FFCP PHASE1:Mm9::chr11:32454966..32454978,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=285|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:32454966..32454978,+|id=chr11:32454966..32454978,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,3.14e-11,9;CL:0000789,3.14e-11,9;CL:0002420,3.14e-11,9;CL:0002419,3.14e-11,9;CL:0000790,3.14e-11,9;CL:0000084,3.20e-09,11;CL:0000827,3.20e-09,11;CL:0000838,1.82e-08,12;CL:0000542,7.93e-08,13;CL:0000051,7.93e-08,13;CL:0000815,1.38e-07,1;CL:0000792,1.38e-07,1;CL:0000625,1.59e-07,1;CL:0000624,1.74e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.20e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.68e-09,6;UBERON:0004457,2.68e-09,6;UBERON:0000042,2.68e-09,6;UBERON:0004854,2.68e-09,6;UBERON:0009034,2.68e-09,6;UBERON:0002095,2.68e-09,6;UBERON:0004782,2.68e-09,6;UBERON:0003281,2.68e-09,6;UBERON:0009664,2.68e-09,6;UBERON:0002296,2.68e-09,6;UBERON:0005602,2.68e-09,6;UBERON:0001179,2.68e-09,6;UBERON:0006293,2.68e-09,6;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0,0,3.09895976259783,0.140788722151667,0.70219357896598,0,0,1.88320802924326,2.88487327982691,0.666219523631325,0.809901069559304,0,0.315462165358238,1.23402990245165,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,3.02484419228218,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,4.14300613835475,0.593768556259299,0,0,0,0.150722640552623,0,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.482354319504834,1.01850340712568,1.43848068725405,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.358794827043824,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.983179888294428,0.863424909329478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.968786560175433,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0,1.02522528478712,2.06386867963222,1.29636169158798,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0.139951452323658,0.690999869022119,0.954670618015114,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0.824140228955577,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.0640251524048693,0.17230640686684,0,0.347652977834566,0,0.412085900803307,0.588795680537589,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.964533054905707,0,0.233931608445408,0,0,0.441182838239031,0.231867835620421|short_description=p@chr11:32454966..32454978,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:32454966..32454978,+ | |||
|description=CAGE_peak_at_chr11:32454966..32454978,+ | |||
|id=chr11:32454966..32454978,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.14e-11,9;CL:0000789,3.14e-11,9;CL:0002420,3.14e-11,9;CL:0002419,3.14e-11,9;CL:0000790,3.14e-11,9;CL:0000084,3.20e-09,11;CL:0000827,3.20e-09,11;CL:0000838,1.82e-08,12;CL:0000542,7.93e-08,13;CL:0000051,7.93e-08,13;CL:0000815,1.38e-07,1;CL:0000792,1.38e-07,1;CL:0000625,1.59e-07,1;CL:0000624,1.74e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.20e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.68e-09,6;UBERON:0004457,2.68e-09,6;UBERON:0000042,2.68e-09,6;UBERON:0004854,2.68e-09,6;UBERON:0009034,2.68e-09,6;UBERON:0002095,2.68e-09,6;UBERON:0004782,2.68e-09,6;UBERON:0003281,2.68e-09,6;UBERON:0009664,2.68e-09,6;UBERON:0002296,2.68e-09,6;UBERON:0005602,2.68e-09,6;UBERON:0001179,2.68e-09,6;UBERON:0006293,2.68e-09,6;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0,0,3.09895976259783,0.140788722151667,0.70219357896598,0,0,1.88320802924326,2.88487327982691,0.666219523631325,0.809901069559304,0,0.315462165358238,1.23402990245165,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,3.02484419228218,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,4.14300613835475,0.593768556259299,0,0,0,0.150722640552623,0,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.482354319504834,1.01850340712568,1.43848068725405,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.358794827043824,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.983179888294428,0.863424909329478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.968786560175433,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0,1.02522528478712,2.06386867963222,1.29636169158798,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0.139951452323658,0.690999869022119,0.954670618015114,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0.824140228955577,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.0640251524048693,0.17230640686684,0,0.347652977834566,0,0.412085900803307,0.588795680537589,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.964533054905707,0,0.233931608445408,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr11:32454966..32454978,+ | |||
}} |
Latest revision as of 19:55, 5 August 2015
Short description: | p@chr11:32454966..32454978, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:32454966..32454978, + |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.14e-11 | 9 |
alpha-beta T cell | 3.14e-11 | 9 |
immature T cell | 3.14e-11 | 9 |
mature T cell | 3.14e-11 | 9 |
immature alpha-beta T cell | 3.14e-11 | 9 |
T cell | 3.20e-09 | 11 |
pro-T cell | 3.20e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.82e-08 | 12 |
lymphocyte | 7.93e-08 | 13 |
common lymphoid progenitor | 7.93e-08 | 13 |
regulatory T cell | 1.38e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.38e-07 | 1 |
CD8-positive, alpha-beta T cell | 1.59e-07 | 1 |
CD4-positive, alpha-beta T cell | 1.74e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.68e-09 | 6 |
cavity lining | 2.68e-09 | 6 |
serous membrane | 2.68e-09 | 6 |
gastrointestinal system mesentery | 2.68e-09 | 6 |
stomach region | 2.68e-09 | 6 |
mesentery | 2.68e-09 | 6 |
gastrointestinal system serosa | 2.68e-09 | 6 |
mesentery of stomach | 2.68e-09 | 6 |
gut mesentery | 2.68e-09 | 6 |
dorsal mesentery | 2.68e-09 | 6 |
dorsal mesogastrium | 2.68e-09 | 6 |
peritoneal cavity | 2.68e-09 | 6 |
spleen primordium | 2.68e-09 | 6 |
lymph node | 1.20e-07 | 1 |
axillary lymph node | 1.20e-07 | 1 |
peripheral lymph node | 1.20e-07 | 1 |
shoulder | 1.20e-07 | 1 |