FFCP PHASE1:Hg19::chr3:55503705..55503721,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1929 | |||
|description=CAGE_peak_at_chr3:55503705..55503721,- | |||
|id=chr3:55503705..55503721,- | |||
|ontology_enrichment_celltype=CL:0000055!1.27e-11!180;CL:0000057!5.91e-11!75;CL:0002620!6.08e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.73e-11;19!CL:0002537;1.24e-10;5!CL:0000134;3.45e-10;55!CL:0000197;1.37e-08;6!CL:0000098;1.37e-08;6!CL:0002167;1.37e-08;6!CL:0000048;2.76e-08;58!CL:0000034;6.67e-08;69!CL:0002561;5.00e-07;2!CL:0000723;5.37e-07;61!CL:0002620;5.92e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.66e-12,19;CL:0002537,1.22e-10,5;CL:0000197,1.05e-08,6;CL:0000098,1.05e-08,6;CL:0002167,1.05e-08,6;CL:0000057,1.95e-07,76;CL:0002536,5.67e-07,2;CL:0002561,5.67e-07,2;CL:0002620,5.85e-07,23;CL:1000487,9.44e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.13e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.80e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.15e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.15e-11!95;UBERON:0005631!8.58e-11!14;UBERON:0000158!8.58e-11!14;UBERON:0000478!1.70e-09!24;UBERON:0000305!1.08e-07!7;UBERON:0002199!1.81e-07!45;UBERON:0002416!1.81e-07!45;UBERON:0002097!1.82e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.41e-15;7!UBERON:0005631;3.13e-14;10!UBERON:0000158;3.13e-14;10!UBERON:0000478;9.84e-09;24!UBERON:0005933;5.00e-07;2!UBERON:0005942;5.00e-07;2!UBERON:0005932;5.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.19e-16,14;UBERON:0000158,1.19e-16,14;UBERON:0000305,8.11e-16,7;UBERON:0004871,9.56e-14,8;UBERON:0000478,5.80e-09,24;UBERON:0003102,3.53e-07,99;UBERON:0004923,4.26e-07,66;UBERON:0005933,5.67e-07,2;UBERON:0005942,5.67e-07,2;UBERON:0005932,5.67e-07,2;UBERON:0002199,8.18e-07,46;UBERON:0002416,8.18e-07,46 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,1.74753097704138,1.58260186937072,0.247532705920093,0,2.01697543935533,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42158728576849,2.50668955317945,5.64901423947212,0.795285947051099,0,0.756278537312543,0.886917589850256,1.05401742831751,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0,0.61246251376468,0.61417158655884,0.413303124703062,2.37600571456411,11.6215456760922,0,0,0.505008341862199,0.250237039743928,0,0.438977620880838,4.29082914118628,1.65261864797256,0.226864366320042,0.717558542755448,1.70845911054854,3.17897851739343,0.900273288253207,0.92747276314595,1.8034837803194,1.11670113798954,0.337552664482532,0.487185025805993,1.51460264546469,2.11714766877288,0.646584227275248,1.06502877754984,0.403008392910561,0.508681776931463,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,3.21620469096443,0,1.39310378409594,2.16563844500876,0.591534000199219,1.01150814046861,0.482022059766964,0.992645754591546,1.08939722046203,0,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,3.98907174877306,3.12022310734098,0.257207374262142,0,0,0.714889968290738,0.542621605391443,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,1.3996218765488,0,0,0,0,0,0,1.15825045334063,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,1.87173775377726,17.3076119133247,4.25796520591624,1.28855556491985,0,0,0,1.99267679560631,0.184369168541703,1.30325421702124,0,0,0,0,0,0.606255142892519,3.32870879020994,1.81434175997808,0.496215615637554,0,0,0.384417447767103,0,1.12597744800525,0,2.62156479464514,0.887808626565635,0.246381468041427,4.15403543346897,1.39452454151951,0,0.601519410909855,0,0.574072240823034,1.63882051206045,0.917870904715969,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0.27470839445503,0.247528499761764,0,0.650060246036521,0,0.773365746336976,0,0,0.137836572484531,0,0.870100163485371,0.340906509664404,0.445160178233687,0,0.192190067365106,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,1.22849920267187,1.69686518344455,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.392996164052485,0,0,0,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,2.37571744666111,2.45728561679386,0,0,0.779160935160341,0,0.211125408127993,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.139423744278603,0,1.36730467016401,0,0,0.108647371922008,0.638002319463839,1.74035427463538,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0.802577647298789,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0.387025325156341,0.511625219603299,0.328461828212837,0.0969890164884194,0,0.90392296312213,0.137041924646751,0.397429223405979,0.0633107959558787,0,0.160317640503067,0,0.999048047910651,0,0,0.514784993585894,0,0,0.235694034616795,0.271808412147228,0.418411385249333,0.917983958726896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,2.3854323049959,0.339936274560377,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,1.19403842309499,0.467426619694449,0,1.51522404220071,0.251567901752575,1.77962244319307,0.228840068396924,0.151230923763239,0,0.73927574994817,1.43367090447332,3.14862178514523,0.776314784381297,0.414706207840855,0.797525143673985,6.78268580355254,1.20206087197775,1.14241563650639,0,1.81848659202559,1.18151612746737,0,5.97143833047924,2.80019435264208,0,0.336749488765919,0,0,0.643324774124777,0,0.453411851024545,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0,0,0,0.34543034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| |||
|short_description=p@chr3:55503705..55503721,- | |||
}} |
Revision as of 19:18, 21 January 2014
Short description: | p@chr3:55503705..55503721, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr3:55503705..55503721, - |
Coexpression cluster: | C1929_Fibroblast_Olfactory_mesenchymal_Chondrocyte_normal_Mesenchymal_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.66e-12 | 19 |
amnion mesenchymal stem cell | 1.22e-10 | 5 |
receptor cell | 1.05e-08 | 6 |
sensory epithelial cell | 1.05e-08 | 6 |
olfactory epithelial cell | 1.05e-08 | 6 |
fibroblast | 1.95e-07 | 76 |
amniotic epithelial cell | 5.67e-07 | 2 |
outer root sheath cell | 5.67e-07 | 2 |
skin fibroblast | 5.85e-07 | 23 |
smooth muscle cell of prostate | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.19e-16 | 14 |
membranous layer | 1.19e-16 | 14 |
amnion | 8.11e-16 | 7 |
somatic layer of lateral plate mesoderm | 9.56e-14 | 8 |
extraembryonic structure | 5.80e-09 | 24 |
surface structure | 3.53e-07 | 99 |
organ component layer | 4.26e-07 | 66 |
hair root sheath | 5.67e-07 | 2 |
hair outer root sheath | 5.67e-07 | 2 |
bulb of hair follicle | 5.67e-07 | 2 |
integument | 8.18e-07 | 46 |
integumental system | 8.18e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.15e-12 | 14 |