FFCP PHASE1:Hg19::chr3:52720016..52720057,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29931 | |||
|TSSclassifier=strong | |||
|UniProt=B4DMU5 | |||
|association_with_transcript=0bp_to_ENST00000394799,ENST00000462550,ENST00000468146,ENST00000468885,ENST00000492349_5end | |||
|description=CAGE_peak_1_at_GNL3_5end | |||
|id=chr3:52720016..52720057,+ | |||
|ontology_enrichment_celltype=CL:0000012!6.07e-07!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.67e-50!235;DOID:14566!4.76e-50!239;DOID:0050687!1.08e-26!143;DOID:0050686!3.89e-22!137;DOID:305!1.24e-21!106;DOID:2531!7.29e-18!51;DOID:0060083!7.29e-18!51;DOID:1240!4.43e-14!39;DOID:8692!8.78e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.10e-11;39!DOID:8692;2.41e-11;31!DOID:2531;8.15e-11;51!DOID:0060083;8.15e-11;51!DOID:0050687;2.45e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.67e-50,235;DOID:14566,4.76e-50,239;DOID:0050687,1.08e-26,143;DOID:0050686,3.89e-22,137;DOID:305,1.24e-21,106;DOID:2531,7.29e-18,51;DOID:0060083,7.29e-18,51;DOID:1240,4.43e-14,39;DOID:8692,8.78e-12,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=91.5659031523605,70.0108713123515,109.662526386666,55.0403140942217,67.9380863529477,70.6594204521299,68.3909671054438,109.919257976269,67.1247064473585,29.9795402531841,13.9560233594486,25.3391991671,9.75937819445278,84.7799517776319,48.7154142320036,95.4701707961521,75.3368160029971,81.0644200329984,61.4795326476039,33.8582909711167,15.0960511520747,11.5978246946892,90.736807920545,64.3309797842556,79.4684908635102,220.0706085541,255.661235547131,264.783068339217,21.6350352266897,59.1097273069708,34.8336277461171,113.088810610908,28.915768202712,53.2445774640174,261.296867557357,336.372404065239,109.512963871898,27.145775018062,23.4637003540066,28.2114131930607,24.8546176406316,29.4743236077271,25.4999811957845,14.2490274003973,37.0318424815033,27.654582975411,25.3347650227196,37.4162778099861,52.0306703103774,17.261543539329,34.0693739683704,40.9114257707252,24.8216890130365,54.2207134210414,41.9822108442459,17.6947799170048,30.2925826564209,40.6749506845603,13.7737751566906,36.9068381137508,32.6061934157511,12.8642007072819,26.7281301212987,32.8193057910174,15.9615081245721,31.2061873580127,42.9747351806947,25.8786125214446,48.4979114130787,62.3331984303685,18.7673845816344,38.3008741427067,35.4437873933791,58.3064590220959,52.3006577914007,44.8669501387924,36.3944764914644,47.455898137916,51.1107365696715,26.7911979116774,38.7887520538226,43.1087402884536,72.1584602291423,83.013068911844,88.0614161324919,81.5054725102029,94.4934529404989,95.4089050324442,87.2579232076018,81.0945691355059,74.5668989533377,91.0217643524955,73.7787330281692,51.5468181458201,101.452049899658,190.690077377156,94.6173994247537,57.7725821241272,51.8115777478763,102.986881160658,89.6286233242374,117.415055822214,87.6720277835601,63.9496022520896,66.2863291818384,73.7707868963458,88.8236673149251,49.699432053562,45.7808903410771,52.1268157593653,51.1247532903819,97.9534429784477,114.180653634787,119.055668499922,81.5377085678819,80.449633315272,70.1293503291516,71.1308812149044,126.256826317732,83.7827039672374,79.4321813704831,56.0766706224541,98.7772781150189,100.853449589682,77.4570504624544,74.5848343938653,59.9423437752364,73.3848545338026,54.290359744052,62.8537912851348,134.093776472679,54.9974704956982,92.828219898403,134.455364687059,78.2087140591988,65.760319608