FFCP PHASE1:Mm9::chr16:84774546..84774559,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=67374|HGNC=|MCL_coexpression_id=2185|UniProt=Q9CWD9|association_with_transcript=-71bp_to_ENSMUST00000098407_5end|description=CAGE_peak_3_at_Jam2_5end|id=chr16:84774546..84774559,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!4.34e-10!122;UBERON:0000025!2.80e-09!114;UBERON:0004121!1.27e-07!102;UBERON:0000924!1.27e-07!102;UBERON:0006601!1.27e-07!102;UBERON:0000033!5.20e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.14e-10,122;UBERON:0000025,6.59e-10,114;UBERON:0010314,4.80e-09,92;UBERON:0002346,9.57e-07,64;UBERON:0003075,9.57e-07,64;UBERON:0007284,9.57e-07,64|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.31790010585369,1.46837401729345,0,6.1047043786525,2.85592037554813,12.0546537426056,1.95980990275508,10.062679505548,0,0,0,3.08711323243136,1.71920063963254,2.06268836910977,0.809265843438391,0.528990979272033,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,0.7104801149461,0.898800331555214,2.68952813725088,0.622137673850866,0,0,1.71390590642282,2.65042249141936,0.122490799214954,0.479227355091182,0,0,3.44755812830007,1.99688493233117,1.45074916503213,1.00636407962651,1.04182674111352,2.51264699101243,1.12552522006336,1.98637722109853,1.76777151284201,1.70846016958924,1.1183966749518,0.984440513331393,0.604572480854284,43.7695377939533,0.860423876981386,0,0,0.649776417447669,0,1.40444420131752,0.681721290312231,1.81850203222008,1.41335829804136,2.39433813620357,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.45673551887624,0,1.03909497345377,0,0.608930956624282,0.691846491768175,0.150722640552623,0.705532242814229,0.753999547978053,0.741584903203122,4.04878199375753,0,3.07357014900077,2.65009822152472,0,0,2.04946557908083,2.09446706813455,0.766371165625774,0,0,0,1.9472783122627,1.37250180845588,1.13088916901578,1.73824320192276,2.04572365864264,3.53239675751252,3.24482526135515,1.01839363850316,1.36847667671102,1.26361379216837,1.26265113531884,0.130120442962704,0.689706313300419,0.720248519221397,0.753524089178575,2.65342346690179,2.8185018462667,2.62364828767241,3.3631438196072,0,0,0.175951124163949,0,0.556094498451196,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.787056926989615,1.23413690309903,0.465067889500816,1.60964040839772,1.63471479314037,1.48103864922132,6.895033491322,7.70153690685629,6.87139940899062,7.46470391989572,9.39444931322602,1.68231958851302,1.54356918568927,0,0,0,0.232236671860439,0.128867461322093,0.605050573870028,0,0,0,0.823494773620054,0.251335208800269,0.596869416123452,1.36474860983384,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.685491075658373,0,0,0.193952487167626,0.280543279561274,0.69560190836683,0.590440591918409,0.470996183524124,1.35736880313981,1.1858105083486,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,1.48856379067401,0.936113019343682,1.51547326768267,0.179397413521912,1.92977408545347,2.03228509183265,0.189491411770485,0.162964976442026,0.339490171550376,0,1.67506257441816,0.952174563544055,3.12213836572478,1.41871629695572,1.32878813789265,1.75400245523236,1.96635977658886,1.89953480052485,2.4590339958857,0,0,0.491764273019036,0.551873492609465,5.29816946959713,5.04010252346474,0,4.54447668967871,0.631016438832513,0,1.07711698866399,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0,4.81981974632711,2.6968616189571,0.890328018336276,0.651547837414304,6.76377504187395,1.32745138339963,0.242780636154981,0.604647113929502,0,0.295301892880773,1.53717573971964,0.516856586336442,1.81766864738753,0,0.948110273807448,0,1.03135543248187,2.04263763452273,1.08036656418786,0.129358683782755,0.643011105094777,0,0.178368817602071,0.987294123612726