FFCP PHASE1:Hg19::chr3:29322437..29322448,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13427 | |||
|TSSclassifier=strong | |||
|UniProt=C9JIJ9 | |||
|association_with_transcript=-24bp_to_ENST00000434693_5end | |||
|description=CAGE_peak_5_at_RBMS3_5end | |||
|id=chr3:29322437..29322448,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.06e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.43e-08;4!UBERON:0007284;2.43e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.09e-11!94;UBERON:0001016!8.09e-11!94;UBERON:0007023!6.00e-10!115;UBERON:0000475!1.71e-09!365;UBERON:0001017!2.50e-09!82;UBERON:0000924!2.81e-09!173;UBERON:0006601!2.81e-09!173;UBERON:0000481!3.08e-09!347;UBERON:0005743!4.15e-09!86;UBERON:0004121!7.85e-09!169;UBERON:0002346!2.44e-08!90;UBERON:0000477!5.42e-08!286;UBERON:0003075!6.93e-08!86;UBERON:0007284!6.93e-08!86;UBERON:0001049!7.42e-08!57;UBERON:0005068!7.42e-08!57;UBERON:0006241!7.42e-08!57;UBERON:0007135!7.42e-08!57;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0002616!2.39e-07!59;UBERON:0004111!7.26e-07!241;UBERON:0000153!8.24e-07!129;UBERON:0007811!8.24e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;9.31e-07;3!UBERON:0000946;9.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,3.92e-07,7;UBERON:0003978,6.87e-07,3;UBERON:0009751,6.87e-07,3;UBERON:0000946,6.87e-07,3;UBERON:0002523,6.87e-07,3;UBERON:0005983,6.87e-07,3;UBERON:0002165,6.87e-07,3;UBERON:0002062,6.87e-07,3;UBERON:0007280,6.87e-07,3 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.12763523276777,2.00146596706261,0,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0.286235987131057,0.136874425072884,0,1.52826811495903,0.903106483949403,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0.83593247695339,3.58514493296949,1.89379122293893,3.89653456815823,0,0,0.664601683750863,0.541607727530031,0,0,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,1.44575660953827,0,0.144846518960824,0,0,0.567208902984407,2.88248216701333,0.702678285545008,0.130979075497713,0,0.370784442784429,0,0,0,2.8618874916641,1.71598473234038,2.22874500797739,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0,0,0,0.436094052142534,0.993943903390637,0.506522046658319,1.19168262731897,1.72101972449288,0,0,0,0.74000264525148,0.622422070799533,0.404132016209064,0.653847612453835,0,0.576175924479999,0,0,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0,0,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,1.33968288009971,0.515281080091258,0.18611685633159,1.5189869901714,0.292311015483596,2.01947019395292,1.01254888506529,0.646584227275248,1.06502877754984,0.201504196455281,0,0.386521706326594,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.330881918197182,0,0,0,0,0.769494313892781,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0.587043471179108,0.433099343283221,0.462985512576611,1.52203321787679,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0,0.87192013766656,0.1466765716419,0.904902010304444,0,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0.542621605391443,2.46972101034231,0,0.710783897485092,0,1.50719688529793,0,0.799783929456456,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,0.623912584592421,1.60586089917446,1.10391690523754,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.992431231275107,1.2276957863045,0.561320188866147,0.640695746278505,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0.184161977871793,0.229628896329213,0.546273504020151,0.131124414959424,0.902399225814824,0.15403067420883,0,0,0.527758144464379,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0.616194468458578,0.307007349452259,0.137836572484531,0.214840489736547,0.580066775656914,0,0.534192213880424,0.330569830721956,0.384380134730212,0.127612712494584,0,0.464845549297286,2.51849877464512,0.6970372701606,0.924100740528266,0,0,0.18532421910392,1.00187420719394,0.372158369359667,0.632758849437452,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.719489830333259,1.09814811894422,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.409499734223957,0.707027159768564,0,1.10273068709225,0.66343897524122,0.438450885253763,0.578775534266688,2.62357900818653,0,0,0.563391205064483,0.860468113224309,0.785992328104969,0.35667105148125,0,0,0,0.379473173765715,0,0,0,1.08890984861323,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78704762688578,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.970884173996107,0.334330152832435,0.284136146806413,0,0.890894042497916,0.307160702099232,0,0.422008249231538,0.556543525114529,0.494411622680279,0,1.19548792950642,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0,0,0,0.295930216910801,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0.945550727071745,1.03423011972439,