FFCP PHASE1:Mm9::chr15:36723987..36724035,-: Difference between revisions
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{{FFCP|EntrezGene=22631|HGNC=|UniProt=P63101|association_with_transcript=250bp_to_ENSMUST00000110361_5end|description=CAGE_peak_2_at_Ywhaz_5end|id=chr15:36723987..36724035,-|ontology_enrichment_celltype=CL:0000393!1.91e-13!39;CL:0000211!1.91e-13!39;CL:0000540!7.85e-13!33;CL:0000047!7.85e-13!33;CL:0000031!7.85e-13!33;CL:0000404!7.85e-13!33;CL:0000055!2.55e-12!50;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0002319!2.95e-12!43;CL:0000117!1.30e-08!23;CL:0000337!1.30e-08!23;CL:0002321!8.10e-08!70;CL:0000220!8.10e-08!70|ontology_enrichment_celltype_v019_2=CL:0000393,1.91e-13,39;CL:0000211,1.91e-13,39;CL:0000540,7.85e-13,33;CL:0000047,7.85e-13,33;CL:0000031,7.85e-13,33;CL:0000404,7.85e-13,33;CL:0000221,2.55e-12,44;CL:0000133,2.55e-12,44;CL:0002319,2.95e-12,43;CL:0000117,1.30e-08,23;CL:0000337,1.30e-08,23;CL:0002321,8.10e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.15e-21!75;UBERON:0001016!2.15e-21!75;UBERON:0001017!5.84e-21!73;UBERON:0005743!5.84e-21!73;UBERON:0004121!5.54e-18!102;UBERON:0000924!5.54e-18!102;UBERON:0006601!5.54e-18!102;UBERON:0002020!1.32e-17!34;UBERON:0002346!3.11e-16!71;UBERON:0003075!3.11e-16!71;UBERON:0007284!3.11e-16!71;UBERON:0002780!8.03e-15!39;UBERON:0001890!8.03e-15!39;UBERON:0006240!8.03e-15!39;UBERON:0002791!8.18e-15!29;UBERON:0003528!8.18e-15!29;UBERON:0001893!8.18e-15!29;UBERON:0001049!9.62e-15!52;UBERON:0005068!9.62e-15!52;UBERON:0006241!9.62e-15!52;UBERON:0007135!9.62e-15!52;UBERON:0003080!3.84e-14!40;UBERON:0003056!7.75e-14!49;UBERON:0000956!9.91e-14!21;UBERON:0001869!9.91e-14!21;UBERON:0000203!9.91e-14!21;UBERON:0000955!4.85e-13!50;UBERON:0006238!4.85e-13!50;UBERON:0002616!1.60e-12!49;UBERON:0000033!1.61e-12!63;UBERON:0002619!1.63e-11!17;UBERON:0002021!4.27e-08!10;UBERON:0000411!4.27e-08!10;UBERON:0001950!4.27e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.15e-21,75;UBERON:0001017,5.84e-21,73;UBERON:0004121,1.21e-17,95;UBERON:0000924,1.21e-17,95;UBERON:0006601,1.21e-17,95;UBERON:0002020,1.32e-17,34;UBERON:0002346,3.17e-16,64;UBERON:0003075,3.17e-16,64;UBERON:0007284,3.17e-16,64;UBERON:0000073,4.02e-15,54;UBERON:0002780,8.03e-15,39;UBERON:0001890,8.03e-15,39;UBERON:0006240,8.03e-15,39;UBERON:0003528,8.18e-15,29;UBERON:0002791,8.18e-15,29;UBERON:0001893,8.18e-15,29;UBERON:0001049,9.62e-15,52;UBERON:0005068,9.62e-15,52;UBERON:0006241,9.62e-15,52;UBERON:0007135,9.62e-15,52;UBERON:0003080,3.84e-14,40;UBERON:0003056,7.75e-14,49;UBERON:0000956,9.91e-14,21;UBERON:0001869,9.91e-14,21;UBERON:0000203,9.91e-14,21;UBERON:0000955,2.76e-13,47;UBERON:0006238,2.76e-13,47;UBERON:0010371,2.90e-13,73;UBERON:0002616,9.31e-13,46;UBERON:0002619,1.63e-11,17;UBERON:0010314,2.01e-11,92;UBERON:0002021,4.27e-08,10;UBERON:0000411,4.27e-08,10;UBERON:0001950,4.27e-08,10|phase1_expression=45.6424214248663,47.8096308465925,65.0648912327037,45.3696316960245,50.0895729946347,34.2473714700255,36.2099592923065,10.2007425518845,9