FFCP PHASE1:Hg19::chr5:126112794..126112928,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |||
|TSSclassifier=strong | |||
|UniProt=P20700,E9PBF6,B4DZT3 | |||
|association_with_transcript=0bp_to_ENST00000261366,ENST00000395354,ENST00000472034,ENST00000492190,ENST00000504788,NM_001198557,uc003kuc.2,uc003kud.1,uc010jdb.1,uc011cxb.1_5end | |||
|description=CAGE_peak_1_at_LMNB1_5end | |||
|id=chr5:126112794..126112928,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.58e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.29e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.58e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.07e-37!235;DOID:14566!1.51e-34!239;DOID:2531!1.07e-23!51;DOID:0060083!1.07e-23!51;DOID:1240!1.67e-19!39;DOID:0050686!1.62e-18!137;DOID:0050687!1.04e-17!143;DOID:8692!4.74e-15!31;DOID:305!6.24e-14!106;DOID:3095!5.74e-07!22;DOID:2994!5.74e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.26e-15;39!DOID:8692;1.09e-14;31!DOID:2531;1.32e-14;51!DOID:0060083;1.32e-14;51!DOID:3095;5.74e-07;22!DOID:2994;5.74e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.06e-37,235;DOID:14566,1.51e-34,239;DOID:2531,1.07e-23,51;DOID:0060083,1.07e-23,51;DOID:1240,1.67e-19,39;DOID:0050686,1.62e-18,137;DOID:0050687,1.04e-17,143;DOID:8692,4.74e-15,31;DOID:305,6.24e-14,106;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@LMNB1 | |||
}} |
Revision as of 07:10, 22 January 2014
Short description: | p1@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LMNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261366, ENST00000395354, ENST00000472034, ENST00000492190, ENST00000504788, NM_001198557, uc003kuc.2, uc003kud.1, uc010jdb.1, uc011cxb.1_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | P20700E9PBF6B4DZT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.58e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.06e-37 | 235 |
disease of cellular proliferation | 1.51e-34 | 239 |
hematologic cancer | 1.07e-23 | 51 |
immune system cancer | 1.07e-23 | 51 |
leukemia | 1.67e-19 | 39 |
organ system cancer | 1.62e-18 | 137 |
cell type cancer | 1.04e-17 | 143 |
myeloid leukemia | 4.74e-15 | 31 |
carcinoma | 6.24e-14 | 106 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |