FFCP PHASE1:Hg19::chr4:72897707..72897731,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4525 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=186bp_to_uc010iig.1_5end | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_1_at_NPFFR2_5end | |||
|id=chr4:72897707..72897731,+ | |||
|ontology_enrichment_celltype=CL:0000075!1.28e-10!27;CL:1000449!4.52e-10!16;CL:1000507!5.04e-10!12;CL:1000494!5.04e-10!12;CL:1000497!1.49e-08!18;CL:0002518!1.49e-08!18;CL:0000148!1.22e-07!10;CL:0000541!1.22e-07!10;CL:0002322!4.81e-07!5;CL:0002681!5.88e-07!13;CL:0002584!5.88e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.11e-14;10!CL:1000507;2.14e-10;10!CL:1000494;2.14e-10;10!CL:0000147;7.81e-10;14!CL:1000449;1.82e-09;15!CL:0002537;2.10e-08;5!CL:1000497;2.84e-08;17!CL:0002518;2.84e-08;17!CL:0000075;2.99e-08;27!CL:0002322;7.88e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.85e-14,10;CL:0000541,7.85e-14,10;CL:1000507,1.99e-10,10;CL:1000494,1.99e-10,10;CL:0000147,1.05e-09,14;CL:1000449,2.07e-09,15;CL:0002537,1.99e-08,5;CL:1000497,3.17e-08,17;CL:0002518,3.17e-08,17;CL:0000075,3.67e-08,27;CL:0002322,7.55e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:201,6.88e-07,6;DOID:0060100,6.88e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.64e-15!115;UBERON:0001869!1.02e-14!32;UBERON:0002020!1.08e-14!34;UBERON:0003528!1.08e-14!34;UBERON:0003075!1.15e-14!86;UBERON:0007284!1.15e-14!86;UBERON:0002346!1.71e-14!90;UBERON:0001950!1.73e-14!20;UBERON:0002619!2.25e-14!22;UBERON:0000073!7.33e-14!94;UBERON:0001016!7.33e-14!94;UBERON:0000924!1.05e-13!173;UBERON:0006601!1.05e-13!173;UBERON:0004121!1.15e-13!169;UBERON:0001893!1.91e-13!34;UBERON:0001017!3.38e-13!82;UBERON:0003056!3.40e-13!61;UBERON:0002780!5.32e-13!41;UBERON:0001890!5.32e-13!41;UBERON:0006240!5.32e-13!41;UBERON:0005743!6.05e-13!86;UBERON:0003080!1.65e-12!42;UBERON:0002791!1.66e-12!33;UBERON:0001049!2.29e-12!57;UBERON:0005068!2.29e-12!57;UBERON:0006241!2.29e-12!57;UBERON:0007135!2.29e-12!57;UBERON:0000956!4.91e-12!25;UBERON:0000203!4.91e-12!25;UBERON:0003887!8.56e-12!21;UBERON:0000064!1.21e-11!219;UBERON:0000080!1.24e-11!18;UBERON:0002120!1.24e-11!18;UBERON:0004875!1.24e-11!18;UBERON:0005721!1.24e-11!18;UBERON:0005754!1.24e-11!18;UBERON:0007297!1.24e-11!18;UBERON:0006555!1.13e-10!17;UBERON:0005103!1.13e-10!17;UBERON:0000083!1.13e-10!17;UBERON:0009201!1.13e-10!17;UBERON:0004819!1.13e-10!17;UBERON:0006553!1.13e-10!17;UBERON:0003074!1.13e-10!17;UBERON:0003060!1.13e-10!17;UBERON:0002616!1.17e-10!59;UBERON:0000153!1.61e-10!129;UBERON:0007811!1.61e-10!129;UBERON:0004211!4.52e-10!16;UBERON:0001285!4.52e-10!16;UBERON:0007684!4.52e-10!16;UBERON:0003220!4.52e-10!16;UBERON:0004208!4.52e-10!16;UBERON:0004876!4.91e-10!20;UBERON:0009773!5.04e-10!12;UBERON:0001231!5.04e-10!12;UBERON:0004810!5.04e-10!12;UBERON:0000033!2.23e-09!123;UBERON:0000955!2.46e-09!69;UBERON:0006238!2.46e-09!69;UBERON:0000489!2.70e-08!32;UBERON:0002113!2.77e-08!27;UBERON:0003918!2.77e-08!27;UBERON:0005095!2.77e-08!27;UBERON:0007687!2.77e-08!27;UBERON:0001851!8.06e-08!16;UBERON:0000200!9.78e-08!6;UBERON:0000922!2.06e-07!612;UBERON:0001225!5.88e-07!13;UBERON:0008987!5.88e-07!13;UBERON:0000058!8.80e-07!26;UBERON:0003064!9.58e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.86e-11;20!UBERON:0004211;2.14e-10;10!UBERON:0009773;2.14e-10;10!UBERON:0001231;2.14e-10;10!UBERON:0004810;2.14e-10;10!UBERON:0001869;2.92e-10;32!UBERON:0002370;6.53e-10;2!UBERON:0005058;6.53e-10;2!UBERON:0009113;6.53e-10;2!UBERON:0002619;7.83e-10;22!UBERON:0006555;1.82e-09;15!UBERON:0004819;1.82e-09;15!UBERON:0001285;1.82e-09;15!UBERON:0007684;1.82e-09;15!UBERON:0001893;1.15e-08;34!UBERON:0000956;1.49e-08;25!UBERON:0000203;1.49e-08;25!UBERON:0002791;3.16e-08;32!UBERON:0003528;5.35e-07;34!UBERON:0002020;5.