.43284438416167,5.14941957908386,2.91070545983358,2.15384829287408,9.75844160607873,11.2772319120507,12.3250611871795,15.3881203216268,15.3903613188192,20.8205029136437,19.8815928728321,19.5219239827094,34.9527922520897,41.3050356995683,38.6575687925624,48.1577192608154,47.258311899837,61.4428201603072,69.352681381611,60.116473919363,38.0046838912748,27.7233142735924,62.5280040047959,5.71527606113668,5.53558308826113,0,16.1756907060714,12.6338330472454,11.637653306955,10.4632907684227,11.720030167857,13.088093599345,10.5881667845583,12.9778642142105,8.73918635456076,56.9053617249609,54.6421659273183,53.4121048790493,20.342174953049,37.2823017410564,50.0884496634596,49.1907644657937,44.0957228119892,53.1884488150395,25.8385213328914,18.1340535502836,55.4554768585066,38.5889154053921,29.2264108737532,35.0657022748661,82.5451160307159,85.6965386420693,91.905553508396,26.7687180334614,29.3467282716676,11.2487464660175,10.8775299882367,12.0781619540837,22.7696083993988,21.9004434033286,67.087179163585,72.903206699113,67.3039876324422,59.4154047559911,68.4692476950002,76.9242219069911,64.7915384083278,77.2143780752418,26.4278114398533,48.7765631485417,34.2542569161423,108.410528514219,109.968147610096,115.642768263601,18.9844439320939,27.5753678915523,46.2978690763735,80.4336038343113,91.8297341154214,71.5773871969154,39.3776205332557,46.174223225246,26.6675329605544,18.0689014166091,39.4383373550495,16.7307989407723,9.74664626171504,13.8888335000174,20.364440919104,58.4576006442738,44.4234067870906,43.8141072392822,39.1544706979172,24.3820307087204,22.9324715735981,14.2213340630666,26.1954159623569,22.0423082963336,31.8480400359313,32.428221840213,31.3314839213078,36.9620926271414,40.7690517900419,40.4939086155148,37.8209415499936,34.8169299676558,35.6293782621186,32.0449807890672,46.7198489017967,17.0627241165496,19.4614321428972,22.3238252927425,15.6797478106879,16.0008833534623,18.6391761218122,46.552146724836,46.2877222057736,29.8884754594052,51.5205035375457,41.9931911695385,42.0602451611844,23.0677584683427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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22631 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63101 | |||
|association_with_transcript=250bp_to_ENSMUST00000110361_5end | |||
|cluster_id=chr15:36723987..36724035,- | |||
|description=CAGE_peak_2_at_Ywhaz_5end | |||
|id=chr15:36723987..36724035,- | |||
|ontology_enrichment_celltype=CL:0000393!1.91e-13!39;CL:0000211!1.91e-13!39;CL:0000540!7.85e-13!33;CL:0000047!7.85e-13!33;CL:0000031!7.85e-13!33;CL:0000404!7.85e-13!33;CL:0000055!2.55e-12!50;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0002319!2.95e-12!43;CL:0000117!1.30e-08!23;CL:0000337!1.30e-08!23;CL:0002321!8.10e-08!70;CL:0000220!8.10e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.91e-13,39;CL:0000211,1.91e-13,39;CL:0000540,7.85e-13,33;CL:0000047,7.85e-13,33;CL:0000031,7.85e-13,33;CL:0000404,7.85e-13,33;CL:0000221,2.55e-12,44;CL:0000133,2.55e-12,44;CL:0002319,2.95e-12,43;CL:0000117