FFCP PHASE1:Mm9::chr16:28929744..28929784,-: Difference between revisions
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{{FFCP|EntrezGene=239796|HGNC=|UniProt=D3Z742|association_with_transcript=0bp_to_ENSMUST00000100023,NM_177718,uc007yvv.1_5end|description=CAGE_peak_2_at_1600021P15Rik_5end|id=chr16:28929744..28929784,-|ontology_enrichment_celltype=CL:0000540!1.06e-08!33;CL:0000047!1.06e-08!33;CL:0000031!1.06e-08!33;CL:0000404!1.06e-08!33;CL:0000221!1.38e-07!44;CL:0000133!1.38e-07!44;CL:0002319!3.45e-07!43;CL:0000393!3.98e-07!39;CL:0000211!3.98e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.96e-08,33;CL:0000047,1.96e-08,33;CL:0000031,1.96e-08,33;CL:0000404,1.96e-08,33;CL:0000221,3.81e-07,44;CL:0000133,3.81e-07,44;CL:0000393,6.63e-07,39;CL:0000211,6.63e-07,39;CL:0002319,9.37e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.76e-13!75;UBERON:0001016!4.76e-13!75;UBERON:0001017!5.72e-13!73;UBERON:0005743!5.72e-13!73;UBERON:0004121!1.92e-12!102;UBERON:0000924!1.92e-12!102;UBERON:0006601!1.92e-12!102;UBERON:0002346!5.03e-09!71;UBERON:0003075!5.03e-09!71;UBERON:0007284!5.03e-09!71;UBERON:0001049!7.98e-08!52;UBERON:0005068!7.98e-08!52;UBERON:0006241!7.98e-08!52;UBERON:0007135!7.98e-08!52;UBERON:0002616!5.12e-07!49;UBERON:0000955!9.87e-07!50;UBERON:0006238!9.87e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.33e-12,75;UBERON:0001017,1.61e-12,73;UBERON:0004121,1.46e-11,95;UBERON:0000924,1.46e-11,95;UBERON:0006601,1.46e-11,95;UBERON:0000073,1.14e-08,54;UBERON:0002346,2.28e-08,64;UBERON:0003075,2.28e-08,64;UBERON:0007284,2.28e-08,64;UBERON:0010371,6.71e-08,73;UBERON:0001049,1.57e-07,52;UBERON:0005068,1.57e-07,52;UBERON:0006241,1.57e-07,52;UBERON:0007135,1.57e-07,52|phase1_expression=3.36312578920067,12.9120900826564,9.55498402718026,19.9626379462508,22.0394121176393,4.53274034162102,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,4.15980299262857,5.27641346454491,10.9104073181854,5.1691439539089,7.75696437669201,20.332505881832,11.3413558391969,5.09980174507201,0,0,0,2.02196133825892,1.16364251750945,0.612508068787107,0,0,0,0,0,0,1.6366586336825,1.52065396829272,2.9367480345869,0.782391344348039,4.57852828398938,2.19686182734472,2.91644848611425,1.81982348112971,1.43752564364972,0,0,0,2.82985379639542,1.14613375975503,2.06268836910977,6.47412674750713,3.70293685490423,5.07065122804943,2.37191172448392,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,0.898800331555214,4.2264013585371,1.03689612308478,0.945041568321835,2.73422449756797,8.85518051651791,10.3808214247258,2.32732518508413,1.34183659425531,0.919218786610021,3.30347642998166,7.40586560894089,5.22262213071228,6.06676923558892,6.22115976496386,3.12548022334056,5.02529398202486,2.8138130501584,4.73674568108111,6.77645746589436,6.12198227436143,4.10078780815661,2.65041676666144,3.09843396437821,5.2175607966302,6.0229671388697,6.79971333707751,7.01614149129162,3.89865850468601,5.82434953226536,5.61777680527007,3.91989741929533,3.63700406444016,3.18005617059306,6.4787973097273,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,10.5049169341535,0.258937883647172,1.7813056687779,4.3371331691534,2.13125834818499,4.38169444786511,4.6724018571313,3.99801604261396,1.50799909595611,12.1125534189843,0.578397427679647,0,1.61766849947409,0.441683036920787,1.45462575940567,1.86391761218122,4.39171195517321,2.09446706813455,3.57639877292028,0.11981512450592,0,0,2.39665023047716,1.83000241127451,3.39266750704734,6.60532416730651,5.62574006126727,3.74018480207208,3.40706652442291,2.54598409625791,0.746441823660558,2.77995034277042,1.05220927943237,3.77349284591841,3.44853156650209,1.80062129805349,3.16480117455002,3.6739709541717,2.3060469651273,2.34254311399322,2.32833033665114,2.15567992932842,2.08016688184601,2.81521798662318,1.53437012699302,2.78047249225598,2.089512999133,3.2925141825271,2.7864797354589,0,0,0,2.27838349789052,1.40715635988658,2.52086886045421,1.42046841351126,0.983821158737019,1.69693824176116,1.16266972375204,0.804820204198858,1.63471479314037,1.97471819896177,1.31333971263276,1.54030738137126,0.877199924551994,1.53685080703735,0.671032093801859,1.47202963994889,3.19004298375782,6.27795687669216,3.17340679996253,5.75878276445132,3.25131340604614,3.8660238396628,2.42020229548011,3.55804870151792,2.66315876557583,5.21981967698963,3.62337700392824,3.2673577144035,3.97912944082302,4.48417400373976,2.69645822596266,1.51296634912286,4.18196673834171,4.1726938209678,2.39921876480431,3.38123207019241,2.64746726198909,2.52138233317913,2.59502533594179,2.52946148497029,4.42830443938806,3.29697328466887,4.19550357334122,7.70776830426587,2.00214126859313,1.37591296579242,0.674586337154561,0.811440485554012,1.20588579876208,1.78238096246994,1.43848068725405,1.45921704097532,3.84385978463314,5.75072826109418,2.23284568601102,1.87222603868736,2.27320990152401,3.94674309748207,4.82443521363367,2.21703828199926,2.84237117655727,4.4000543639347,4.58311731593008,4.22442446919304,3.85264392116176,1.42826184531608,2.34160377429359,1.26108115284953,2.21464689648775,3.50800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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:239796 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z742 | |||
|association_with_transcript=0bp_to_ENSMUST00000100023,NM_177718,uc007yvv.1_5end | |||
|cluster_id=chr16:28929744..28929784,- | |||
|description=CAGE_peak_2_at_1600021P15Rik_5end | |||
|id=chr16:28929744..28929784,- | |||
|ontology_enrichment_celltype=CL:0000540!1.06e-08!33;CL:0000047!1.06e-08!33;CL:0000031!1.06e-08!33;CL:0000404!1.06e-08!33;CL:0000221!1.38e-07!44;CL:0000133!1.38e-07!44;CL:0002319!3.45e-07!43;CL:0000393!3.98e-07!39;CL:0000211!3.98e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.96e-08,33;CL:0000047,1.96e-08,33;CL:0000031,1.96e-08,33;CL:0000404,1.96e-08,33;CL:0000221,3.81e-07,44;CL:0000133,3.81e-07,44;CL:0000393,6.63e-07,39;CL:0000211,6.63e-07,39;CL:0002319,9.37e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.76e-13!75;UBERON:0001016!4.76e-13!75;UBERON:0001017!5.72e-13!73;UBERON:0005743!5.72e-13!73;UBERON:0004121!1.92e-12!102;UBERON:0000924!1.92e-12!102;UBERON:0006601!1.92e-12!102;UBERON:0002346!5.03e-09!71;UBERON:0003075!5.03e-09!71;UBERON:0007284!5.03e-09!71;UBERON:0001049!7.98e-08!52;UBERON:0005068!7.98e-08!52;UBERON:0006241!7.98e-08!52;UBERON:0007135!7.98e-08!52;UBERON:0002616!5.12e-07!49;UBERON:0000955!9.87e-07!50;UBERON:0006238!9.87e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.33e-12,75;UBERON:0001017,1.61e-12,73;UBERON:0004121,1.46e-11,95;UBERON:0000924,1.46e-11,95;UBERON:0006601,1.46e-11,95;UBERON:0000073,1.14e-08,54;UBERON:0002346,2.28e-08,64;UBERON:0003075,2.28e-08,64;UBERON:0007284,2.28e-08,64;UBERON:0010371,6.71e-08,73;UBERON:0001049,1.57e-07,52;UBERON:0005068,1.57e-07,52;UBERON:0006241,1.57e-07,52;UBERON:0007135,1.57e-07,52 | |||
