FFCP PHASE1:Hg19::chr4:72052683..72052716,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |||
|TSSclassifier=weak | |||
|UniProt=Q9Y6R1,A5JJ20 | |||
|association_with_transcript=-286bp_to_ENST00000264485,ENST00000425175,NM_001098484,NM_001134742,uc003hfy.2,uc010iib.2,uc010iic.2_5end | |||
|description=CAGE_peak_8_at_SLC4A4_5end | |||
|id=chr4:72052683..72052716,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;5.97e-08;1!CL:0000511;5.97e-08;1!CL:0002625;5.97e-08;1!CL:0000557;5.97e-08;1!CL:0000216;5.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.05e-08,1;CL:0002625,5.05e-08,1;CL:0000216,5.05e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.95e-10;3!UBERON:0006242;2.35e-08;1!UBERON:0006222;5.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.73e-24!115;UBERON:0001049!8.54e-21!57;UBERON:0005068!8.54e-21!57;UBERON:0006241!8.54e-21!57;UBERON:0007135!8.54e-21!57;UBERON:0003075!1.55e-19!86;UBERON:0007284!1.55e-19!86;UBERON:0002346!9.37e-19!90;UBERON:0002616!4.59e-18!59;UBERON:0005743!4.71e-17!86;UBERON:0001017!7.29e-17!82;UBERON:0000073!1.30e-15!94;UBERON:0001016!1.30e-15!94;UBERON:0000955!2.30e-15!69;UBERON:0006238!2.30e-15!69;UBERON:0002780!2.67e-15!41;UBERON:0001890!2.67e-15!41;UBERON:0006240!2.67e-15!41;UBERON:0002020!6.67e-15!34;UBERON:0003528!6.67e-15!34;UBERON:0003080!1.04e-14!42;UBERON:0001893!4.09e-14!34;UBERON:0002791!1.10e-13!33;UBERON:0003056!8.01e-13!61;UBERON:0001869!9.02e-13!32;UBERON:0001950!4.70e-12!20;UBERON:0002619!4.79e-12!22;UBERON:0000956!3.36e-11!25;UBERON:0000203!3.36e-11!25;UBERON:0000033!3.79e-10!123;UBERON:0000153!3.93e-10!129;UBERON:0007811!3.93e-10!129;UBERON:0000475!4.19e-10!365;UBERON:0004121!5.71e-10!169;UBERON:0000924!8.85e-10!173;UBERON:0006601!8.85e-10!173;UBERON:0000481!1.94e-09!347;UBERON:0000119!1.60e-08!312;UBERON:0000483!2.01e-08!309;UBERON:0003076!2.15e-07!15;UBERON:0003057!2.15e-07!15;UBERON:0000477!2.25e-07!286;UBERON:0000062!6.48e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.35e-08;1!UBERON:0006518;2.35e-08;1!UBERON:0008949;2.35e-08;1!UBERON:0000101;2.35e-08;1!UBERON:0002167;2.35e-08;1!UBERON:0001136;5.97e-08;1!UBERON:0001343;5.97e-08;1!UBERON:0004910;5.97e-08;1!UBERON:0004813;5.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.35e-08,1;UBERON:0006518,2.35e-08,1;UBERON:0008949,2.35e-08,1;UBERON:0000101,2.35e-08,1;UBERON:0002167,2.35e-08,1;UBERON:0001136,5.05e-08,1;UBERON:0001343,5.05e-08,1;UBERON:0004910,5.05e-08,1;UBERON:0005154,5.05e-08,1;UBERON:0005295,5.05e-08,1;UBERON:0004813,5.05e-08,1;UBERON:0005297,5.05e-08,1;UBERON:0005294,5.05e-08,1;UBERON:0010141,5.05e-08,1;UBERON:0005891,5.05e-08,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.662045904066094,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.7308685049499,0,0,0,0,0,0,0.919463387397059,0.45071417671979,0,0.358779271377724,0,0,0.600182192168805,0,0,0,0.675105328965065,0.0974370051611986,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.403008392910561,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,1.7658523976586,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,1.52456774533478,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0,0.965123526861645,0,0,0.177561725313127,0.328508624055237,0,0.464841513839837,0,0,0,0.68888668898764,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0.869932992075073,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.682499557039929,1.83827061539827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,1.90012867315194,0,0.828851746593443,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,4.84666373047609,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,1.10579259931225,0.886642856860642,1.97446857438575,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,3.18447232212021,3.05515072466813,0,0.123563938946503,0.104421949505455,0.202203398942031,0,1.40558667435203,0,0,0,0,0,0.30607276163049,0.884612114798832,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.569797163602908,0,0.240476460754601,2.77488893161158,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.547621515567972,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.403100834920358,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.544813624446302,0,0,0,0,0,0.364497339948148,0,0.472834243795189,0.314727528809989,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.58620893471233,0,0.904980694530854,0.79339561045614,0,0,1.06787412567695,0.628817220398664,2.48543433208317,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,1.90402606084398,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0.6124909547064,0.192687675289379,0,0.638535436228605,1.8460472781668,0.252071696221718,0.553258019713743,0.322951291263702,0,0,0,0,0,1.52552838186867,0,0,0.0752103283492573,0.20170506870352,1.56302802246618,0,0.163771917510097,0,0.135075169236789,0.781078098613847,0.413373593002368,0.507326481551255,0.546974809018219,0,0.992422356778588,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0.339848664884159,0.0657727735628491,0.118193840883968,0,0.706437835654626,0.314231179832004,0,0.913158720509496,0,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0.365753774946808,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,1.92935395269862,0,0,0,0,0.588925401344836,0.297046400327086,2.9585900930838,0.169927114687817,0,0,0,0,0,0,0,0,0.716697915757256,0,0.407948941145488,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.20686599172379,0,0,0.258355639344024,0.372448285775147,0,0.891060215894309,1.41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| |||
|short_description=p8@SLC4A4 | |||
}} |
Revision as of 01:26, 22 January 2014
Short description: | p8@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC4A4_5end |
Coexpression cluster: | NA |
Association with transcript: | -286bp_to_ENST00000264485, ENST00000425175, NM_001098484, NM_001134742, uc003hfy.2, uc010iib.2, uc010iic.2_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | Q9Y6R1A5JJ20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.05e-08 | 1 |
seminiferous tubule epithelial cell | 5.05e-08 | 1 |
Sertoli cell | 5.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.35e-08 | 1 |
right lung lobe | 2.35e-08 | 1 |
lower lobe of lung | 2.35e-08 | 1 |
lobe of lung | 2.35e-08 | 1 |
right lung | 2.35e-08 | 1 |
mesothelium | 5.05e-08 | 1 |
seminiferous tubule of testis | 5.05e-08 | 1 |
epithelium of male gonad | 5.05e-08 | 1 |
epithelial cord | 5.05e-08 | 1 |
sex cord | 5.05e-08 | 1 |
seminiferous tubule epithelium | 5.05e-08 | 1 |
testis sex cord | 5.05e-08 | 1 |
genital ridge | 5.05e-08 | 1 |
primitive sex cord of indifferent gonad | 5.05e-08 | 1 |
coelomic epithelium | 5.05e-08 | 1 |