FFCP PHASE1:Hg19::chr20:20066107..20066120,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15872 | |||
|TSSclassifier=strong | |||
|UniProt=C9JA66 | |||
|association_with_transcript=1bp_to_ENST00000442372_5end | |||
|coexpression_cluster_id=C348 | |||
|description=CAGE_peak_3_at_C20orf26_5end | |||
|id=chr20:20066107..20066120,+ | |||
|ontology_enrichment_celltype=CL:0000148!4.32e-23!10;CL:0000541!4.32e-23!10;CL:0000147!2.41e-16!14;CL:0000710!2.85e-11!20;CL:0002567!7.05e-10!3;CL:0000333!2.13e-08!41;CL:0000075!3.38e-08!27;CL:0002566!4.28e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.06e-61;10!CL:0000147;3.06e-44;14!CL:0002567;4.66e-34;3!CL:0000710;4.03e-31;20!CL:0002566;2.16e-26;1!CL:0000075;3.63e-23;27!CL:0002077;1.01e-18;34!CL:0000149;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.06e-61,10;CL:0000541,1.06e-61,10;CL:0000147,3.06e-44,14;CL:0002567,4.66e-34,3;CL:0000710,4.03e-31,20;CL:0002566,2.16e-26,1;CL:0000075,3.63e-23,27;CL:0002077,1.79e-18,34;CL:0000333,1.12e-14,41;CL:0000133,2.02e-10,59;CL:0000221,1.26e-08,72;CL:0000149,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!4.54e-14!2;DOID:178!7.76e-08!1;DOID:326!7.76e-08!1;DOID:3978!7.76e-08!1;DOID:3394!7.76e-08!1;DOID:5844!7.76e-08!1;DOID:1287!1.86e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1909;8.28e-14;2!DOID:114;1.37e-13;2!DOID:1287;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.28e-14,2;DOID:114,1.37e-13,2;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003127!3.94e-13!2;UBERON:0007023!1.17e-10!115;UBERON:0003978!2.75e-09!3;UBERON:0009751!2.75e-09!3;UBERON:0000946!2.75e-09!3;UBERON:0002523!2.75e-09!3;UBERON:0005983!2.75e-09!3;UBERON:0002165!2.75e-09!3;UBERON:0002062!2.75e-09!3;UBERON:0007280!2.75e-09!3;UBERON:0003126!2.43e-08!7;UBERON:0001005!2.43e-08!7;UBERON:0005418!8.28e-08!1;UBERON:0001389!8.28e-08!1;UBERON:0000026!8.28e-08!1;UBERON:0008784!8.28e-08!1;UBERON:0006058!8.28e-08!1;UBERON:0003663!8.28e-08!1;UBERON:0001383!8.28e-08!1;UBERON:0004256!8.28e-08!1;UBERON:0002529!8.28e-08!1;UBERON:0004708!8.28e-08!1;UBERON:0002101!8.28e-08!1;UBERON:0004709!8.28e-08!1;UBERON:0003661!8.28e-08!1;UBERON:0002471!8.28e-08!1;UBERON:0004357!8.28e-08!1;UBERON:0009872!8.28e-08!1;UBERON:0004347!8.28e-08!1;UBERON:0005420!8.28e-08!1;UBERON:0005732!8.28e-08!1;UBERON:0006057!8.28e-08!1;UBERON:0000978!8.28e-08!1;UBERON:0002103!8.28e-08!1;UBERON:0001665!8.28e-08!1;UBERON:0003823!8.28e-08!1;UBERON:0000154!8.28e-08!1;UBERON:0005733!8.28e-08!1;UBERON:0005730!8.28e-08!1;UBERON:0007029!1.01e-07!1;UBERON:0001736!1.07e-07!1;UBERON:0006298!1.07e-07!1;UBERON:0002146!1.15e-07!1;UBERON:0005623!1.15e-07!1;UBERON:0002135!1.69e-07!1;UBERON:0001301!2.04e-07!1;UBERON:0003103!2.63e-07!69;UBERON:0002372!3.17e-07!1;UBERON:0001961!3.17e-07!1;UBERON:0001744!3.17e-07!1;UBERON:0001735!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8592419451809,4.20187268114105,11.7217447210047,0,0.205654985406647,2.10240140490742,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.798716001995964,2.57535628881943,0.89268582976749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70756400571412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,3.2852098193999,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@C20orf26 | |||
}} |
Revision as of 10:28, 21 January 2014
Short description: | p3@C20orf26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C20orf26_5end |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | 1bp_to_ENST00000442372_5end |
EntrezGene: | C20orf26 |
HGNC: | 15872 |
UniProt: | C9JA66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.06e-61 | 10 |
melanoblast | 1.06e-61 | 10 |
pigment cell | 3.06e-44 | 14 |
light melanocyte | 4.66e-34 | 3 |
neurecto-epithelial cell | 4.03e-31 | 20 |
dark melanocyte | 2.16e-26 | 1 |
columnar/cuboidal epithelial cell | 3.63e-23 | 27 |
ecto-epithelial cell | 1.79e-18 | 34 |
migratory neural crest cell | 1.12e-14 | 41 |
neurectodermal cell | 2.02e-10 | 59 |
ectodermal cell | 1.26e-08 | 72 |
visual pigment cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.28e-14 | 2 |
heart disease | 1.37e-13 | 2 |
cardiovascular system disease | 1.92e-07 | 4 |