FFCP PHASE1:Hg19::chr5:125759509..125759522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C423 | |||
|description=CAGE_peak_at_chr5:125759509..125759522,+ | |||
|id=chr5:125759509..125759522,+ | |||
|ontology_enrichment_celltype=CL:0002620!7.66e-16!23;CL:0000057!6.67e-15!75;CL:0000136!2.58e-10!15;CL:0002580!2.30e-09!3;CL:0002579!3.34e-09!3;CL:0002615!6.12e-09!3;CL:0002334!5.84e-08!12;CL:0000197!3.11e-07!6;CL:0000098!3.11e-07!6;CL:0002167!3.11e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.26e-32;3!CL:0002579;4.31e-32;3!CL:0002334;2.32e-31;12!CL:0002615;7.52e-15;3!CL:0002559;2.79e-09;5!CL:0000136;8.89e-08;13!CL:0002620;1.51e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,8.26e-33,3;CL:0002579,3.69e-32,3;CL:0002334,1.74e-31,12;CL:0000057,2.87e-15,76;CL:0002615,8.67e-15,3;CL:0000136,2.44e-11,15;CL:0002559,2.80e-09,5;CL:0002620,1.64e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.88e-13!5;DOID:450!7.88e-13!5;DOID:66!7.88e-13!5;DOID:423!7.88e-13!5;DOID:0080000!7.88e-13!5;DOID:11722!7.88e-13!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.92e-16!6;UBERON:0002358!1.92e-16!6;UBERON:0003684!1.92e-16!6;UBERON:0001178!1.92e-16!6;UBERON:0002097!7.83e-11!40;UBERON:0004457!4.70e-10!12;UBERON:0000042!4.70e-10!12;UBERON:0002199!3.23e-09!45;UBERON:0002416!3.23e-09!45;UBERON:0000310!3.46e-09!10;UBERON:0001443!2.84e-08!11;UBERON:0000475!8.64e-08!365;UBERON:0004923!1.46e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.26e-43;6!UBERON:0002358;2.26e-43;6!UBERON:0003684;2.26e-43;6!UBERON:0001178;2.26e-43;6!UBERON:0004457;5.95e-29;9!UBERON:0000042;5.95e-29;9!UBERON:0000310;3.00e-17;10!UBERON:0001443;1.05e-15;11!UBERON:0002073;2.79e-09;5!UBERON:0002097;5.33e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.37e-43,6;UBERON:0002358,2.37e-43,6;UBERON:0003684,2.37e-43,6;UBERON:0001178,2.37e-43,6;UBERON:0004457,1.03e-21,12;UBERON:0000042,1.03e-21,12;UBERON:0000310,1.93e-17,10;UBERON:0001443,7.02e-16,11;UBERON:0002073,2.80e-09,5;UBERON:0005086,2.80e-09,5;UBERON:0002097,8.61e-09,41;UBERON:0002199,8.63e-08,46;UBERON:0002416,8.63e-08,46;UBERON:0004923,3.94e-07,66 | |||
|phase1_expression=1.99846217197612,0.642301571672949,1.69145284915165,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17782033951725,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0.427114777637135,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,4.21940830603166,1.46155507741798,0.504867548488229,0.0920498986422993,1.2931684545505,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.60586089917446,0.946214490203608,0.937131319941706,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,2.48107807818777,20.1035185007362,1.68396056659844,1.92208723883551,2.04682899626681,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.449947783103001,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:125759509..125759522,+ | |||
}} |
Revision as of 07:09, 22 January 2014
Short description: | p@chr5:125759509..125759522, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:125759509..125759522, + |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 8.26e-33 | 3 |
omentum preadipocyte | 3.69e-32 | 3 |
preadipocyte | 1.74e-31 | 12 |
fibroblast | 2.87e-15 | 76 |
adipocyte of omentum tissue | 8.67e-15 | 3 |
fat cell | 2.44e-11 | 15 |
hair follicle cell | 2.80e-09 | 5 |
skin fibroblast | 1.64e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.37e-43 | 6 |
peritoneum | 2.37e-43 | 6 |
abdominal cavity | 2.37e-43 | 6 |
visceral peritoneum | 2.37e-43 | 6 |
cavity lining | 1.03e-21 | 12 |
serous membrane | 1.03e-21 | 12 |
breast | 1.93e-17 | 10 |
chest | 7.02e-16 | 11 |
hair follicle | 2.80e-09 | 5 |
hair follicle placode | 2.80e-09 | 5 |
skin of body | 8.61e-09 | 41 |
integument | 8.63e-08 | 46 |
integumental system | 8.63e-08 | 46 |
organ component layer | 3.94e-07 | 66 |