FFCP PHASE1:Hg19::chr4:140477928..140477990,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30412 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WTS6 | |||
|association_with_transcript=0bp_to_ENST00000274031_5end | |||
|coexpression_cluster_id=C3711 | |||
|description=CAGE_peak_4_at_SETD7_5end | |||
|id=chr4:140477928..140477990,- | |||
|ontology_enrichment_celltype=CL:0000738!3.66e-19!140;CL:0002087!2.76e-18!119;CL:0002009!1.77e-17!65;CL:0002057!6.30e-17!42;CL:0000766!2.16e-16!76;CL:0002194!2.62e-16!63;CL:0000576!2.62e-16!63;CL:0000040!2.62e-16!63;CL:0000559!2.62e-16!63;CL:0000860!3.07e-16!45;CL:0000557!6.23e-16!71;CL:0002031!1.18e-15!124;CL:0000839!6.34e-13!70;CL:0000037!6.81e-12!172;CL:0000566!6.81e-12!172;CL:0000988!3.56e-11!182;CL:0002032!4.08e-10!165;CL:0000837!4.08e-10!165;CL:0000763!1.65e-07!112;CL:0000049!1.65e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-13;33!CL:0002057;1.71e-13;33!CL:0000576;4.22e-12;48!CL:0000473;9.27e-12;39!CL:0000234;9.27e-12;39!CL:0000766;2.39e-08;69!CL:0000624;4.40e-07;6!CL:0002087;6.54e-07;104!CL:0000840;7.78e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.19e-27,136;CL:0002087,2.82e-25,115;CL:0000860,2.43e-22,42;CL:0002057,2.43e-22,42;CL:0002009,3.24e-22,61;CL:0002031,6.25e-22,120;CL:0000473,1.40e-21,48;CL:0000234,1.40e-21,48;CL:0002194,1.29e-20,59;CL:0000576,1.29e-20,59;CL:0000040,1.29e-20,59;CL:0000559,1.29e-20,59;CL:0000766,2.55e-20,72;CL:0000557,8.42e-20,67;CL:0000037,2.70e-19,168;CL:0000988,1.20e-17,177;CL:0000839,1.74e-16,66;CL:0002032,2.42e-16,161;CL:0000837,2.42e-16,161;CL:0000763,1.96e-11,108;CL:0000049,1.96e-11,108;CL:0002393,5.50e-08,9;CL:0002397,5.50e-08,9;CL:0000624,4.89e-07,6;CL:0000840,8.41e-07,5;CL:0001029,8.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-11!80;UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0002193!9.58e-11!112;UBERON:0001474!1.02e-10!86;UBERON:0007023!1.96e-10!115;UBERON:0002405!7.06e-09!115;UBERON:0001049!3.51e-08!57;UBERON:0005068!3.51e-08!57;UBERON:0006241!3.51e-08!57;UBERON:0007135!3.51e-08!57;UBERON:0002780!3.61e-08!41;UBERON:0001890!3.61e-08!41;UBERON:0006240!3.61e-08!41;UBERON:0003080!1.51e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.00e-16,76;UBERON:0002405,2.22e-15,93;UBERON:0002390,6.01e-15,98;UBERON:0003061,6.01e-15,98;UBERON:0001474,1.45e-14,82;UBERON:0002193,3.60e-14,108;UBERON:0004765,1.20e-11,90;UBERON:0001434,2.63e-09,100;UBERON:0007023,1.79e-07,114;UBERON:0003081,3.13e-07,203;UBERON:0001049,5.88e-07,56;UBERON:0005068,5.88e-07,56;UBERON:0006241,5.88e-07,56;UBERON:0007135,5.88e-07,56 | |||
|phase1_expression=1.09007027562334,0.428201047781966,1.26858963686374,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,1.14494394852423,0.547497700291537,0.502170558379211,0,0,0,11.0141997517693,11.5148819429164,8.66970290570026,0,0,0,1.78174561334694,1.70603078984906,6.45920966536664,9.97191735357379,5.21415563422368,7.81239134577067,0.895661896959697,0.32389366601898,1.54545340580512,1.89017710413434,1.88937971844405,1.4555043671269,2.78914844286822,1.6446715520873,1.23882548358041,3.45230870786581,4.35473201099471,3.78371567821736,4.48169384957604,3.87290810150296,6.77132432971709,1.88242339542605,1.36453075028923,0.898893937780338,2.75475503133812,2.56743221660875,3.19668562899521,2.30895910130701,3.19141852194611,2.55734850319616,1.7412554317715,0,1.86846674698672,3.26623264833766,2.60741459210101,3.47502151528187,1.81619850790011,1.47311054395026,2.21523671208619,4.01385043992689,3.18906449947565,4.82214884669265,5.72876018847125,4.95583746376971,4.33959084082116,6.84030584978997,2.98375015798635,2.37463399894024,0,2.18455444504853,0,6.40095333849761,1.60158394814405,3.4485146397269,3.30522436392431,1.90810750907073,74.5668989533377,40.5193660665948,55.047344850033,27.7559790015954,10.6496626966492,1.84368859342554,11.6058764367162,23.1876350022007,30.4290218519274,1.17030546773475,49.5401845283057,42.1368547103913,19.4826728407911,0.891283655081389,25.336108042836,22.5964572475294,16.2482318259009,0.768547918354051,0.910415432919148,0,0,0.289803085735052,3.85545064221357,4.81573490561484,3.1360657141493,0,11.1133943144557,11.6833331464094,4.04831507231205,0.637130828648193,0,0,1.35517607169996,0.511946444617674,0,0.710331756132051,1.64225599384209,18.9510338631248,13.3720097891754,9.84805946403033,0,0,1.2786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,2.43317435151318,0.189069634328136,0.443458794925128,0.790513071238134,1.44076983047484,0,0,10.0609692032952,11.6666923990509,6.51494006542439,16.4558530770686,9.15191857248205,11.1437250398869,1.59009925893364,1.72046919021225,0.694281003215189,1.69592382