FFCP PHASE1:Hg19::chr5:131562742..131562757,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8974 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8547 | |||
|TSSclassifier=weak | |||
|UniProt=O15460 | |||
|association_with_transcript=177bp_to_ENST00000379100,ENST00000379104,NM_001017973,NM_004199,uc003kwg.2,uc003kwh.2_5end | |||
|description=CAGE_peak_10_at_P4HA2_5end | |||
|id=chr5:131562742..131562757,- | |||
|ontology_enrichment_celltype=CL:0000055!3.44e-11!180;CL:0000057!7.45e-09!75;CL:0002570!8.38e-08!8;CL:0002334!9.23e-08!12;CL:0000723!1.10e-07!436;CL:0000048!1.11e-07!430;CL:0000499!2.33e-07!27;CL:0000034!3.48e-07!444;CL:0000569!4.16e-07!4;CL:0000011!4.16e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002616;1.01e-11;1!CL:1000306;2.49e-11;4!CL:0002547;2.49e-11;4!CL:0000188;2.55e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,6.26e-12,1;CL:0000188,2.60e-11,9;CL:1000306,3.41e-11,4;CL:0002547,3.41e-11,4;CL:0000680,2.72e-08,58;CL:0000056,2.72e-08,58;CL:0000355,2.72e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000355;8.99e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!1.94e-07!4;UBERON:0001013!3.14e-07!14;UBERON:0002119!8.47e-07!4;UBERON:0004531!8.47e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.49e-11;4!UBERON:0000415;2.49e-11;4!UBERON:0007240;2.49e-11;4!UBERON:0005742;2.49e-11;4!UBERON:0005734;2.49e-11;4!UBERON:0004664;2.49e-11;4!UBERON:0004663;2.49e-11;4!UBERON:0001134;7.07e-11;16!UBERON:0002036;7.07e-11;16!UBERON:0002385;7.31e-08;31!UBERON:0001015;7.31e-08;31!UBERON:0000383;7.31e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.41e-11,4;UBERON:0007240,3.41e-11,4;UBERON:0005742,3.41e-11,4;UBERON:0005734,3.41e-11,4;UBERON:0004664,3.41e-11,4;UBERON:0004663,3.41e-11,4;UBERON:0001134,1.03e-07,62;UBERON:0002036,1.03e-07,62;UBERON:0003082,1.03e-07,62;UBERON:0002385,1.89e-07,64;UBERON:0001015,1.89e-07,64;UBERON:0000383,1.89e-07,64;UBERON:0004797,9.10e-07,7 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,0,0,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.492484232307152,0,0.940364164434263,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.850813354476611,0.443458794925128,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.05927344650575,1.14734648299525,0,0,0,0.24666754841716,0,0,0,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.427114777637135,0,0,0,0,0,0.168776332241266,0.487185025805993,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.579125226670317,0.410952645100767,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,2.05886054286514,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0,1.02511319404561,0,0.321707842287215,0,0.154209693802656,0.532685175939381,0.328508624055237,0,0.116210378459959,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.22021878777459,0,0.15350367472613,1.24052915236078,0,0.145016693914229,0.511359764496605,7.92385117255962,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0,0,0,1.71175595213568,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0.568209015825267,0.50313580350515,0.889811221596536,2.74608082076308,0.151230923763239,0.466311601748341,0.295710299979268,0.159296767163702,0.899606224327209,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0,0.322231671127465,0.464033759878494,0,4.80033317595784,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.11598505450025,0,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@P4HA2 | |||
}} |
Revision as of 07:17, 22 January 2014
Short description: | p10@P4HA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_P4HA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 177bp_to_ENST00000379100, ENST00000379104, NM_001017973, NM_004199, uc003kwg.2, uc003kwh.2_5end |
EntrezGene: | P4HA2 |
HGNC: | 8547 |
UniProt: | O15460 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 6.26e-12 | 1 |
cell of skeletal muscle | 2.60e-11 | 9 |
fibroblast of tunica adventitia of artery | 3.41e-11 | 4 |
fibroblast of the aortic adventitia | 3.41e-11 | 4 |
muscle precursor cell | 2.72e-08 | 58 |
myoblast | 2.72e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.72e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.41e-11 | 4 |
tunica adventitia of artery | 3.41e-11 | 4 |
adventitia | 3.41e-11 | 4 |
tunica adventitia of blood vessel | 3.41e-11 | 4 |
aorta tunica adventitia | 3.41e-11 | 4 |
aorta wall | 3.41e-11 | 4 |
skeletal muscle tissue | 1.03e-07 | 62 |
striated muscle tissue | 1.03e-07 | 62 |
myotome | 1.03e-07 | 62 |
muscle tissue | 1.89e-07 | 64 |
musculature | 1.89e-07 | 64 |
musculature of body | 1.89e-07 | 64 |
blood vessel layer | 9.10e-07 | 7 |