FFCP PHASE1:Mm9::chr10:126578226..126578238,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=21|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126578226..126578238,+|id=chr10:126578226..126578238,+|ontology_enrichment_celltype=CL:0000084!2.12e-40!11;CL:0000827!2.12e-40!11;CL:0000791!2.38e-39!9;CL:0000789!2.38e-39!9;CL:0002420!2.38e-39!9;CL:0002419!2.38e-39!9;CL:0000790!2.38e-39!9;CL:0000838!5.85e-37!12;CL:0000542!4.78e-34!13;CL:0000051!4.78e-34!13;CL:0000624!8.14e-34!8;CL:0002031!8.64e-31!25;CL:0000738!8.15e-26!17;CL:0002087!8.15e-26!17;CL:0000988!9.71e-24!32;CL:0002032!9.71e-24!32;CL:0000037!9.71e-24!32;CL:0000566!9.71e-24!32;CL:0000837!9.71e-24!32;CL:0000893!4.56e-23!6;CL:0002489!4.56e-23!6;CL:0000898!4.56e-23!6;CL:0000809!4.56e-23!6;CL:0000810!4.56e-23!6;CL:0000895!4.56e-23!6;CL:0000808!4.56e-23!6;CL:0000894!4.56e-23!6;CL:0000806!4.56e-23!6;CL:0000807!4.56e-23!6;CL:0000805!4.56e-23!6;CL:0002425!4.56e-23!6;CL:0002436!4.56e-23!6;CL:0002427!4.56e-23!6;CL:0002428!4.56e-23!6;CL:0002429!4.56e-23!6;CL:0002433!4.56e-23!6;CL:0002431!4.56e-23!6;CL:0002432!4.56e-23!6;CL:0002320!4.72e-16!46;CL:0000134!4.72e-16!46;CL:0000219!1.93e-13!54;CL:0000063!1.06e-10!66;CL:0000553!6.57e-09!6;CL:0000556!6.57e-09!6;CL:0000034!4.83e-08!97;CL:0000723!2.67e-07!91;CL:0000048!2.67e-07!91;CL:0000625!3.14e-07!1;CL:0000815!4.10e-07!1;CL:0000792!4.10e-07!1|ontology_enrichment_celltype_v019_2=CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000624,3.49e-25,8;CL:0000625,5.07e-23,1;CL:0000815,1.39e-22,1;CL:0000792,1.39e-22,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.72e-16!46;UBERON:0002193!1.76e-12!48;UBERON:0002390!7.36e-09!45;UBERON:0003061!7.36e-09!45;UBERON:0002465!2.81e-08!3;UBERON:0002370!2.97e-08!23;UBERON:0000974!2.97e-08!23;UBERON:0004807!2.97e-08!23;UBERON:0005058!2.97e-08!23;UBERON:0003351!2.97e-08!23;UBERON:0009113!2.97e-08!23;UBERON:0003295!2.97e-08!23;UBERON:0009722!2.97e-08!23;UBERON:0005562!2.97e-08!23;UBERON:0007690!2.97e-08!23;UBERON:0002405!4.29e-08!70;UBERON:0006562!6.82e-08!24;UBERON:0003408!6.82e-08!24;UBERON:0001557!6.82e-08!24;UBERON:0001042!6.82e-08!24;UBERON:0008814!6.82e-08!24;UBERON:0009145!6.82e-08!24;UBERON:0000072!5.71e-07!27;UBERON:0003199!6.93e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.140788722151667,0,0.513653904676515,0.0797721589953364,3.93761678841773,0.699363219351979,0,0,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:126578226..126578238,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:126578226..126578238,+ | |||
|description=CAGE_peak_at_chr10:126578226..126578238,+ | |||