|phase1_expression=3.36312578920067,12.9120900826564,9.55498402718026,19.9626379462508,22.0394121176393,4.53274034162102,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,4.15980299262857,5.27641346454491,10.9104073181854,5.1691439539089,7.75696437669201,20.332505881832,11.3413558391969,5.09980174507201,0,0,0,2.02196133825892,1.16364251750945,0.612508068787107,0,0,0,0,0,0,1.6366586336825,1.52065396829272,2.9367480345869,0.782391344348039,4.57852828398938,2.19686182734472,2.91644848611425,1.81982348112971,1.43752564364972,0,0,0,2.82985379639542,1.14613375975503,2.06268836910977,6.47412674750713,3.70293685490423,5.07065122804943,2.37191172448392,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,0.898800331555214,4.2264013585371,1.03689612308478,0.945041568321835,2.73422449756797,8.85518051651791,10.3808214247258,2.32732518508413,1.34183659425531,0.919218786610021,3.30347642998166,7.40586560894089,5.22262213071228,6.06676923558892,6.22115976496386,3.12548022334056,5.02529398202486,2.8138130501584,4.73674568108111,6.77645746589436,6.12198227436143,4.10078780815661,2.65041676666144,3.09843396437821,5.2175607966302,6.0229671388697,6.79971333707751,7.01614149129162,3.89865850468601,5.82434953226536,5.61777680527007,3.91989741929533,3.63700406444016,3.18005617059306,6.4787973097273,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,10.5049169341535,0.258937883647172,1.7813056687779,4.3371331691534,2.13125834818499,4.38169444786511,4.6724018571313,3.99801604261396,1.50799909595611,12.1125534189843,0.578397427679647,0,1.61766849947409,0.441683036920787,1.45462575940567,1.86391761218122,4.39171195517321,2.09446706813455,3.57639877292028,0.11981512450592,0,0,2.39665023047716,1.83000241127451,3.39266750704734,6.60532416730651,5.62574006126727,3.74018480207208,3.40706652442291,2.54598409625791,0.746441823660558,2.77995034277042,1.05220927943237,3.77349284591841,3.44853156650209,1.80062129805349,3.16480117455002,3.6739709541717,2.3060469651273,2.34254311399322,2.32833033665114,2.15567992932842,2.08016688184601,2.81521798662318,1.53437012699302,2.78047249225598,2.089512999133,3.2925141825271,2.7864797354589,0,0,0,2.27838349789052,1.40715635988658,2.52086886045421,1.42046841351126,0.983821158737019,1.69693824176116,1.16266972375204,0.804820204198858,1.63471479314037,1.97471819896177,1.31333971263276,1.54030738137126,0.877199924551994,1.53685080703735,0.671032093801859,1.47202963994889,3.19004298375782,6.27795687669216,3.17340679996253,5.75878276445132,3.25131340604614,3.8660238396628,2.42020229548011,3.55804870151792,2.66315876557583,5.21981967698963,3.62337700392824,3.2673577144035,3.97912944082302,4.48417400373976,2.69645822596266,1.51296634912286,4.18196673834171,4.1726938209678,2.39921876480431,3.38123207019241,2.64746726198909,2.52138233317913,2.59502533594179,2.52946148497029,4.42830443938806,3.29697328466887,4.19550357334122,7.70776830426587,2.00214126859313,1.37591296579242,0.674586337154561