,1.30e-08,23;CL:0000337,1.30e-08,23;CL:0002321,8.10e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-21!75;UBERON:0001016!2.15e-21!75;UBERON:0001017!5.84e-21!73;UBERON:0005743!5.84e-21!73;UBERON:0004121!5.54e-18!102;UBERON:0000924!5.54e-18!102;UBERON:0006601!5.54e-18!102;UBERON:0002020!1.32e-17!34;UBERON:0002346!3.11e-16!71;UBERON:0003075!3.11e-16!71;UBERON:0007284!3.11e-16!71;UBERON:0002780!8.03e-15!39;UBERON:0001890!8.03e-15!39;UBERON:0006240!8.03e-15!39;UBERON:0002791!8.18e-15!29;UBERON:0003528!8.18e-15!29;UBERON:0001893!8.18e-15!29;UBERON:0001049!9.62e-15!52;UBERON:0005068!9.62e-15!52;UBERON:0006241!9.62e-15!52;UBERON:0007135!9.62e-15!52;UBERON:0003080!3.84e-14!40;UBERON:0003056!7.75e-14!49;UBERON:0000956!9.91e-14!21;UBERON:0001869!9.91e-14!21;UBERON:0000203!9.91e-14!21;UBERON:0000955!4.85e-13!50;UBERON:0006238!4.85e-13!50;UBERON:0002616!1.60e-12!49;UBERON:0000033!1.61e-12!63;UBERON:0002619!1.63e-11!17;UBERON:0002021!4.27e-08!10;UBERON:0000411!4.27e-08!10;UBERON:0001950!4.27e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.15e-21,75;UBERON:0001017,5.84e-21,73;UBERON:0004121,1.21e-17,95;UBERON:0000924,1.21e-17,95;UBERON:0006601,1.21e-17,95;UBERON:0002020,1.32e-17,34;UBERON:0002346,3.17e-16,64;UBERON:0003075,3.17e-16,64;UBERON:0007284,3.17e-16,64;UBERON:0000073,4.02e-15,54;UBERON:0002780,8.03e-15,39;UBERON:0001890,8.03e-15,39;UBERON:0006240,8.03e-15,39;UBERON:0003528,8.18e-15,29;UBERON:0002791,8.18e-15,29;UBERON:0001893,8.18e-15,29;UBERON:0001049,9.62e-15,52;UBERON:0005068,9.62e-15,52;UBERON:0006241,9.62e-15,52;UBERON:0007135,9.62e-15,52;UBERON:0003080,3.84e-14,40;UBERON:0003056,7.75e-14,49;UBERON:0000956,9.91e-14,21;UBERON:0001869,9.91e-14,21;UBERON:0000203,9.91e-14,21;UBERON:0000955,2.76e-13,47;UBERON:0006238,2.76e-13,47;UBERON:0010371,2.90e-13,73;UBERON:0002616,9.31e-13,46;UBERON:0002619,1.63e-11,17;UBERON:0010314,2.01e-11,92;UBERON:0002021,4.27e-08,10;UBERON:0000411,4.27e-08,10;UBERON:0001950,4.27e-08,10 | |||
|phase1_expression=45.6424214248663,47.8096308465925,65.0648912327037,45.3696316960245,50.0895729946347,34.2473714700255,36.2099592923065,10.2007425518845,9.43284438416167,5.14941957908386,2.91070545983358,2.15384829287408,9.75844160607873,11.2772319120507,12.3250611871795,15.3881203216268,15.3903613188192,20.8205029136437,19.8815928728321,19.5219239827094,34.9527922520897,41.3050356995683,38.6575687925624,48.1577192608154,47.258311899837,61.4428201603072,69.352681381611,60.116473919363,38.0046838912748,27.7233142735924,62.5280040047959,5.71527606113668,5.53558308826113,0,16.1756907060714,12.6338330472454,11.637653306955,10.4632907684227,11.720030167857,13.088093599345,10.5881667845583,12.9778642142105,8.73918635456076,56.9053617249609,54.6421659273183,53.4121048790493,20.342174953049,37.2823017410564,50.0884496634596,49.1907644657937,44.0957228119892,53.1884488150395,25.8385213328914,18.1340535502836,55.4554768585066,38.5889154053921,29.2264108737532,35.0657022748661,82.5451160307159,85.6965386420693,91.905553508396,26.7687180334614,29.3467282716