|id=chr10:126578226..126578238,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.12e-40!11;CL:0000827!2.12e-40!11;CL:0000791!2.38e-39!9;CL:0000789!2.38e-39!9;CL:0002420!2.38e-39!9;CL:0002419!2.38e-39!9;CL:0000790!2.38e-39!9;CL:0000838!5.85e-37!12;CL:0000542!4.78e-34!13;CL:0000051!4.78e-34!13;CL:0000624!8.14e-34!8;CL:0002031!8.64e-31!25;CL:0000738!8.15e-26!17;CL:0002087!8.15e-26!17;CL:0000988!9.71e-24!32;CL:0002032!9.71e-24!32;CL:0000037!9.71e-24!32;CL:0000566!9.71e-24!32;CL:0000837!9.71e-24!32;CL:0000893!4.56e-23!6;CL:0002489!4.56e-23!6;CL:0000898!4.56e-23!6;CL:0000809!4.56e-23!6;CL:0000810!4.56e-23!6;CL:0000895!4.56e-23!6;CL:0000808!4.56e-23!6;CL:0000894!4.56e-23!6;CL:0000806!4.56e-23!6;CL:0000807!4.56e-23!6;CL:0000805!4.56e-23!6;CL:0002425!4.56e-23!6;CL:0002436!4.56e-23!6;CL:0002427!4.56e-23!6;CL:0002428!4.56e-23!6;CL:0002429!4.56e-23!6;CL:0002433!4.56e-23!6;CL:0002431!4.56e-23!6;CL:0002432!4.56e-23!6;CL:0002320!4.72e-16!46;CL:0000134!4.72e-16!46;CL:0000219!1.93e-13!54;CL:0000063!1.06e-10!66;CL:0000553!6.57e-09!6;CL:0000556!6.57e-09!6;CL:0000034!4.83e-08!97;CL:0000723!2.67e-07!91;CL:0000048!2.67e-07!91;CL:0000625!3.14e-07!1;CL:0000815!4.10e-07!1;CL:0000792!4.10e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000624,3.49e-25,8;CL:0000625,5.07e-23,1;CL:0000815,1.39e-22,1;CL:0000792,1.39e-22,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.72e-16!46;UBERON:0002193!1.76e-12!48;UBERON:0002390!7.36e-09!45;UBERON:0003061!7.36e-09!45;UBERON:0002465!2.81e-08!3;UBERON:0002370!2.97e-08!23;UBERON:0000974!2.97e-08!23;UBERON:0004807!2.97e-08!23;UBERON:0005058!2.97e-08!23;UBERON:0003351!2.97e-08!23;UBERON:0009113!2.97e-08!23;UBERON:0003295!2.97e-08!23;UBERON:0009722!2.97e-08!23;UBERON:0005562!2.97e-08!23;UBERON:0007690!2.97e-08!23;UBERON:0002405!4.29e-08!70;UBERON:0006562!6.82e-08!24;UBERON:0003408!6.82e-08!24;UBERON:0001557!6.82e-08!24;UBERON:0001042!6.82e-08!24;UBERON:0008814!6.82e-08!24;UBERON:0009145!6.82e-08!24;UBERON:0000072!5.71e-07!27;UBERON:0003199!6.93e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.140788722151667,0,0.513653904676515,0.0797721589953364,3.93761678841773,0.699363219351979,0,0,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:126578226..126578238,+ | |||
}} |
Latest revision as of 00:44, 4 August 2015
Short description: | p@chr10:126578226..126578238, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126578226..126578238, + |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.75e-39 | 9 |
alpha-beta T cell | 3.75e-39 | 9 |
immature T cell | 3.75e-39 | 9 |
mature T cell | 3.75e-39 | 9 |
immature alpha-beta T cell | 3.75e-39 | 9 |
T cell | 3.07e-32 | 11 |
pro-T cell | 3.07e-32 | 11 |
lymphoid lineage restricted progenitor cell | 1.21e-29 | 12 |
lymphocyte | 1.91e-27 | 13 |
common lymphoid progenitor | 1.91e-27 | 13 |
CD4-positive, alpha-beta T cell | 3.49e-25 | 8 |
CD8-positive, alpha-beta T cell | 5.07e-23 | 1 |
regulatory T cell | 1.39e-22 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.39e-22 | 1 |
leukocyte | 3.13e-21 | 17 |
nongranular leukocyte | 3.13e-21 | 17 |
hematopoietic lineage restricted progenitor cell | 9.61e-15 | 25 |
hematopoietic cell | 1.03e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.03e-11 | 32 |
hematopoietic stem cell | 1.03e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.03e-11 | 32 |
connective tissue cell | 2.15e-08 | 46 |
mesenchymal cell | 2.15e-08 | 46 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.15e-08 | 46 |