FFCP PHASE1:Mm9::chr10:117147129..117147143,-: Difference between revisions
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{{FFCP|EntrezGene=17246|HGNC=|MCL_coexpression_id=2520|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137102_5end|description=CAGE_peak_7_at_Mdm2_5end|id=chr10:117147129..117147143,-|ontology_enrichment_celltype=CL:0000144!1.86e-07!121;CL:0000012!1.86e-07!121;CL:0000355!2.20e-07!9|ontology_enrichment_celltype_v019_2=CL:0000034,1.11e-14,97;CL:0000355,1.39e-12,9;CL:0000723,7.46e-12,91;CL:0000048,7.46e-12,91;CL:0000107,2.85e-09,9;CL:0000222,4.45e-09,7;CL:0000680,3.56e-08,6;CL:0000187,3.56e-08,6;CL:0000056,3.56e-08,6;CL:0002321,2.86e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,4.22e-07,6|ontology_enrichment_uberon=UBERON:0001134!2.20e-07!9;UBERON:0002036!2.20e-07!9;UBERON:0002385!2.20e-07!9;UBERON:0000486!2.20e-07!9;UBERON:0001015!2.20e-07!9;UBERON:0004290!2.20e-07!9;UBERON:0003082!2.20e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.39e-12,9;UBERON:0002036,1.39e-12,9;UBERON:0002385,1.39e-12,9;UBERON:0000486,1.39e-12,9;UBERON:0007503,1.39e-12,9;UBERON:0001015,1.39e-12,9;UBERON:0002329,1.39e-12,9;UBERON:0003082,1.39e-12,9;UBERON:0003059,1.39e-12,9;UBERON:0007282,1.39e-12,9;UBERON:0004290,1.39e-12,9;UBERON:0009618,1.39e-12,9;UBERON:0000010,4.37e-12,11;UBERON:0000383,3.92e-11,10;UBERON:0007524,5.99e-10,11;UBERON:0003077,5.99e-10,11;UBERON:0007285,5.99e-10,11;UBERON:0002410,2.85e-09,9;UBERON:0002204,6.14e-09,32|phase1_expression=0,0.697950815278722,1.36499771816861,1.20985684522732,2.00358291978539,0,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.297872853602656,0.522399578277871,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,3.17515336729816,1.84519436275371,0,0,0,0,3.76678467663217,2.3440060335714,5.23523743973798,2.94115744015507,6.14740936462601,3.88408282424923,10.3235390739973,8.71841608487825,5.68994931701213,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0.336093799142464,4.63066984864705,0.85960031981627,7.73508138416164,0,0,0,1.69422266034566,1.77858959222228,2.2497492932035,4.94433181283487,1.4209602298922,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,5.2251073399897,2.34271836331035,1.15945795480671,0,4.75979933595425,2.69851595818909,0.649776417447669,0.448026887097336,0,1.87473354835864,0.779358013808606,1.06001872353102,0,2.56652954828636,5.09610479413291,0,0.865964164044856,0.253359865475099,2.52762222507392,0.5709193985953,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.879666139307728,0.494389935468748,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,1.31796636956512,0,1.27070227073065,0.149790639404823,0,0,0,0,0.20778804455956,0.486723789203273,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,2.05878325691772,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0.324275238183423,0.292399974850665,0.219550115291051,0,0.420579897128254,0,2.64335026387038,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.864552199498777,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0.889357881261447,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0,1.43768206527355,0,0.624075346229121,1.26289438973556,0.538192240565737,0.964887042726734,0,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0.518054945597687,0.144649058581512,3.01582567878545,8.15858525728064,0,0.275936746304732,0.160550589987792,0.35163505977661,0.163934945376675,0,1.89304931649754,1.17131623288992,0.215423397732799,1.91175038362042,1.33679204449436,1.41538265394416,2.83367491172426,1.75353514746787,1.58115111178609,0,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,3.98941903708308,1.0591603543191,2.20528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.656563598980245,0.582961673259701,0,0.170870880797853,0.412773735926445,0,0.376736914009382,0,0.228778173206523,0.679913719975421,1.25956307091292,0.552799895217695,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,2.88581739386284,3.22969883794113,4.86865387455827,0,1.87682475451182,0,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843|short_description=p7@Mdm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17246 | |||
|HGNC= | |||
|MCL_coexpression_id=2520 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137102_5end | |||
|cluster_id=chr10:117147129..117147143,- | |||
|description=CAGE_peak_7_at_Mdm2_5end | |||
|id=chr10:117147129..117147143,- | |||