676,11.2487464660175,10.8775299882367,12.0781619540837,22.7696083993988,21.9004434033286,67.087179163585,72.903206699113,67.3039876324422,59.4154047559911,68.4692476950002,76.9242219069911,64.7915384083278,77.2143780752418,26.4278114398533,48.7765631485417,34.2542569161423,108.410528514219,109.968147610096,115.642768263601,18.9844439320939,27.5753678915523,46.2978690763735,80.4336038343113,91.8297341154214,71.5773871969154,39.3776205332557,46.174223225246,26.6675329605544,18.0689014166091,39.4383373550495,16.7307989407723,9.74664626171504,13.8888335000174,20.364440919104,58.4576006442738,44.4234067870906,43.8141072392822,39.1544706979172,24.3820307087204,22.9324715735981,14.2213340630666,26.1954159623569,22.0423082963336,31.8480400359313,32.428221840213,31.3314839213078,36.9620926271414,40.7690517900419,40.4939086155148,37.8209415499936,34.8169299676558,35.6293782621186,32.0449807890672,46.7198489017967,17.0627241165496,19.4614321428972,22.3238252927425,15.6797478106879,16.0008833534623,18.6391761218122,46.552146724836,46.2877222057736,29.8884754594052,51.5205035375457,41.9931911695385,42.0602451611844,23.0677584683427,53.0700699269607,77.1517721972988,136.625915671129,136.040623299736,45.9211578476628,64.8965052271031,47.8645010096487,21.0247780331057,51.8081654789033,13.6787206326208,35.0023991569673,49.8887566620636,54.5588253310208,40.2381863621359,47.3534034093242,43.3024374562792,41.6972674290793,21.4723797713383,35.1375828480533,34.6064126707109,40.6447096818722,40.3320147666738,34.1998116547485,48.4070511465812,34.3656167801266,31.6464484241404,33.7062329910353,30.3670530395364,32.110475431702,41.4251545071004,26.735970837845,27.5494954035353,39.0628813715597,27.9405209081313,30.8534225774757,26.7414036462969,28.16870714696,26.2722020326131,28.7979737348591,18.879258369096,16.7812435759921,13.7427988179812,18.0031094538662,13.9574675510787,181.480225610842,192.534529761641,36.6764849112016,25.9161555330273,30.2869315760032,29.2618206544153,37.1138288607629,31.6643133658648,32.2448163575062,35.7624177091611,20.404749646414,34.9161784014903,19.3528110776208,21.2883425084031,26.9050440224386,17.9763881730844,20.533114738096,28.0789195288658,61.2627320078454,37.93050618643,51.845558409617,36.4535876843113,30.8384454596525,42.5724426734234,31.6815050992529,25.241335304512,24.0208053597303,33.0704399310425,13.6368208460088,23.1914696945371,19.6558995113203,17.0895205412489,19.6774317746848,21.2235900582127,20.3700681425136,14.0971107350897,17.6727397184789,15.1008777253445,35.9420516318386,23.4448797031157,18.4102227137591,16.9227848224565,12.0196267059681,19.2977408545347,22.1703828199926,40.3616707071133,45.1412984744412,26.6499784667045,34.9688469949868,31.1561638841777,37.6108952599902,31.8067846008212,37.8324345854858,33.8840975162626,41.7771493882616,22.2854108013404,24.866637388689,21.4080606700637,12.0633027151418,16.3171705145613,16.2282210096282,18.4877620024171,22.6376331882787,24.7316658709549,21.9672826804745,10.856249869788,66.5722342968302,59.7371278