FFCP PHASE1:Mm9::chr12:76409614..76409621,+: Difference between revisions
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{{FFCP|EntrezGene=80837|HGNC=|MCL_coexpression_id=1247|UniProt=|association_with_transcript=-38bp_to_ENSMUST00000146096_5end|description=CAGE_peak_12_at_Rhoj_5end|id=chr12:76409614..76409621,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,2.18e-14,3;CL:0000737,2.18e-14,3;CL:0000746,2.18e-14,3;CL:0000513,2.18e-14,3;CL:0000680,1.53e-12,6;CL:0000187,1.53e-12,6;CL:0000056,1.53e-12,6;CL:0000222,8.99e-11,7;CL:0000355,2.09e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.09e-08,9;UBERON:0002036,2.09e-08,9;UBERON:0002385,2.09e-08,9;UBERON:0000486,2.09e-08,9;UBERON:0007503,2.09e-08,9;UBERON:0001015,2.09e-08,9;UBERON:0002329,2.09e-08,9;UBERON:0003082,2.09e-08,9;UBERON:0003059,2.09e-08,9;UBERON:0007282,2.09e-08,9;UBERON:0004290,2.09e-08,9;UBERON:0009618,2.09e-08,9;UBERON:0000474,2.73e-08,9;UBERON:0005156,8.91e-08,26;UBERON:0000990,8.91e-08,26;UBERON:0000383,1.42e-07,10;UBERON:0007524,6.82e-07,11;UBERON:0003077,6.82e-07,11;UBERON:0007285,6.82e-07,11;UBERON:0003100,8.44e-07,11|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.304130793658544,0.367093504323363,0,0.218025156380447,0.439372365468944,0.972149495371417,0.419959264876088,0,0,0,0,5.40244815675489,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.284743361598206,0.372798891650601,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0,0.852151612890289,0.259786004602869,0.70667914902068,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.741584903203122,1.01219549843938,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,1.42575109390443,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0.900310649026746,0,0.748401490664606,0,0.562210347358373,0.517406741478031,0,0,0,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0.617068451549513,0,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0.324275238183423,0.292399974850665,0.439100230582101,0.536825675041487,0.210289948564127,0,0,0,0.213288250535234,0.928946687441754,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.379335801906163,0.456994050438915,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0.502518772325447,0.476087281772027,1.17080188714679,0.315270288212382,0.8858587585951,0.318909537314974,0.327726629431476,0,0.578596234326046,0,0,0,0.275936746304732,0,0,0.819674726883377,0.252470927204373,0.631016438832513,0,0,0,0.222798674082394,0,0,0,0.790575555893047,0,0.283880170416537,0.712262414669021,1.30309567482861,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,1.47650946440386,0.307435147943927,0.775284879504663,0,0.712994756769443,0.632073515871632,0,0,0,0,0.646793418913773,0,0,0.356737635204141,0,0.608929898229199,0.704015124191131,0,0,0.16488625294148,1.61464426695906,0.422190474497091,0.238744688006273,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,1.04544148007234,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.129614973291793,0,0,0.747582730219894,1.15820943319968,0.972255941720238,0.774958940866387,1.68956125490778,0.704143431874524,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,3.19060208267009,1.28206136987086,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.44449345560323,0,0.962757628775446,0,0.25347929989024,0.188626341386076,0.187283014939765,0.512201219238954,0.402048282689293,1.42888107384922,0.231768651889711,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.507687647350059,0.914639864363863,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.77468420592983,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,1.14772999241306,0,0.927471342481686|short_description=p12@Rhoj}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80837 | |||
|HGNC= | |||
|MCL_coexpression_id=1247 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENSMUST00000146096_5end | |||
|cluster_id=chr12:76409614..76409621,+ | |||
|description=CAGE_peak_12_at_Rhoj_5end | |||
