FFCP PHASE1:Hg19::chr20:49411443..49411474,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14367 | |||
|TSSclassifier=strong | |||
|UniProt=F8WE92,Q8TDM0 | |||
|association_with_transcript=0bp_to_ENST00000262591,ENST00000355583,NM_001010974,NM_017843,NM_198799,uc002xvp.1,uc002xvq.2,uc002xvr.2,uc002xvs.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_BCAS4_5end | |||
|id=chr20:49411443..49411474,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.00e-12;82!UBERON:0006215;1.22e-10;3!UBERON:0010122;2.84e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.76e-09;4!DOID:1612;2.76e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.04e-09,4;DOID:1612,3.04e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.23e-32!69;UBERON:0006238!1.23e-32!69;UBERON:0005743!6.47e-32!86;UBERON:0001017!7.22e-31!82;UBERON:0000073!7.25e-31!94;UBERON:0001016!7.25e-31!94;UBERON:0001049!1.29e-30!57;UBERON:0005068!1.29e-30!57;UBERON:0006241!1.29e-30!57;UBERON:0007135!1.29e-30!57;UBERON:0002346!5.11e-30!90;UBERON:0003075!1.07e-28!86;UBERON:0007284!1.07e-28!86;UBERON:0002616!1.26e-28!59;UBERON:0001893!5.16e-28!34;UBERON:0002020!1.09e-27!34;UBERON:0003528!1.09e-27!34;UBERON:0001869!4.11e-27!32;UBERON:0002791!4.17e-27!33;UBERON:0002780!1.89e-25!41;UBERON:0001890!1.89e-25!41;UBERON:0006240!1.89e-25!41;UBERON:0003080!1.88e-24!42;UBERON:0000153!8.62e-24!129;UBERON:0007811!8.62e-24!129;UBERON:0003056!7.80e-23!61;UBERON:0000033!1.48e-22!123;UBERON:0000956!5.19e-21!25;UBERON:0000203!5.19e-21!25;UBERON:0000924!1.58e-20!173;UBERON:0006601!1.58e-20!173;UBERON:0002619!9.76e-20!22;UBERON:0004121!2.36e-19!169;UBERON:0007023!1.10e-18!115;UBERON:0001950!7.56e-18!20;UBERON:0000064!1.05e-12!219;UBERON:0000475!5.07e-10!365;UBERON:0002420!9.10e-09!9;UBERON:0007245!9.10e-09!9;UBERON:0010009!9.10e-09!9;UBERON:0010011!9.10e-09!9;UBERON:0000454!9.10e-09!9;UBERON:0000025!3.52e-08!194;UBERON:0002308!4.31e-08!9;UBERON:0000125!4.31e-08!9;UBERON:0003076!2.19e-07!15;UBERON:0003057!2.19e-07!15;UBERON:0004733!4.26e-07!12;UBERON:0002028!4.26e-07!12;UBERON:0007277!4.26e-07!12;UBERON:0009663!4.92e-07!7;UBERON:0002680!5.98e-07!9;UBERON:0001895!5.98e-07!9;UBERON:0010092!5.98e-07!9;UBERON:0000483!6.14e-07!309;UBERON:0000200!6.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.69e-72;22!UBERON:0001869;1.70e-72;32!UBERON:0002791;6.74e-68;32!UBERON:0001893;1.71e-65;34!UBERON:0001950;2.78e-65;20!UBERON:0000956;1.88e-63;25!UBERON:0000203;1.88e-63;25!UBERON:0003528;1.33e-62;34!UBERON:0002020;1.33e-62;34!UBERON:0002780;4.78e-48;41!UBERON:0001890;4.78e-48;41!UBERON:0000073;1.94e-35;53!UBERON:0002616;1.94e-35;53!UBERON:0000955;3.76e-29;68!UBERON:0001017;7.30e-25;75!UBERON:0000200;7.41e-22;6!UBERON:0001016;8.73e-20;83!UBERON:0002420;1.27e-19;9!UBERON:0007245;1.27e-19;9!UBERON:0010009;1.27e-19;9!UBERON:0010011;1.27e-19;9!UBERON:0000454;1.27e-19;9!UBERON:0000349;6.18e-19;5!UBERON:0001871;1.22e-18;6!UBERON:0002021;1.51e-18;5!UBERON:0001872;4.30e-18;5!UBERON:0000369;1.54e-15;4!UBERON:0002435;1.54e-15;4!UBERON:0000204;1.54e-15;4!UBERON:0009663;1.74e-13;7!UBERON:0005383;6.14e-12;3!UBERON:0005382;6.14e-12;3!UBERON:0001870;9.70e-12;3!UBERON:0000125;2.08e-10;9!UBERON:0002308;2.08e-10;9!UBERON:0007023;2.06e-09;114!UBERON:0002037;4.07e-09;6!UBERON:0011216;6.12e-09;132!UBERON:0001954;8.37e-09;2!UBERON:0003022;8.37e-09;2!UBERON:0002421;8.37e-09;2!UBERON:0002600;8.37e-09;2!UBERON:0002771;1.64e-08;2!UBERON:0001873;2.84e-08;2!UBERON:0001876;3.06e-08;2!UBERON:0002702;3.06e-08;2!UBERON:0010314;3.76e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.84e-82,32;UBERON:0001893,8.76e-77,34;UBERON:0002791,6.90e-76,32;UBERON:0002619,1.01e-72,22;UBERON:0003528,3.89e-71,34;UBERON:0002020,3.89e-71,34;UBERON:0002780,1.51e-67,41;UBERON:0001890,1.51e-67,41;UBERON:0003080,1.51e-67,41;UBERON:0006240,1.51e-67,41;UBERON:0000073,3.86e-66,53;UBERON:0002616,3.86e-66,53;UBERON:0001950,1.96e-65,20;UBERON:0000956,1.20e-63,25;UBERON:0000203,1.20e-63,25;UBERON:0001049,3.28e-62,56;UBERON:0005068,3.28e-62,56;UBERON:0006241,3.28e-62,56;UBERON:0007135,3.28e-62,56;UBERON:0000955,1.74e-59,68;UBERON:0006238,1.74e-59,68;UBERON:0001017,6.61e-55,81;UBERON:0001016,2.45e-51,89;UBERON:0003056,2.15e-46,61;UBERON:0002346,1.57e-45,86;UBERON:0003075,2.30e-45,82;UBERON:0007284,2.30e-45,82;UBERON:0010371,3.20e-36,104;UBERON:0