,0.304464949114599,5.86679270159276,1.48282449604674,0.882113592219848,0.98931751764888,1.93757312035087,0.542816324353403,0.716234064018819,0.328281799490123,0.291480836629851,5.37733375830478,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.87345025498471,0.404593039154462,1.1571483801547,0,0.777689839750757,0.621339313086926,0.56369293868419,1.19613236835183,1.15820943319968,2.91676782516071,2.97067593998782,4.22390313726945,4.69428954583016,4.4269490846943,3.35549902162275,1.69108884578204,1.72818003754719,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,3.17422537061296,0,0,0,1.54551675225752,3.37828455812128,2.93042598827624,0.857473516316263,0,1.6942555278512,1.84130094602871,1.14579102687879,1.3748254587495,0,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,3.10656187051092,0.518936737920883,1.99512436700516,0.512200817262403,1.70174701947806,0.209613162627982,1.47074806760011,0.666740183404846,2.06035057238894,1.60459604795908,1.51618327058278,1.01391719956096,0.943131706930381,0.842773567228942,1.85672941974121,0.976402972245426,0.952587382566147,0.463537303779422,1.35036454324594,1.64834360321323,1.17759136107518,1.37147700954166,1.24233064311536,1.66905332963125,1.30811774969096,1.41164070622996,1.60767754994185,1.09756783723664,0.789209134313529,1.49384525230448,0.561142271657738,1.30498519936592,0.985044823755635,0,1.39443157067369,1.35034627686799,1.49886346762768,1.16965804222704,3.43793686477277,2.86932498103265,1.98532277207564,2.55054619182464|short_description=p3@Jam2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67374 | |||
|HGNC= | |||
|MCL_coexpression_id=2185 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CWD9 | |||
|association_with_transcript=-71bp_to_ENSMUST00000098407_5end | |||
|cluster_id=chr16:84774546..84774559,+ | |||
|description=CAGE_peak_3_at_Jam2_5end | |||
|id=chr16:84774546..84774559,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.34e-10!122;UBERON:0000025!2.80e-09!114;UBERON:0004121!1.27e-07!102;UBERON:0000924!1.27e-07!102;UBERON:0006601!1.27e-07!102;UBERON:0000033!5.20e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.14e-10,122;UBERON:0000025,6.59e-10,114;UBERON:0010314,4.80e-09,92;UBERON:0002346,9.57e-07,64;UBERON:0003075,9.57e-07,64;UBERON:0007284,9.57e-07,64 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.31790010585369,1.46837401729345,0,6.1047043786525,2.85592037554813,12.0546537426056,1.95980990275508,10.062679505548,0,0,0,3.08711323243136,1.71920063963254,2.06268836910977,0.809265843438391,0.528990979272033,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,0.7104801149461,0.898800331555214,2.68952813725088,0.622137673850866,0,0,1.71390590642282,2.65042249141936,0.122490799214954,0.479227355091182,0,0,3.44755812830007,1.99688493233117,1.45074916503213,1.00636407962651,1.04182674111352,2.51264699101243,1.12552522006336,1.98637722109853,1.76777151284201,1.70846016958924,1.1183966749518,0.984440513331393,0.604572480854284,43.7695377939533,0.860423876981386,0,0,0.649776417447669,0,1.40444420131752,0.681721290312231,1.81850203222008,1.41335829804136,2.39433813620357,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.45673551887624,0,1.03909497345377,0,0.608930956624282,0.691846491768175,0.150722640552623,0.705532242814229,0.753999547978053,0.741584903203122,4.04878199375753,0,3.07357014900077,2.65009822152472,0,0,2.04946557908083,2.09446706813455,0.766371165625774,0,0,0,1.9472783122627,1.37250180845588,1.13088916901578,1.73824320192276,2.04572365864264,3.53239675751252,3.24482526135515,1.01839363850316,1.36847667671102,1.26361379216837,1.26265113531884,0.130120442962704,0.689706313300419,0.720248519221397,0.753524089178575,2.65342346690