|id=chr12:76409614..76409621,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.18e-14,3;CL:0000737,2.18e-14,3;CL:0000746,2.18e-14,3;CL:0000513,2.18e-14,3;CL:0000680,1.53e-12,6;CL:0000187,1.53e-12,6;CL:0000056,1.53e-12,6;CL:0000222,8.99e-11,7;CL:0000355,2.09e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.09e-08,9;UBERON:0002036,2.09e-08,9;UBERON:0002385,2.09e-08,9;UBERON:0000486,2.09e-08,9;UBERON:0007503,2.09e-08,9;UBERON:0001015,2.09e-08,9;UBERON:0002329,2.09e-08,9;UBERON:0003082,2.09e-08,9;UBERON:0003059,2.09e-08,9;UBERON:0007282,2.09e-08,9;UBERON:0004290,2.09e-08,9;UBERON:0009618,2.09e-08,9;UBERON:0000474,2.73e-08,9;UBERON:0005156,8.91e-08,26;UBERON:0000990,8.91e-08,26;UBERON:0000383,1.42e-07,10;UBERON:0007524,6.82e-07,11;UBERON:0003077,6.82e-07,11;UBERON:0007285,6.82e-07,11;UBERON:0003100,8.44e-07,11 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.304130793658544,0.367093504323363,0,0.218025156380447,0.439372365468944,0.972149495371417,0.419959264876088,0,0,0,0,5.40244815675489,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.284743361598206,0.372798891650601,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0,0.852151612890289,0.259786004602869,0.70667914902068,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.741584903203122,1.01219549843938,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,1.42575109390443,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0.900310649026746,0,0.748401490664606,0,0.562210347358373,0.517406741478031,0,0,0,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0.617068451549513,0,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0.324275238183423,0.292399974850665,0.439100230582101,0.536825675041487,0.210289948564127,0,0,0,0.213288250535234,0.928946687441754,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.379335801906163,0.456994050438915,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0.502518772325447,0.476087281772027,1.17080188714679,0.315270288212382,0.8858587585951,0.318909537314974,0.327726629431476,0,0.578596234326046,0,0,0,0.275936746304732,0,0,0.819674726883377,0.252470927204373,0.631016438832513,0,0,0,0.222798674082394,0,0,0,0.790575555893047,0,0.283880170416537,0.712262414669021,1.30309567482861,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,1.47650946440386,0.307435147943927,0.775284879504663,0,0.712994756769443,0.632073515871632,0,0,0,0,0.646793418913773,0,0,0.356737635204141,0,0.608929898229199,0.704015124191131,0,0,0.16488625294148,1.61464426695906,0.422190474497091,0.238744688006273,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,1.04544148007234,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.129614973291793,0,0,0.747582730219894,1.15820943319968,0.972255941720238,0.774958940866387,1.68956125490778,0.704143431874524,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,3.19060208267009,1.28206136987086,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.44449345560323,0,0.962757628775446,0,0.25347929989024,0.188626341386076,0.187283014939765,0.512201219238954,0.402048282689293,1.42888107384922,0.231768651889711,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.507687647350059,0.914639864363863,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.77468420592983,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,1.14772999241306,0,0.927471342481686 | |||
|short_description=p12@Rhoj | |||
}} |
Revision as of 05:53, 5 August 2015
Short description: | p12@Rhoj |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rhoj_5end |
Coexpression cluster: | MCL_coexpression_mm9:1247 |
Association with transcript: | -38bp_to_ENSMUST00000146096_5end |
EntrezGene: | 80837 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.18e-14 | 3 |
striated muscle cell | 2.18e-14 | 3 |
cardiac muscle cell | 2.18e-14 | 3 |
cardiac muscle myoblast | 2.18e-14 | 3 |
muscle precursor cell | 1.53e-12 | 6 |
muscle cell | 1.53e-12 | 6 |
myoblast | 1.53e-12 | 6 |
mesodermal cell | 8.99e-11 | 7 |
multi-potent skeletal muscle stem cell | 2.09e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.09e-08 | 9 |
striated muscle tissue | 2.09e-08 | 9 |
muscle tissue | 2.09e-08 | 9 |
multilaminar epithelium | 2.09e-08 | 9 |
epithelial vesicle | 2.09e-08 | 9 |
musculature | 2.09e-08 | 9 |
somite | 2.09e-08 | 9 |
myotome | 2.09e-08 | 9 |
presomitic mesoderm | 2.09e-08 | 9 |
presumptive segmental plate | 2.09e-08 | 9 |
dermomyotome | 2.09e-08 | 9 |
trunk paraxial mesoderm | 2.09e-08 | 9 |
female reproductive system | 2.73e-08 | 9 |
reproductive structure | 8.91e-08 | 26 |
reproductive system | 8.91e-08 | 26 |
musculature of body | 1.42e-07 | 10 |
dense mesenchyme tissue | 6.82e-07 | 11 |
paraxial mesoderm | 6.82e-07 | 11 |
presumptive paraxial mesoderm | 6.82e-07 | 11 |
female organism | 8.44e-07 | 11 |