|ontology_enrichment_celltype=CL:0000144!1.86e-07!121;CL:0000012!1.86e-07!121;CL:0000355!2.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.11e-14,97;CL:0000355,1.39e-12,9;CL:0000723,7.46e-12,91;CL:0000048,7.46e-12,91;CL:0000107,2.85e-09,9;CL:0000222,4.45e-09,7;CL:0000680,3.56e-08,6;CL:0000187,3.56e-08,6;CL:0000056,3.56e-08,6;CL:0002321,2.86e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,4.22e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.20e-07!9;UBERON:0002036!2.20e-07!9;UBERON:0002385!2.20e-07!9;UBERON:0000486!2.20e-07!9;UBERON:0001015!2.20e-07!9;UBERON:0004290!2.20e-07!9;UBERON:0003082!2.20e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.39e-12,9;UBERON:0002036,1.39e-12,9;UBERON:0002385,1.39e-12,9;UBERON:0000486,1.39e-12,9;UBERON:0007503,1.39e-12,9;UBERON:0001015,1.39e-12,9;UBERON:0002329,1.39e-12,9;UBERON:0003082,1.39e-12,9;UBERON:0003059,1.39e-12,9;UBERON:0007282,1.39e-12,9;UBERON:0004290,1.39e-12,9;UBERON:0009618,1.39e-12,9;UBERON:0000010,4.37e-12,11;UBERON:0000383,3.92e-11,10;UBERON:0007524,5.99e-10,11;UBERON:0003077,5.99e-10,11;UBERON:0007285,5.99e-10,11;UBERON:0002410,2.85e-09,9;UBERON:0002204,6.14e-09,32 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,1.20985684522732,2.00358291978539,0,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.297872853602656,0.522399578277871,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,3.17515336729816,1.84519436275371,0,0,0,0,3.76678467663217,2.3440060335714,5.23523743973798,2.94115744015507,6.14740936462601,3.88408282424923,10.3235390739973,8.71841608487825,5.68994931701213,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0.336093799142464,4.63066984864705,0.85960031981627,7.73508138416164,0,0,0,1.69422266034566,1.77858959222228,2.2497492932035,4.94433181283487,1.4209602298922,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,5.2251073399897,2.34271836331035,1.15945795480671,0,4.75979933595425,2.69851595818909,0.649776417447669,0.448026887097336,0,1.87473354835864,0.779358013808606,1.06001872353102,0,2.56652954828636,5.09610479413291,0,0.865964164044856,0.253359865475099,2.52762222507392,0.5709193985953,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.879666139307728,0.494389935468748,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,1.31796636956512,0,1.27070227073065,0.149790639404823,0,0,0,0,0.20778804455956,0.486723789203273,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,2.05878325691772,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0.324275238183423,0.292399974850665,0.219550115291051,0,0.420579897128254,0,2.64335026387038,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.864552199498777,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0.889357881261447,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0,1.43768206527355,0,0.624075346229121,1.26289438973556,0.538192240565737,0.964887042726734,0,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0.518054945597687,0.144649058581512,3.01582567878545,8.15858525728064,0,0.275936746304732,0.160550589987792,0.35163505977661,0.163934945376675,0,1.89304931649754,1.17131623288992,0.215423397732799,1.91175038362042,1.33679204449436,1.41538265394416,2.83367491172426,1.75353514746787,1.58115111178609,0,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,3.98941903708308,1.0591603543191,2.20528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.656563598980245,0.582961673259701,0,0.170870880797853,0.412773735926445,0,0.376736914009382,0,0.228778173206523,0.679913719975421,1.25956307091292,0.552799895217695,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,2.88581739386284,3.22969883794113,4.86865387455827,0,1.87682475451182,0,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p7@Mdm2 | |||
}} |
Revision as of 22:34, 3 August 2015
Short description: | p7@Mdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Mdm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2520 |
Association with transcript: | 0bp_to_ENSMUST00000137102_5end |
EntrezGene: | 17246 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.11e-14 | 97 |
multi-potent skeletal muscle stem cell | 1.39e-12 | 9 |
somatic stem cell | 7.46e-12 | 91 |
multi fate stem cell | 7.46e-12 | 91 |
autonomic neuron | 2.85e-09 | 9 |
mesodermal cell | 4.45e-09 | 7 |
muscle precursor cell | 3.56e-08 | 6 |
muscle cell | 3.56e-08 | 6 |
myoblast | 3.56e-08 | 6 |
embryonic cell | 2.86e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.39e-12 | 9 |
striated muscle tissue | 1.39e-12 | 9 |
muscle tissue | 1.39e-12 | 9 |
multilaminar epithelium | 1.39e-12 | 9 |
epithelial vesicle | 1.39e-12 | 9 |
musculature | 1.39e-12 | 9 |
somite | 1.39e-12 | 9 |
myotome | 1.39e-12 | 9 |
presomitic mesoderm | 1.39e-12 | 9 |
presumptive segmental plate | 1.39e-12 | 9 |
dermomyotome | 1.39e-12 | 9 |
trunk paraxial mesoderm | 1.39e-12 | 9 |
peripheral nervous system | 4.37e-12 | 11 |
musculature of body | 3.92e-11 | 10 |
dense mesenchyme tissue | 5.99e-10 | 11 |
paraxial mesoderm | 5.99e-10 | 11 |
presumptive paraxial mesoderm | 5.99e-10 | 11 |
autonomic nervous system | 2.85e-09 | 9 |
musculoskeletal system | 6.14e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 4.22e-07 | 6 |