010314,1.86e-30,132;UBERON:0004121,1.22e-28,171;UBERON:0000924,1.22e-28,171;UBERON:0006601,1.22e-28,171;UBERON:0007023,5.49e-27,114;UBERON:0011216,2.97e-22,223;UBERON:0000200,5.88e-22,6;UBERON:0002420,7.90e-20,9;UBERON:0007245,7.90e-20,9;UBERON:0010009,7.90e-20,9;UBERON:0010011,7.90e-20,9;UBERON:0000454,7.90e-20,9;UBERON:0000349,4.70e-19,5;UBERON:0001871,8.87e-19,6;UBERON:0002021,1.82e-18,5;UBERON:0001872,3.35e-18,5;UBERON:0000025,7.82e-17,192;UBERON:0000369,1.05e-15,4;UBERON:0002435,1.05e-15,4;UBERON:0000204,1.05e-15,4;UBERON:0010082,1.05e-15,4;UBERON:0009663,1.23e-13,7;UBERON:0004111,1.27e-12,240;UBERON:0005383,4.11e-12,3;UBERON:0005382,4.11e-12,3;UBERON:0001870,1.06e-11,3;UBERON:0000125,1.60e-10,9;UBERON:0002308,1.60e-10,9;UBERON:0002037,4.65e-09,6;UBERON:0006215,4.65e-09,6;UBERON:0001954,7.07e-09,2;UBERON:0003022,7.07e-09,2;UBERON:0002421,7.07e-09,2;UBERON:0002600,7.07e-09,2;UBERON:0000483,1.04e-08,306;UBERON:0000119,1.54e-08,309;UBERON:0002771,1.55e-08,2;UBERON:0001873,1.94e-08,2;UBERON:0010122,1.94e-08,2;UBERON:0001876,2.70e-08,2;UBERON:0002702,2.80e-08,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,1.25381888591235,0.572471974262113,0.273748850145768,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0.590129310341499,0.393010762749165,0,0,0.651844533267181,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0.802622484269139,1.04535523804977,0,0.766440987203842,0,0,0,0,0,0.602300476311091,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0.670700859703636,0.255725123687061,0,0,0,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.785874452986276,0.364295288292542,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,7.90204397959275,6.00940313466411,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0,1.50764638800914,0,0,0,0,0,0,0,0.831883446123229,0.178428988797162,0,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.385076685522074,1.56869953835371,0,0.316654886678627,1.13733384070897,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30584991324076,0.111443384277478,0,0.71623345421307,0.296964680832639,0,3.97659059106519,2.39138007897872,0,0,0,0,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,1.93866549219044,2.50473865036998,15.9691038400955,2.08342208868187,0,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0,0.347249989866585,1.77148277162768,5.78862905401958,1.52581736317083,1.10579259931225,1.47773809476774,4.16832254592548,0.21787692703798,0,0.538651809526579,0.113942055847001,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.247127877893006,0,0.404406797884062,0,3.04543779442941,0.364909578431332,0.782658475728359,0.242780379534093,0,0,3.97894590119637,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.520679215005393,0.195984794828755,0.0870592065804026,0.34945333648406,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,4.11520173713212,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0.101998217636322,0.577901179803038,4.80336230967832,0.410716136675979,1.27746588066972,0.429765441419957,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,5.56660782866512,4.90332262001672,0,0,0,0,0,3.46272472950741,0.335434687599266,0.0788057072991982,0.0524545881349981,0.105600336519406,0.717149357331379,0.191915197319445,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0.226624183040251,0,0,0.904980694530854,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,2.65820453990096,5.49118192058834,3.254964198369,0,0.443716206147409,0.434674820589684,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,2.62691028688288,0.194860308839388,0,0,0,0.245772908753719,0.211312123358627,0.19998739585493,0,0,0,0,0.279759015438889,0,0.76736622782191,0,1.10086159299127,0.218419276384028,0,0.425149840203366,0.743614585554013,0,0.3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| |||
|short_description=p3@BCAS4 | |||
}} |
Revision as of 12:05, 21 January 2014
Short description: | p3@BCAS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCAS4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000262591, ENST00000355583, NM_001010974, NM_017843, NM_198799, uc002xvp.1, uc002xvq.2, uc002xvr.2, uc002xvs.2_5end |
EntrezGene: | BCAS4 |
HGNC: | 14367 |
UniProt: | F8WE92Q8TDM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.04e-09 | 4 |
breast cancer | 3.04e-09 | 4 |