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0.557694977114413,0.461701551022782,0.797594390929008,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.202203398942031,1.60515529459758,0.234264445725339,0,0.19566461893209,0,0.789168805698781,3.62972148145992,0.30607276163049,0.442306057399416,0.300646838828985,0.311064574191741,0,0,0,2.38944859545918,0,0.832048038078832,0.173559738335131,0,0.435296032902013,1.57254001417827,1.0319161948297,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0.794305140223502,0.90392296312213,0.411125773940253,0.19871461170299,0.50648636764703,0,0.160317640503067,0.640358984218058,0.599428828746391,0,3.32156128881155,0,0,0.49701014226173,0.942776138467182,1.22313785466253,0.941425616810999,0.509991088181609,0.288950589901519,1.80126086612937,0.273810757783986,0,3.86788897277961,0,1.67569440763353,1.14580212005842,2.87149209830726,0.798716001995964,0.858452096273142,0.223171457441873,1.47803639470798,1.44119953416961,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0.643012593860077,1.10031549277787,0.83088067605837,0,0,0.668245123238271,0,0,0.262272940674991,0.633602019116439,0.537862017998534,0.767660789277781,0,0.662091970365432,1.5256112259285,1.08599920350743,1.72844298240254,0,0,0.164185041498678,0.170388021785422,0.339936274560377,0,0,2.45637617086946,1.45455861916959,0,0,0.427149650270779,0.78602152549833,0.828478110694391,0,0,4.01915574656957,0,0,0,0,0.327872630709804,0,2.65820453990096,1.22026264901963,0.751145584238999,1.14681839138014,0.443716206147409,0.558867626472451,0,0.124980407962107,0.454947352624943,0,0,0,0,0,0.467426619694449,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0.151230923763239,0,0,0.63718706865481,0,0,0,0.265841714557995,0.521745061811734,0.601030435988874,0.761610424337591,0,0.363697318405119,0.429642228169954,0.928067519756987,0.796191777397232,0,0.343395705182793,0.673498977531838,0,0.963099152036517,1.28664954824955,0.260994291965212,0.226705925512272,0.926089897295336,0.489473409012935,0.358177682162975,0.617602894321944,1.31570429747224,0.706756583783524,0.192914038270915,0.675769762612291,0,0.345430341731199,0,0.967809053062115,0,0,0,0.655219697692825,1.47463745252232,0,0.59996218756479,0,0,2.83757976783418,0,0,0,1.79052119825112,2.15649622793364,0,2.83945059299236,0.678930119816101,0.425149840203366,0.371807292777007,0,1.59002175326709,0,0,1.41070377476274,0.6124909547064,0.321146125482298,0,0.638535436228605,1.23069818544453,1.00828678488687,0.345786262321089,0.484426936895553,2.85538840518309,0,0.235939446695481,0,0.115525666150338,0.762764190934334,0,0.596748666348824,0.977734268540344,0.80682027481408,0,0,0.818859587550484,0.147856086217045,0.337687923091973,0.781078098613847,1.03343398250592,0.317079050969534,1.09394961803644,0,0.992422356778588,0.175871244359621,0.766574565837572,2.14280734351315,0.672567444437648,0,0.227662191351298,0,0.230467975111559,4.11571222649804,0.203909198930495,0.131545547125698,0.236387681767936,0.333694205676207,0.706437835654626,0.314231179832004,0,1.82631744101899,0.215927591218621,0,1.6439605160631,0,0,1.73858272302579,0.801711364730253,0.828864656652147,0.6828739083758,1.38251932362818,1.29068207646083,0.473328002922261,0.340853619036631,1.69354820076372,0.4582137370881,0.93061915699296,0.955538938977433,0,0,0,3.23714418593947,0.615976841137482,6.95888658802919,3.88568794447312,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,1.22574160876953,0,0.785233868459781,0.297046400327086,1.6906229103336,0,0.187967835959707,0.515663103788617,1.09935271517422,0,0,0,0.730336388246517,0.458729283404541,0.286679166302903,0.473314686579554,0.407948941145488,0.436350690340377,1.5870805215462,0,0.462175628631418,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0.682008283964155,0,0,0.517164979309476,1.0661699095049,3.80903090341985,0.258355639344024,1.42771842880473,1.56984607612859,1.0820016907288,3.63810940124795,0.870866991587845,0.684466602170562,0.134704106029175,0.215166616178029,2.32862249582209,0,0.320182037633146,9.653614114347,0,0,0.488965776731466,1.22068853494722,0.665756774185513,0.201273793591026,0.641136984606466 | |||
|short_description=p5@RBMS3 | |||
}} |
Revision as of 17:59, 21 January 2014
Short description: | p5@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBMS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000434693_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | C9JIJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 3.92e-07 | 7 |
valve | 6.87e-07 | 3 |
cardiac mesenchyme | 6.87e-07 | 3 |
cardial valve | 6.87e-07 | 3 |
tunica intima | 6.87e-07 | 3 |
heart layer | 6.87e-07 | 3 |
endocardium | 6.87e-07 | 3 |
endocardial cushion | 6.87e-07 | 3 |
presumptive endocardium | 6.87e-07 | 3 |