179,2.8185018462667,2.62364828767241,3.3631438196072,0,0,0.175951124163949,0,0.556094498451196,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.787056926989615,1.23413690309903,0.465067889500816,1.60964040839772,1.63471479314037,1.48103864922132,6.895033491322,7.70153690685629,6.87139940899062,7.46470391989572,9.39444931322602,1.68231958851302,1.54356918568927,0,0,0,0.232236671860439,0.128867461322093,0.605050573870028,0,0,0,0.823494773620054,0.251335208800269,0.596869416123452,1.36474860983384,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.685491075658373,0,0,0.193952487167626,0.280543279561274,0.69560190836683,0.590440591918409,0.470996183524124,1.35736880313981,1.1858105083486,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,1.48856379067401,0.936113019343682,1.51547326768267,0.179397413521912,1.92977408545347,2.03228509183265,0.189491411770485,0.162964976442026,0.339490171550376,0,1.67506257441816,0.952174563544055,3.12213836572478,1.41871629695572,1.32878813789265,1.75400245523236,1.96635977658886,1.89953480052485,2.4590339958857,0,0,0.491764273019036,0.551873492609465,5.29816946959713,5.04010252346474,0,4.54447668967871,0.631016438832513,0,1.07711698866399,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0,4.81981974632711,2.6968616189571,0.890328018336276,0.651547837414304,6.76377504187395,1.32745138339963,0.242780636154981,0.604647113929502,0,0.295301892880773,1.53717573971964,0.516856586336442,1.81766864738753,0,0.948110273807448,0,1.03135543248187,2.04263763452273,1.08036656418786,0.129358683782755,0.643011105094777,0,0.178368817602071,0.987294123612726,0.304464949114599,5.86679270159276,1.48282449604674,0.882113592219848,0.98931751764888,1.93757312035087,0.542816324353403,0.716234064018819,0.328281799490123,0.291480836629851,5.37733375830478,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.87345025498471,0.404593039154462,1.1571483801547,0,0.777689839750757,0.621339313086926,0.56369293868419,1.19613236835183,1.15820943319968,2.91676782516071,2.97067593998782,4.22390313726945,4.69428954583016,4.4269490846943,3.35549902162275,1.69108884578204,1.72818003754719,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,3.17422537061296,0,0,0,1.54551675225752,3.37828455812128,2.93042598827624,0.857473516316263,0,1.6942555278512,1.84130094602871,1.14579102687879,1.3748254587495,0,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,3.10656187051092,0.518936737920883,1.99512436700516,0.512200817262403,1.70174701947806,0.209613162627982,1.47074806760011,0.666740183404846,2.06035057238894,1.60459604795908,1.51618327058278,1.01391719956096,0.943131706930381,0.842773567228942,1.85672941974121,0.976402972245426,0.952587382566147,0.463537303779422,1.35036454324594,1.64834360321323,1.17759136107518,1.37147700954166,1.24233064311536,1.66905332963125,1.30811774969096,1.41164070622996,1.60767754994185,1.09756783723664,0.789209134313529,1.49384525230448,0.561142271657738,1.30498519936592,0.985044823755635,0,1.39443157067369,1.35034627686799,1.49886346762768,1.16965804222704,3.43793686477277,2.86932498103265,1.98532277207564,2.55054619182464 | |||
|short_description=p3@Jam2 | |||
}} |
Revision as of 02:55, 4 August 2015
Short description: | p3@Jam2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jam2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2185 |
Association with transcript: | -71bp_to_ENSMUST00000098407_5end |
EntrezGene: | 67374 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.14e-10 | 122 |
tube | 6.59e-10 | 114 |
structure with developmental contribution from neural crest | 4.80e-09 | 92 |
neurectoderm | 9.57e-07 | 64 |
neural plate | 9.57e-07 | 64 |
presumptive neural plate | 9.57e-07 | 64 |