,0.811440485554012,1.20588579876208,1.78238096246994,1.43848068725405,1.45921704097532,3.84385978463314,5.75072826109418,2.23284568601102,1.87222603868736,2.27320990152401,3.94674309748207,4.82443521363367,2.21703828199926,2.84237117655727,4.4000543639347,4.58311731593008,4.22442446919304,3.85264392116176,1.42826184531608,2.34160377429359,1.26108115284953,2.21464689648775,3.50800491046472,1.63863314715738,2.93564469172023,2.16973587872267,4.52373851817817,0.54390568381871,0,0.827810238914197,3.37156238974363,2.22702204525186,6.39346286969034,0.757412781613119,5.99465616890888,7.02789739733949,8.18608911384636,10.0366895140072,10.2487390077901,13.0215204162863,8.90583543684768,8.18316402151673,9.48690667071656,1.60660658210904,2.41298144854057,3.5613120733451,2.28041743095006,1.48473110675282,0,2.18502572539483,2.41858845571801,1.13163047853539,0.885905678642318,1.84461088766356,2.06742634534577,1.45413491791002,2.13898427030833,1.26414703174326,1.05418608574999,0,12.2558258071364,4.14140516272013,2.97524972700335,2.57204442037911,3.19212420556092,3.38900753443934,4.60737257685939,5.78483403317739,5.86679270159276,3.81297727554876,1.10264199027481,2.4732937941222,3.06782410722221,2.41251699712623,2.74556391207214,2.79039529566604,0.874442509889552,1.8542530201051,0.512612642393558,1.44470807574256,2.03713980106683,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0.69975726161829,1.10559979043539,3.81868247206045,3.79603192297362,3.86306987541013,1.62008011232702,3.55450103224597,1.9652630737156,2.83215127408124,3.2234847732881,2.09404753587224,0.518459893167171,0,0,4.9340460194513,3.47462829959905,3.69457257853691,2.97067593998782,2.53434188236167,2.69921648885234,2.604087696879,2.20204623293993,0.724752362478018,0.288030006257865,0,2.22997736819181,2.15693010046137,0.649604114888975,0.358053391334963,0.39736270956253,0.240390899039938,0.590758108698309,0.302899349844443,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0,2.72076460338254,3.55177525398503,4.4856928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| |||
|short_description=p2@1600021P15Rik | |||
}} |
Revision as of 06:37, 6 August 2015
Short description: | p2@1600021P15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_1600021P15Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000100023, NM_177718, uc007yvv.1_5end |
EntrezGene: | 239796 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.96e-08 | 33 |
neuronal stem cell | 1.96e-08 | 33 |
neuroblast | 1.96e-08 | 33 |
electrically signaling cell | 1.96e-08 | 33 |
ectodermal cell | 3.81e-07 | 44 |
neurectodermal cell | 3.81e-07 | 44 |
electrically responsive cell | 6.63e-07 | 39 |
electrically active cell | 6.63e-07 | 39 |
neural cell | 9.37e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.33e-12 | 75 |
central nervous system | 1.61e-12 | 73 |
ectoderm-derived structure | 1.46e-11 | 95 |
ectoderm | 1.46e-11 | 95 |
presumptive ectoderm | 1.46e-11 | 95 |
regional part of nervous system | 1.14e-08 | 54 |
neurectoderm | 2.28e-08 | 64 |
neural plate | 2.28e-08 | 64 |
presumptive neural plate | 2.28e-08 | 64 |
ecto-epithelium | 6.71e-08 | 73 |
neural tube | 1.57e-07 | 52 |
neural rod | 1.57e-07 | 52 |
future spinal cord | 1.57e-07 | 52 |
neural keel | 1.57e-07 | 52 |