FFCP PHASE1:Hg19::chr2:178129358..178129403,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7782 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000462023_5end | |||
|coexpression_cluster_id=C1210 | |||
|description=CAGE_peak_5_at_NFE2L2_5end | |||
|id=chr2:178129358..178129403,- | |||
|ontology_enrichment_celltype=CL:0000766!3.40e-29!76;CL:0000557!2.85e-27!71;CL:0002009!5.67e-25!65;CL:0000839!6.60e-25!70;CL:0000738!1.52e-24!140;CL:0002194!6.52e-24!63;CL:0000576!6.52e-24!63;CL:0000040!6.52e-24!63;CL:0000559!6.52e-24!63;CL:0002057!4.13e-20!42;CL:0002031!2.34e-19!124;CL:0000860!5.69e-19!45;CL:0002087!9.47e-18!119;CL:0000763!3.67e-16!112;CL:0000049!3.67e-16!112;CL:0000037!1.04e-14!172;CL:0000566!1.04e-14!172;CL:0002032!4.58e-14!165;CL:0000837!4.58e-14!165;CL:0000988!3.45e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-16;33!CL:0002057;1.91e-16;33!CL:0000473;4.48e-16;39!CL:0000234;4.48e-16;39!CL:0000576;2.04e-13;48!CL:0000766;6.85e-13;69!CL:0000738;9.74e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.30e-30,72;CL:0000557,3.60e-28,67;CL:0002009,7.15e-26,61;CL:0000839,1.03e-25,66;CL:0002194,8.52e-25,59;CL:0000576,8.52e-25,59;CL:0000040,8.52e-25,59;CL:0000559,8.52e-25,59;CL:0000738,1.15e-24,136;CL:0000473,4.38e-23,48;CL:0000234,4.38e-23,48;CL:0000860,3.46e-20,42;CL:0002057,3.46e-20,42;CL:0002031,2.02e-19,120;CL:0002087,8.44e-18,115;CL:0000763,5.92e-16,108;CL:0000049,5.92e-16,108;CL:0000037,2.41e-14,168;CL:0002032,1.08e-13,161;CL:0000837,1.08e-13,161;CL:0000988,2.43e-13,177;CL:0000134,8.81e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;7.14e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-23!102;UBERON:0003061!1.00e-23!102;UBERON:0002371!1.95e-22!80;UBERON:0001474!1.87e-21!86;UBERON:0004765!2.86e-19!101;UBERON:0001434!2.86e-19!101;UBERON:0002193!1.00e-18!112;UBERON:0002405!2.05e-16!115;UBERON:0002204!3.29e-08!167;UBERON:0000926!4.04e-08!448;UBERON:0004120!4.04e-08!448;UBERON:0006603!4.04e-08!448;UBERON:0001007!5.70e-07!155;UBERON:0001555!5.70e-07!155;UBERON:0007026!5.70e-07!155;UBERON:0004119!6.48e-07!169;UBERON:0000925!6.48e-07!169;UBERON:0006595!6.48e-07!169;UBERON:0000161!7.99e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.82e-24,98;UBERON:0003061,3.82e-24,98;UBERON:0002371,5.27e-23,76;UBERON:0001474,6.29e-22,82;UBERON:0004765,1.40e-21,90;UBERON:0001434,3.76e-19,100;UBERON:0002193,5.27e-19,108;UBERON:0002405,1.13e-17,93;UBERON:0002204,2.83e-08,167;UBERON:0004119,5.03e-08,160;UBERON:0000925,5.03e-08,160;UBERON:0006595,5.03e-08,160;UBERON:0001007,5.53e-08,145;UBERON:0001555,5.53e-08,145;UBERON:0007026,5.53e-08,145;UBERON:0000161,5.11e-07,36 | |||
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| |||
|short_description=p5@NFE2L2 | |||
}} |
Revision as of 06:48, 21 January 2014
Short description: | p5@NFE2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NFE2L2_5end |
Coexpression cluster: | C1210_CD14_Mast_immature_Eosinophils_Basophils_Neutrophils_CD34 |
Association with transcript: | 0bp_to_ENST00000462023_5end |
EntrezGene: | NFE2L2 |
HGNC: | 7782 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.30e-30 | 72 |
granulocyte monocyte progenitor cell | 3.60e-28 | 67 |
macrophage dendritic cell progenitor | 7.15e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-25 | 66 |
monopoietic cell | 8.52e-25 | 59 |
monocyte | 8.52e-25 | 59 |
monoblast | 8.52e-25 | 59 |
promonocyte | 8.52e-25 | 59 |
leukocyte | 1.15e-24 | 136 |
defensive cell | 4.38e-23 | 48 |
phagocyte | 4.38e-23 | 48 |
classical monocyte | 3.46e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-20 | 42 |
hematopoietic lineage restricted progenitor cell | 2.02e-19 | 120 |
nongranular leukocyte | 8.44e-18 | 115 |
myeloid cell | 5.92e-16 | 108 |
common myeloid progenitor | 5.92e-16 | 108 |
hematopoietic stem cell | 2.41e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-13 | 161 |
hematopoietic cell | 2.43e-13 | 177 |
mesenchymal cell | 8.81e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.82e-24 | 98 |
blood island | 3.82e-24 | 98 |
bone marrow | 5.27e-23 | 76 |
bone element | 6.29e-22 | 82 |
skeletal element | 1.40e-21 | 90 |
skeletal system | 3.76e-19 | 100 |
hemolymphoid system | 5.27e-19 | 108 |
immune system | 1.13e-17 | 93 |
musculoskeletal system | 2.83e-08 | 167 |
endoderm-derived structure | 5.03e-08 | 160 |
endoderm | 5.03e-08 | 160 |
presumptive endoderm | 5.03e-08 | 160 |
digestive system | 5.53e-08 | 145 |
digestive tract | 5.53e-08 | 145 |
primitive gut | 5.53e-08 | 145 |
orifice | 5.11e-07 | 36 |