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.27e-11,20;UBERON:0004810,1.99e-10,10;UBERON:0001869,3.21e-10,32;UBERON:0002619,6.17e-10,22;UBERON:0001893,1.57e-09,34;UBERON:0004211,2.07e-09,15;UBERON:0009773,2.07e-09,15;UBERON:0001231,2.07e-09,15;UBERON:0001285,2.07e-09,15;UBERON:0007684,2.07e-09,15;UBERON:0004208,2.07e-09,15;UBERON:0005253,3.12e-09,2;UBERON:0006555,8.81e-09,16;UBERON:0004819,8.81e-09,16;UBERON:0000956,1.21e-08,25;UBERON:0000203,1.21e-08,25;UBERON:0002791,2.97e-08,32;UBERON:0003528,1.08e-07,34;UBERON:0002020,1.08e-07,34;UBERON:0002780,1.23e-07,41;UBERON:0001890,1.23e-07,41;UBERON:0003080,1.23e-07,41;UBERON:0006240,1.23e-07,41;UBERON:0005631,3.48e-07,14;UBERON:0000158,3.48e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.527533956456907,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,1.16193942869518,1.45125477021519,2.52320850875628,2.18986415445498,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,1.14596527667483,1.17217447210047,0,0.411309970813294,0,2.00078502841405,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25599806453706,3.31165949548983,0.784349769176855,2.92278449306521,3.4832037534649,1.13733384070897,0.340187410553031,0,0,0,0.501689773854853,1.27438136522519,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0,0,4.53614521001611,2.67268212749375,3.37876772309155,0.994147647766298,1.54736358051564,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.87754158861589,0,0,0,0,0.46112780877612,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,8.91386879584153,0.90392296312213,0.274083849293502,1.58971689362392,1.01297273529406,1.17330829640882,0.64127056201227,0.213452994739353,0,0,0,4.11827994868715,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0.408610218334727,0.160753148465019,1.10031549277787,0.83088067605837,0,0,1.15424157650247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,3.54427271986794,0.976210119215705,0.500763722825999,0,0.221858103073705,0.18628920882415,0,0,0,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0,0.537052785212442,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0.127894371303652,0,23.7471572202404,0.436838552768056,0,0,0,0.558644917973244,0,0,0,1.41070377476274,1.8374728641192,1.22035527683273,1.41696576325585,0.478901577171454,1.8460472781668,0,0.760729777106397,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.2832141077495,1.56215619722769,1.2401207790071,0.253663240775627,0,0,0,3.51742488719241,0,0,0,0,0.227662191351298,1.1531308121143,0,0,0.135939465953663,0.72350050919134,0,0,0.78493092850514,0.157115589916002,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0.846774100381858,7.10231292486555,1.24082554265728,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0.543931921527318,0.436350690340377,0,0,0,0,0.252332849670158,0.218531143927391,0,0.203977659483963,0,0,0,0.227336094654718,0,0,0.103432995861895,0,1.42838658878244,4.2628680491764,4.2831552864142,0.33639558774184,0.381882949668989,0.202117188958219,0,0.342233301085281,0,0.358611026963382,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0,0,1.20764276154616,0 | |||
|short_description=p1@NPFFR2 | |||
}} |
Revision as of 01:27, 22 January 2014
Short description: | p1@NPFFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPFFR2_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 186bp_to_uc010iig.1_5end |
EntrezGene: | NPFFR2 |
HGNC: | 4525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.85e-14 | 10 |
melanoblast | 7.85e-14 | 10 |
kidney tubule cell | 1.99e-10 | 10 |
nephron tubule epithelial cell | 1.99e-10 | 10 |
pigment cell | 1.05e-09 | 14 |
epithelial cell of nephron | 2.07e-09 | 15 |
amnion mesenchymal stem cell | 1.99e-08 | 5 |
kidney cell | 3.17e-08 | 17 |
kidney epithelial cell | 3.17e-08 | 17 |
columnar/cuboidal epithelial cell | 3.67e-08 | 27 |
embryonic stem cell | 7.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.27e-11 | 20 |
nephron tubule epithelium | 1.99e-10 | 10 |
cerebral hemisphere | 3.21e-10 | 32 |
regional part of cerebral cortex | 6.17e-10 | 22 |
telencephalon | 1.57e-09 | 34 |
nephron epithelium | 2.07e-09 | 15 |
renal tubule | 2.07e-09 | 15 |
nephron tubule | 2.07e-09 | 15 |
nephron | 2.07e-09 | 15 |
uriniferous tubule | 2.07e-09 | 15 |
nephrogenic mesenchyme | 2.07e-09 | 15 |
head mesenchyme | 3.12e-09 | 2 |
excretory tube | 8.81e-09 | 16 |
kidney epithelium | 8.81e-09 | 16 |
cerebral cortex | 1.21e-08 | 25 |
pallium | 1.21e-08 | 25 |
regional part of telencephalon | 2.97e-08 | 32 |
brain grey matter | 1.08e-07 | 34 |
gray matter | 1.08e-07 | 34 |
regional part of forebrain | 1.23e-07 | 41 |
forebrain | 1.23e-07 | 41 |
anterior neural tube | 1.23e-07 | 41 |
future forebrain | 1.23e-07 | 41 |
extraembryonic membrane | 3.48e-07 | 14 |
membranous layer | 3.48e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 6.88e-07 | 6 |
musculoskeletal system cancer | 6.88e-07 | 6 |