762555539,5.36052049069916,3.18969375826582,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73123055571734,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92349595790849,1.08182271390393,3.99686361597384,2.81974010175699,0,0,0.121360521749513,0,0,0,0,0,21.8712482508586,11.534892145662,0,0,0,0,0.276283915531148,0,0.511343412510774,0,0.311039587661807,0,0,0,0,0,0,11.6319929531426,4.36010061360701,27.9459317201672,0,0,0,0,0,0,0,0,0.347249989866585,16.8290863304629,18.4512551096874,0,0.110579259931225,0,5.70402032600329,1.0893846351899,0,0.461701551022782,2.16489906109302,0,0,0,0,0,0,0,0,0.498635045700469,1.1279783030859,0.19606253431774,0.167821586975843,0,0,0,0,0.989471500037586,0,0,0.265372693510018,0.611030144933625,0,0.123563938946503,0,3.37005664903385,0.802577647298789,7.49646226321085,0,0,0,0,1.20990716048664,27.5465485467441,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0.441280633457501,0.90392296312213,0.137041924646751,0,8.86351143382302,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0.209205692624666,0.203996435272644,0,12.6088260629056,4.24406674565178,0,1.71906176567983,0,0.558564802544508,0.458320848023367,0,0,0,0,0.268733889946905,0,0,0,0,0,0.196854963029498,0,9.54275627771164,8.85322139725241,0,0,0,0,0,9.3554317253358,0,0,0.734364233889974,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,1.42211251997706,1.05786081394152,0,0,0,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0,0,6.2024772597689,8.17575974843153,9.13893794157449,0.573409195690071,0.998361463831671,1.80079568530012,0.691743174681154,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,3.70435958918134,0.244736704506468,0.895444205407437,0.308801447160972,0,0.176689145945881,0.578742114812744,0,0.256241518587947,0,0,9.26331522216596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.471797825567689,1.20130602011215,0,0,0,0,0,0,0.80057074828547,0,0,11.9466358679415,4.25089728976755,5.42755120794314,7.79442184114869,31.5089620277148,5.04847942988791,7.9123066359607,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,6.75375846183946,7.02970288752463,8.68084545304973,6.21474939900287,34.4594129681478,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.342976018874837,1.4953341254903,4.47254860227374,0,0,0,22.4675293579883,0,4.56579360254748,3.0229862770607,0,0.78624198594322,0,0,1.21700790611806,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,1.94284397223656,0.233939463462106,0,0.118920090777569,0,0,1.81155412280008,0.308696632431779,0.874238242015829,1.41095188908457,0.735444965261716,5.65623713043902,2.35570160537934,0.297046400327086,1.2679671827502,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,1.14671666521161,0,6.4591915681369,22.6902358976996,2.645134202577,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,9.12086383404657,4.13731983447581,0.213233981900981,1.42838658878244,0.0645889098360061,0.124149428591716,2.35476911419288,0.0636471582781649,0.808468755832877,0.217716747896961,1.02669990325584,0,0.0717222053926763,0.665320713092027,0,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p4@LRRC7 | |||
}} |
Revision as of 19:02, 10 January 2014
Short description: | p4@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -499bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data