FFCP PHASE1:Hg19::chr20:32150291..32150306,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1536 | |||
|TSSclassifier=strong | |||
|UniProt=A2A2D9 | |||
|association_with_transcript=-65bp_to_ENST00000454955_5end | |||
|coexpression_cluster_id=C4024 | |||
|description=CAGE_peak_7_at_CBFA2T2_5end | |||
|id=chr20:32150291..32150306,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.20e-23;5!CL:0000167;1.10e-13;1!CL:0000164;1.10e-13;1!CL:0000502;1.10e-13;1!CL:0000172;1.10e-13;1!CL:0000173;1.10e-13;1!CL:0002321;5.51e-08;15!CL:0002535;9.86e-08;2!CL:0000123;1.20e-07;2!CL:0000242;1.20e-07;2!CL:0000047;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.73e-14,1;CL:0000164,9.73e-14,1;CL:0000502,9.73e-14,1;CL:0000172,9.73e-14,1;CL:0000173,9.73e-14,1;CL:0002351,9.73e-14,1;CL:0002535,9.87e-08,2;CL:0000242,1.20e-07,2;CL:0000333,4.13e-07,41;CL:0000133,6.32e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002351;1.10e-13;1 | |||
|ontology_enrichment_disease=DOID:171!3.36e-11!10;DOID:169!4.60e-09!6;DOID:5409!1.18e-07!4;DOID:4362!9.76e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:169;5.10e-33;6!DOID:4362;2.66e-23;5!DOID:171;5.62e-20;10!DOID:4430;1.10e-13;1!DOID:3095;3.11e-09;22!DOID:2994;3.11e-09;22!DOID:120;1.09e-07;27!DOID:154;1.75e-07;2!DOID:4236;1.75e-07;2!DOID:4468;1.75e-07;2!DOID:193;3.61e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.92e-33,6;DOID:4362,1.76e-23,5;DOID:171,8.35e-20,10;DOID:4430,9.73e-14,1;DOID:3095,3.70e-09,22;DOID:2994,3.70e-09,22;DOID:162,1.24e-08,235;DOID:14566,2.05e-08,239;DOID:120,1.01e-07,27;DOID:0050687,1.80e-07,143;DOID:4468,1.87e-07,2;DOID:154,1.99e-07,2;DOID:4236,1.99e-07,2;DOID:193,3.35e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.68e-18!94;UBERON:0001016!1.68e-18!94;UBERON:0001017!3.46e-17!82;UBERON:0005743!4.22e-16!86;UBERON:0002791!9.07e-14!33;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0001893!2.78e-13!34;UBERON:0007023!1.93e-12!115;UBERON:0000924!5.51e-12!173;UBERON:0006601!5.51e-12!173;UBERON:0001950!6.52e-12!20;UBERON:0000956!2.70e-11!25;UBERON:0000203!2.70e-11!25;UBERON:0002020!3.04e-11!34;UBERON:0003528!3.04e-11!34;UBERON:0002346!3.31e-11!90;UBERON:0002619!1.05e-10!22;UBERON:0004121!1.49e-10!169;UBERON:0002780!1.57e-10!41;UBERON:0001890!1.57e-10!41;UBERON:0006240!1.57e-10!41;UBERON:0000955!2.61e-10!69;UBERON:0006238!2.61e-10!69;UBERON:0003080!3.27e-10!42;UBERON:0001869!3.83e-10!32;UBERON:0002616!4.86e-10!59;UBERON:0003075!1.54e-09!86;UBERON:0007284!1.54e-09!86;UBERON:0000153!1.33e-07!129;UBERON:0007811!1.33e-07!129;UBERON:0003056!3.71e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.20e-23;5!UBERON:0002410;9.20e-23;5!UBERON:0000002;1.56e-19;6!UBERON:0001560;1.56e-19;6!UBERON:0000010;6.12e-13;8!UBERON:0006955;9.86e-08;2!UBERON:0004801;9.86e-08;2!UBERON:0000995;2.94e-07;17!UBERON:0003975;7.01e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.80e-22,5;UBERON:0002410,1.80e-22,5;UBERON:0000002,1.10e-19,6;UBERON:0001560,1.10e-19,6;UBERON:0000010,8.85e-13,8;UBERON:0006955,9.87e-08,2;UBERON:0004801,9.87e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28285671352269,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,1.74962768029953,1.38899995946634,0,0,0,0,0,0,0,1.95193241990045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.221858103073705,0.248385611765534,1.66018361923477,0,0,0,0,0.468334905806882,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27894371303652,1.1860729253635,0,1.63814457288021,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253663240775627,0.546974809018219,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9769708788558,0.397901550322736,0,0.5647304101948,0.109940516745429,6.18947658623362,0.0771741581079447,0,0.470317296361523,0,1.64973582971138,0.196308467114945,0.297046400327086,0,0,0,0.386747327841463,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@CBFA2T2 | |||
}} |
Revision as of 10:49, 21 January 2014
Short description: | p7@CBFA2T2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CBFA2T2_5end |
Coexpression cluster: | C4024_small_argyrophil_merkel_gastrointestinal_cervical_neuroblastoma_smallcell |
Association with transcript: | -65bp_to_ENST00000454955_5end |
EntrezGene: | CBFA2T2 |
HGNC: | 1536 |
UniProt: | A2A2D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.73e-14 | 1 |
enteroendocrine cell | 9.73e-14 | 1 |
type D enteroendocrine cell | 9.73e-14 | 1 |
somatostatin secreting cell | 9.73e-14 | 1 |
pancreatic D cell | 9.73e-14 | 1 |
progenitor cell of endocrine pancreas | 9.73e-14 | 1 |
epithelial cell of cervix | 9.87e-08 | 2 |
Merkel cell | 1.20e-07 | 2 |
migratory neural crest cell | 4.13e-07 | 41 |
neurectodermal cell | 6.32e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.80e-22 | 5 |
autonomic nervous system | 1.80e-22 | 5 |
uterine cervix | 1.10e-19 | 6 |
neck of organ | 1.10e-19 | 6 |
peripheral nervous system | 8.85e-13 | 8 |
uterine epithelium | 9.87e-08 | 2 |
cervix epithelium | 9.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.92e-33 | 6 |
cervical cancer | 1.76e-23 | 5 |
neuroectodermal tumor | 8.35e-20 | 10 |
somatostatinoma | 9.73e-14 | 1 |
germ cell and embryonal cancer | 3.70e-09 | 22 |
germ cell cancer | 3.70e-09 | 22 |
cancer | 1.24e-08 | 235 |
disease of cellular proliferation | 2.05e-08 | 239 |
female reproductive organ cancer | 1.01e-07 | 27 |
cell type cancer | 1.80e-07 | 143 |
clear cell adenocarcinoma | 1.87e-07 | 2 |
mixed cell type cancer | 1.99e-07 | 2 |
carcinosarcoma | 1.99e-07 | 2 |
reproductive organ cancer | 3.35e-07 | 29 |