773857,67.2121000926333,62.6098250635686,58.818849957752,70.7691326972081,51.8157698143865,53.7750778556814,56.9214400242994,72.6186175113284,25.5492153374884,31.5176118491042,32.5773918707152,30.3545026269465,11.9470624505967,27.9197731578229,29.9300321395104,19.8035333743693,25.3959627877465,23.9799415396263,26.6181141963268,23.2661586865604,22.8158322166222,12.3254335594968,12.6502330289999,14.4389760547462,12.9367050186439,38.893196310763,42.0415722293952,47.3684847419819,51.0739872889748,41.9166721364866,39.3272159239069,31.9688196570329,43.1795942837227,38.3416048263514,32.6382029121344,24.5680516882805,31.0011699256139,29.1311427402993,22.0838836405802,20.5176124681327,26.5247561333164,21.8801856372401,14.3531539870196,26.8302928352189,22.7789268664745,17.5182665014363,15.1730592770338,14.4130249120109,60.1723642178248,56.5403867387578,54.1743897313341,21.0027535963325,40.0165031880136,43.1037270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| |||
|short_description=p2@Ywhaz | |||
}} |
Revision as of 05:25, 5 August 2015
Short description: | p2@Ywhaz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ywhaz_5end |
Coexpression cluster: | NA |
Association with transcript: | 250bp_to_ENSMUST00000110361_5end |
EntrezGene: | 22631 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.91e-13 | 39 |
electrically active cell | 1.91e-13 | 39 |
neuron | 7.85e-13 | 33 |
neuronal stem cell | 7.85e-13 | 33 |
neuroblast | 7.85e-13 | 33 |
electrically signaling cell | 7.85e-13 | 33 |
ectodermal cell | 2.55e-12 | 44 |
neurectodermal cell | 2.55e-12 | 44 |
neural cell | 2.95e-12 | 43 |
CNS neuron (sensu Vertebrata) | 1.30e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-08 | 23 |
embryonic cell | 8.10e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.15e-21 | 75 |
central nervous system | 5.84e-21 | 73 |
ectoderm-derived structure | 1.21e-17 | 95 |
ectoderm | 1.21e-17 | 95 |
presumptive ectoderm | 1.21e-17 | 95 |
gray matter | 1.32e-17 | 34 |
neurectoderm | 3.17e-16 | 64 |
neural plate | 3.17e-16 | 64 |
presumptive neural plate | 3.17e-16 | 64 |
regional part of nervous system | 4.02e-15 | 54 |
regional part of forebrain | 8.03e-15 | 39 |
forebrain | 8.03e-15 | 39 |
future forebrain | 8.03e-15 | 39 |
brain grey matter | 8.18e-15 | 29 |
regional part of telencephalon | 8.18e-15 | 29 |
telencephalon | 8.18e-15 | 29 |
neural tube | 9.62e-15 | 52 |
neural rod | 9.62e-15 | 52 |
future spinal cord | 9.62e-15 | 52 |
neural keel | 9.62e-15 | 52 |
anterior neural tube | 3.84e-14 | 40 |
pre-chordal neural plate | 7.75e-14 | 49 |
cerebral cortex | 9.91e-14 | 21 |
cerebral hemisphere | 9.91e-14 | 21 |
pallium | 9.91e-14 | 21 |
brain | 2.76e-13 | 47 |
future brain | 2.76e-13 | 47 |
ecto-epithelium | 2.90e-13 | 73 |
regional part of brain | 9.31e-13 | 46 |
regional part of cerebral cortex | 1.63e-11 | 17 |
structure with developmental contribution from neural crest | 2.01e-11 | 92 |
occipital lobe | 4.27e-08 | 10 |
visual cortex | 4.27e-08 | 10 |
neocortex | 4.27e-08 | 10 |