577203,1.25849830862972,1.92582629358047,1.46296476575767,1.03366703667732,1.06729878806013,2.00832367658802,0.402829317109147,2.28081631715554,0.488124115096339,0.367663080345869,0.81014194788176,0.446498641420399,1.79623498100936,1.23872628531654,0,2.84779697870439,2.19842092716489,10.5424333948851,3.87780264148325,0,0,0.379891534993739,0.132409180813219,0,0,0.560677600142307,3.20246987189115,0.49333509683432,0,0.942974704487816,0.490385709340376,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.469737994575059,0,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0.309157587715317,0.515281080091258,0.744467425326359,0.168776332241266,0.68205903612839,0,0.368199594569197,0.323292113637624,0,0.604512589365842,0,0.386521706326594,0.545492241181669,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,1.38134921352481,0,0,1.65629520055781,1.18009283054671,1.44606617930089,0.772057809126758,0.653638332277218,0.474541238222193,1.07865046528132,0.98110732562673,1.15424147083917,0.738155454624648,0,0,0,1.26755034821831,4.91413608338813,4.13552934676983,0,0.245976877086227,0,0.329250856225877,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,1.44331342025273,0.34779121492523,1.29149563659404,0.866198686566443,0.462985512576611,1.14152491340759,0.790204397959275,0,0.738651018262192,3.04205544681009,2.37809859661965,0,0,0,0.268675568108545,0,0,0,0,0.829312462163088,0.288239906833923,0.6312121671319,0.253991577168676,0.763976851116555,0,0,0.205654985406647,0,0.571652865261156,0.224262168690721,0,0.1466765716419,1.16344544182,0,0.845302752556,1.06375246633948,0,0,0,0,1.28680194292333,0,0,0.65147236858747,1.77695974371273,0,0.301439377059586,0,0.599837947092342,3.64871341923571,0.502257091432126,0,0.479249710983165,1.14861935834114,0,1.15825045334063,1.02738161275192,0.716243852959582,1.00876629594175,12.8069994131253,7.54696512008311,9.36904164842163,2.03275699377971,2.60279707715243,3.09315525111078,1.34013012267479,2.55175500661265,0.749007023947182,0,2.07207756718018,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,0.664225598535437,0.737476674166813,0,0,0,9.30456117552993,10.7857100409308,14.7284029768753,0,0,0,1.24053903909388,0.306923946576125,0.561320188866147,1.02511319404561,1.02341449813341,1.60853921143608,0,0.462629081407967,0.177561725313127,0,0.519254429183621,0.116210378459959,0.362578348774867,0.200506470303285,0.276242966807689,0.34444334449382,0.364182336013434,0,0.451199612907412,0.616122696835318,0,0,0.73886140225013,4.54933536283586,1.53084334748864,2.590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| |||
|short_description=p4@SETD7 | |||
}} |
Revision as of 03:12, 22 January 2014
Short description: | p4@SETD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SETD7_5end |
Coexpression cluster: | C3711_CD19_CD4_immature_CD34_CD8_granulocyte_Peripheral |
Association with transcript: | 0bp_to_ENST00000274031_5end |
EntrezGene: | SETD7 |
HGNC: | 30412 |
UniProt: | Q8WTS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.19e-27 | 136 |
nongranular leukocyte | 2.82e-25 | 115 |
classical monocyte | 2.43e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-22 | 42 |
macrophage dendritic cell progenitor | 3.24e-22 | 61 |
hematopoietic lineage restricted progenitor cell | 6.25e-22 | 120 |
defensive cell | 1.40e-21 | 48 |
phagocyte | 1.40e-21 | 48 |
monopoietic cell | 1.29e-20 | 59 |
monocyte | 1.29e-20 | 59 |
monoblast | 1.29e-20 | 59 |
promonocyte | 1.29e-20 | 59 |
myeloid leukocyte | 2.55e-20 | 72 |
granulocyte monocyte progenitor cell | 8.42e-20 | 67 |
hematopoietic stem cell | 2.70e-19 | 168 |
hematopoietic cell | 1.20e-17 | 177 |
myeloid lineage restricted progenitor cell | 1.74e-16 | 66 |
hematopoietic oligopotent progenitor cell | 2.42e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-16 | 161 |
myeloid cell | 1.96e-11 | 108 |
common myeloid progenitor | 1.96e-11 | 108 |
intermediate monocyte | 5.50e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.50e-08 | 9 |
CD4-positive, alpha-beta T cell | 4.89e-07 | 6 |
immature conventional dendritic cell | 8.41e-07 | 5 |
common dendritic progenitor | 8.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.00e-16 | 76 |
immune system | 2.22e-15 | 93 |
hematopoietic system | 6.01e-15 | 98 |
blood island | 6.01e-15 | 98 |
bone element | 1.45e-14 | 82 |
hemolymphoid system | 3.60e-14 | 108 |
skeletal element | 1.20e-11 | 90 |
skeletal system | 2.63e-09 | 100 |
adult organism | 1.79e-07 | 114 |
lateral plate mesoderm | 3.13e-07 | 203 |
neural tube | 5.88e-07 | 56 |
neural rod | 5.88e-07 | 56 |
future spinal cord | 5.88e-07 | 56 |
neural keel | 5.88e-07 | 56 |