FFCP PHASE1:Mm9::chr11:71949490..71949511,-: Difference between revisions
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{{FFCP|EntrezGene=327958|HGNC=|MCL_coexpression_id=53|UniProt=Q3UHE1|association_with_transcript=-99bp_to_NM_001024927,NM_001081641,uc007jya.1,uc007jyb.1,uc007jyc.1_5end|description=CAGE_peak_7_at_Pitpnm3_5end|id=chr11:71949490..71949511,-|ontology_enrichment_celltype=CL:0000117!3.03e-07!23;CL:0000337!3.03e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.97e-09!71;UBERON:0003075!3.97e-09!71;UBERON:0007284!3.97e-09!71;UBERON:0004121!1.06e-07!102;UBERON:0000924!1.06e-07!102;UBERON:0006601!1.06e-07!102;UBERON:0003076!1.33e-07!12;UBERON:0003057!1.33e-07!12;UBERON:0001948!3.43e-07!5;UBERON:0002315!3.43e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.75e-39,9;UBERON:0000019,3.75e-39,9;UBERON:0000047,3.75e-39,9;UBERON:0010312,3.75e-39,9;UBERON:0004088,3.75e-39,9;UBERON:0002104,3.75e-39,9;UBERON:0001456,3.75e-39,9;UBERON:0003072,3.75e-39,9;UBERON:0004128,3.75e-39,9;UBERON:0003071,3.75e-39,9;UBERON:0001444,3.07e-32,11;UBERON:0000020,1.21e-29,12;UBERON:0001032,1.21e-29,12;UBERON:0004456,1.21e-29,12;UBERON:0000033,1.91e-27,13;UBERON:0005085,1.91e-27,13;UBERON:0007811,1.67e-10,36;UBERON:0000153,6.31e-09,43;UBERON:0003056,6.29e-08,49|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.457438218012048,0,0.279182999001381,0,0,0,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0,0,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0,1.08858398642125,2.17793324484245,5.62210347358373,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p7@Pitpnm3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:327958 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UHE1 | |||
|association_with_transcript=-99bp_to_NM_001024927,NM_001081641,uc007jya.1,uc007jyb.1,uc007jyc.1_5end | |||
|cluster_id=chr11:71949490..71949511,- | |||
|description=CAGE_peak_7_at_Pitpnm3_5end | |||
|id=chr11:71949490..71949511,- | |||
|ontology_enrichment_celltype=CL:0000117!3.03e-07!23;CL:0000337!3.03e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.97e-09!71;UBERON:0003075!3.97e-09!71;UBERON:0007284!3.97e-09!71;UBERON:0004121!1.06e-07!102;UBERON:0000924!1.06e-07!102;UBERON:0006601!1.06e-07!102;UBERON:0003076!1.33e-07!12;UBERON:0003057!1.33e-07!12;UBERON:0001948!3.43e-07!5;UBERON:0002315!3.43e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.75e-39,9;UBERON:0000019,3.75e-39,9;UBERON:0000047,3.75e-39,9;UBERON:0010312,3.75e-39,9;UBERON:0004088,3.75e-39,9;UBERON:0002104,3.75e-39,9;UBERON:0001456,3.75e-39,9;UBERON:0003072,3.75e-39,9;UBERON:0004128,3.75e-39,9;UBERON:0003071,3.75e-39,9;UBERON:0001444,3.07e-32,11;UBERON:0000020,1.21e-29,12;UBERON:0001032,1.21e-29,12;UBERON:0004456,1.21e-29,12;UBERON:0000033,1.91e-27,13;UBERON:0005085,1.91e-27,13;UBERON:0007811,1.67e-10,36;UBERON:0000153,6.31e-09,43;UBERON:0003056,6.29e-08,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.457438218012048,0,0.279182999001381,0,0,0,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0,0,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0,1.08858398642125,2.17793324484245,5.62210347358373,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p7@Pitpnm3 | |||
}} |
Revision as of 22:13, 3 August 2015
Short description: | p7@Pitpnm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Pitpnm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | -99bp_to_NM_001024927, NM_001081641, uc007jya.1, uc007jyb.1, uc007jyc.1_5end |
EntrezGene: | 327958 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.75e-39 | 9 |
camera-type eye | 3.75e-39 | 9 |
simple eye | 3.75e-39 | 9 |
immature eye | 3.75e-39 | 9 |
ocular region | 3.75e-39 | 9 |
visual system | 3.75e-39 | 9 |
face | 3.75e-39 | 9 |
optic cup | 3.75e-39 | 9 |
optic vesicle | 3.75e-39 | 9 |
eye primordium | 3.75e-39 | 9 |
subdivision of head | 3.07e-32 | 11 |
sense organ | 1.21e-29 | 12 |
sensory system | 1.21e-29 | 12 |
entire sense organ system | 1.21e-29 | 12 |
head | 1.91e-27 | 13 |
ectodermal placode | 1.91e-27 | 13 |
craniocervical region | 1.67e-10 | 36 |
anterior region of body | 6.31e-09 | 43 |
pre-chordal neural plate | 6.29e-08 | 49 |