214,167.805334827782,76.8883095078165,84.986800630497,77.8270185093599,74.3082286963846,26.5887523260357,13.8432209551166,23.7302043382035,59.7167204324617,58.5075917325538,34.4361117743861,103.027949699908,86.3712315277993,109.951420393551,77.3185764656483,45.5924335406246,64.9152738006201,63.8797974374131,53.695927834868,91.3391899241024,49.1138171361505,70.2893584940575,90.3646307224244,99.4120219911071,27.7952228805311,70.7053058318217,16.1080957981792,177.9489308874,42.9375232377333,134.128191882688,81.7286916359258,89.0756810623079,39.8623257411296,46.5140173188383,61.5557859606168,18.4492584410489,23.2668158488995,15.6993858771312,91.9398110636339,110.04191463652,161.539200592127,147.147186444141,81.5737279056221,79.0555416200653,57.6444576940407,43.6601560698373,122.928358982908,72.7437629176316,83.6924943940909,21.7954695808701,36.2990832422399,37.7257505252413,124.864030732128,105.537286985723,99.6822699280513,144.914171326406,126.422769551511,151.265518818322,137.804065597053,96.1792704551143,97.5395374299226,65.340157150513,58.1077283804609,21.8438726865126,7.18618141816238,136.857260644656,100.970645536675,181.199931526656,78.57699413767,57.9261934060147,51.6818922638693,124.661969292863,162.168230662731,125.785302014136,161.492108683586,126.638442547618,160.349735495011,148.658591606328,108.320010384985,160.168739296962,119.360331322468,142.120214899436,109.171179789767,143.056760284649,118.928213493066,109.517530773445,122.083626463551,75.9515152931757,92.7336810008838,82.3129188766441,198.451219872852,258.565577995218,216.353121623043,120.143162762814,159.719098604273,188.693294642204,45.3703643756466,52.7457569318166,16.5761905622977,97.0528969586836,58.4722380152364,160.778941254148,163.189979995602,185.096470950514,159.926260461971,169.510207503892,186.494706621322,151.550390372025,167.769352682171,174.290462096715,11.0723318193697,8.41450642820675,15.2282384192618,17.641045366265,53.237114625169,122.853402084703,102.797443762564,154.512084795128,148.078080005909,123.35725560464,100.970262575936,41.5886487053192,110.782927597617,165.918493724085,42.6808879956525,24.9584348467099,102.475252837944,69.3263821750959,101.088885737042,76.0811179700859,49.5394498456973,74.7698818281971,22.915927540819,36.0564188079846,29.7922577365751,57.097040693974,30.618019431478,72.1750521698183,111.372150995844,158.788108911473,205.715926648443,206.059462406399,24.5364914665735,216.771824674215,68.4136332282766,87.6997928737466,64.7098590842157,75.745460055828,112.645264474308,55.7703101315085,22.2713149699089,23.9501424431787,155.475168967425,91.3042895845509,115.473878782754,50.7953812084484,32.697005162496,176.965283685952,116.861631045031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| |||
|short_description=p1@GNL3 | |||
}} |
Revision as of 19:13, 21 January 2014
Short description: | p1@GNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394799, ENST00000462550, ENST00000468146, ENST00000468885, ENST00000492349_5end |
EntrezGene: | GNL3 |
HGNC: | 29931 |
UniProt: | B4DMU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 2.67e-50 | 235 |
disease of cellular proliferation | 4.76e-50 | 239 |
cell type cancer | 1.08e-26 | 143 |
organ system cancer | 3.89e-22 | 137 |
carcinoma | 1.24e-21 | 106 |
hematologic cancer | 7.29e-18 | 51 |
immune system cancer | 7.29e-18 | 51 |
leukemia | 4.43e-14 | 39 |
myeloid leukemia | 8.78e-12 | 31 |